EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSSDUG00000000721 (Gene tree)
Gene ID: 111223960
Gene Symbol: cpeb1b
Alias: cepb1b|fd15c06|wu:fd15c06|zorba
Full Name: cytoplasmic polyadenylation element binding protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 29233 bases
Position: chrBDQW01000011.1:5570282-5599514
Accession: 111223960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001019	RRM_1	PF00076.22	1.2e-11	1	1
ENSSDUP00000001033	RRM_1	PF00076.22	1.5e-11	1	1
ENSSDUP00000001007	RRM_1	PF00076.22	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000988	-	3781	XM_022748285	ENSSDUP00000000943	561 (aa)	XP_022604006	-
ENSSDUT00000000981	-	4119	-	ENSSDUP00000000936	597 (aa)	-	-
ENSSDUT00000001066	-	2210	XM_022749421	ENSSDUP00000001019	232 (aa)	XP_022605142	-
ENSSDUT00000001007	-	1728	-	ENSSDUP00000000961	575 (aa)	-	-
ENSSDUT00000001080	-	945	XM_022749403	ENSSDUP00000001033	236 (aa)	XP_022605124	-
ENSSDUT00000001054	-	1588	-	ENSSDUP00000001007	281 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000000721's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04114	Oocyte meiosis	KEGG
sdu04914	Progesterone-mediated oocyte maturation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000721's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000721	cpeb1b	85	68.500	ENSSDUG00000010894	RBPMS	99	66.500