EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000686 (Gene tree)
Gene ID: 111223316
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 316-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5401 bases
Position: chrBDQW01000110.1:12643839-12649239
Accession: 111223316
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000829	zf-C2H2	PF00096.26	1.7e-16	1	3
ENSSDUP00000000829	zf-C2H2	PF00096.26	1.7e-16	2	3
ENSSDUP00000000829	zf-C2H2	PF00096.26	1.7e-16	3	3
ENSSDUP00000000829	zf-met	PF12874.7	7.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000874	-	3448	XM_022747416	ENSSDUP00000000829	520 (aa)	XP_022603137	UPI000BBE36C6

Gene Model

Click here to download ENSSDUG00000000686's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000686's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000686	-	55	30.272	ENSSDUG00000019911	-	67	31.500
ENSSDUG00000000686	-	51	36.486	ENSSDUG00000006740	-	74	32.215
ENSSDUG00000000686	-	64	42.466	ENSSDUG00000020774	-	82	42.466
ENSSDUG00000000686	-	58	35.106	ENSSDUG00000020788	-	90	35.106
ENSSDUG00000000686	-	64	32.967	ENSSDUG00000020783	-	73	32.967

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000686	-	96	46.521	ENSOMEG00000010061	-	99	46.521	Oryzias_melastigma