EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000524 (Gene tree)
Gene ID: 111216478
Gene Symbol: -
Alias: -
Full Name: PR domain zinc finger protein 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 8342 bases
Position: chrBDQW01000025.1:15392333-15400674
Accession: 111216478
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000625	zf-C2H2	PF00096.26	1.2e-16	1	3
ENSSDUP00000000625	zf-C2H2	PF00096.26	1.2e-16	2	3
ENSSDUP00000000625	zf-C2H2	PF00096.26	1.2e-16	3	3
ENSSDUP00000000625	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000667	-	2370	XM_022738022	ENSSDUP00000000625	789 (aa)	XP_022593743	-

Gene Model

Click here to download ENSSDUG00000000524's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000524's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000524	-	100	79.975	ENSAPOG00000014135	-	100	79.975	Acanthochromis_polyacanthus
ENSSDUG00000000524	-	100	77.722	ENSACIG00000009747	-	100	77.722	Amphilophus_citrinellus
ENSSDUG00000000524	-	74	38.548	ENSACIG00000014426	prdm1b	88	38.548	Amphilophus_citrinellus
ENSSDUG00000000524	-	53	56.442	ENSAPEG00000019826	prdm1b	54	65.714	Amphiprion_percula
ENSSDUG00000000524	-	98	79.716	ENSATEG00000014034	-	99	79.716	Anabas_testudineus
ENSSDUG00000000524	-	61	52.985	ENSATEG00000006924	prdm1b	83	52.985	Anabas_testudineus
ENSSDUG00000000524	-	75	38.486	ENSACLG00000005487	prdm1b	85	38.835	Astatotilapia_calliptera
ENSSDUG00000000524	-	99	42.652	ENSCSEG00000009707	prdm1a	99	45.387	Cynoglossus_semilaevis
ENSSDUG00000000524	-	99	43.880	ENSCVAG00000019081	prdm1a	99	45.443	Cyprinodon_variegatus
ENSSDUG00000000524	-	59	55.357	ENSCVAG00000016746	prdm1b	61	63.889	Cyprinodon_variegatus
ENSSDUG00000000524	-	80	37.931	ENSFHEG00000019848	prdm1b	96	37.931	Fundulus_heteroclitus
ENSSDUG00000000524	-	53	55.952	ENSGAFG00000016191	prdm1b	52	68.182	Gambusia_affinis
ENSSDUG00000000524	-	99	68.101	ENSGAFG00000013012	-	99	68.101	Gambusia_affinis
ENSSDUG00000000524	-	53	56.098	ENSGACG00000002716	prdm1b	63	53.962	Gasterosteus_aculeatus
ENSSDUG00000000524	-	75	38.736	ENSHBUG00000001475	prdm1b	90	38.736	Haplochromis_burtoni
ENSSDUG00000000524	-	88	39.439	ENSIPUG00000013740	prdm1b	93	39.439	Ictalurus_punctatus
ENSSDUG00000000524	-	94	44.277	ENSKMAG00000017597	prdm1a	96	44.836	Kryptolebias_marmoratus
ENSSDUG00000000524	-	99	72.911	ENSKMAG00000016247	-	99	72.911	Kryptolebias_marmoratus
ENSSDUG00000000524	-	59	57.407	ENSLBEG00000020955	prdm1b	60	67.143	Labrus_bergylta
ENSSDUG00000000524	-	65	53.115	ENSLOCG00000004978	prdm1b	66	53.115	Lepisosteus_oculatus
ENSSDUG00000000524	-	76	38.193	ENSMZEG00005026361	prdm1b	88	38.193	Maylandia_zebra
ENSSDUG00000000524	-	75	36.013	ENSMMOG00000013458	prdm1b	90	36.013	Mola_mola
ENSSDUG00000000524	-	98	80.181	ENSMALG00000000462	-	99	80.181	Monopterus_albus
ENSSDUG00000000524	-	55	56.983	ENSONIG00000013583	prdm1b	61	56.983	Oreochromis_niloticus
ENSSDUG00000000524	-	100	76.835	ENSONIG00000014709	-	100	76.835	Oreochromis_niloticus
ENSSDUG00000000524	-	54	54.601	ENSPKIG00000022335	prdm1b	68	54.601	Paramormyrops_kingsleyae
ENSSDUG00000000524	-	85	38.710	ENSPFOG00000003103	prdm1b	98	38.710	Poecilia_formosa
ENSSDUG00000000524	-	75	36.378	ENSPMEG00000007869	prdm1b	88	36.378	Poecilia_mexicana
ENSSDUG00000000524	-	93	45.211	ENSPNAG00000028442	prdm1a	92	45.211	Pygocentrus_nattereri
ENSSDUG00000000524	-	55	54.753	ENSSFOG00015021896	prdm1b	64	54.753	Scleropages_formosus
ENSSDUG00000000524	-	100	82.427	ENSSMAG00000017518	-	100	82.427	Scophthalmus_maximus
ENSSDUG00000000524	-	58	56.970	ENSSMAG00000020467	prdm1b	57	75.510	Scophthalmus_maximus
ENSSDUG00000000524	-	100	98.479	ENSSLDG00000001957	-	100	98.479	Seriola_lalandi_dorsalis
ENSSDUG00000000524	-	53	58.896	ENSSLDG00000021973	prdm1b	54	68.571	Seriola_lalandi_dorsalis
ENSSDUG00000000524	-	100	81.013	ENSSPAG00000009830	-	100	81.013	Stegastes_partitus
ENSSDUG00000000524	-	73	39.500	ENSSPAG00000000803	prdm1b	95	40.228	Stegastes_partitus
ENSSDUG00000000524	-	79	43.427	ENSTNIG00000003926	prdm1a	99	43.516	Tetraodon_nigroviridis
ENSSDUG00000000524	-	55	54.494	ENSXCOG00000018920	prdm1b	62	55.952	Xiphophorus_couchianus
ENSSDUG00000000524	-	55	54.494	ENSXMAG00000016765	prdm1b	54	68.750	Xiphophorus_maculatus