EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000748 (Gene tree)
Gene ID: -
Gene Symbol: sall1b
Alias: -
Full Name: sal-like protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 4183 bases
Position: chrBDQW01000417.1:394595-398777
Accession: 111233735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000913	zf-C2H2	PF00096.26	2.1e-31	1	5
ENSSDUP00000000913	zf-C2H2	PF00096.26	2.1e-31	2	5
ENSSDUP00000000913	zf-C2H2	PF00096.26	2.1e-31	3	5
ENSSDUP00000000913	zf-C2H2	PF00096.26	2.1e-31	4	5
ENSSDUP00000000913	zf-C2H2	PF00096.26	2.1e-31	5	5
ENSSDUP00000000913	zf-met	PF12874.7	1.8e-16	1	3
ENSSDUP00000000913	zf-met	PF12874.7	1.8e-16	2	3
ENSSDUP00000000913	zf-met	PF12874.7	1.8e-16	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000000958	-	3198	XM_022761619	ENSSDUP00000000913	1065 (aa)	XP_022617340	-

Gene Model

Click here to download ENSSDUG00000000748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000748's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000748	sall1b	62	42.308	ENSSDUG00000000695	-	71	42.308
ENSSDUG00000000748	sall1b	99	59.184	ENSSDUG00000006507	sall1a	82	59.184
ENSSDUG00000000748	sall1b	63	52.000	ENSSDUG00000000799	-	77	52.000
ENSSDUG00000000748	sall1b	64	38.202	ENSSDUG00000009534	-	61	56.250
ENSSDUG00000000748	sall1b	63	41.892	ENSSDUG00000006740	-	78	40.984
ENSSDUG00000000748	sall1b	62	52.000	ENSSDUG00000009601	-	88	51.786
ENSSDUG00000000748	sall1b	63	54.762	ENSSDUG00000011170	znf236	62	54.762
ENSSDUG00000000748	sall1b	67	41.509	ENSSDUG00000002195	-	99	47.727
ENSSDUG00000000748	sall1b	61	45.161	ENSSDUG00000015159	-	90	45.161
ENSSDUG00000000748	sall1b	62	50.000	ENSSDUG00000004892	-	58	50.000
ENSSDUG00000000748	sall1b	51	55.102	ENSSDUG00000004089	-	97	59.091
ENSSDUG00000000748	sall1b	61	30.625	ENSSDUG00000003003	znf319b	76	39.474
ENSSDUG00000000748	sall1b	66	44.231	ENSSDUG00000022412	znf648	55	44.231
ENSSDUG00000000748	sall1b	54	48.936	ENSSDUG00000022914	-	90	49.091
ENSSDUG00000000748	sall1b	61	39.062	ENSSDUG00000014574	znf526	59	39.062
ENSSDUG00000000748	sall1b	61	34.615	ENSSDUG00000006463	-	81	34.615
ENSSDUG00000000748	sall1b	59	80.702	ENSSDUG00000010584	sall3b	60	80.702
ENSSDUG00000000748	sall1b	63	51.020	ENSSDUG00000000946	-	98	44.595
ENSSDUG00000000748	sall1b	61	42.857	ENSSDUG00000016450	-	65	40.741
ENSSDUG00000000748	sall1b	61	51.020	ENSSDUG00000020397	prdm5	63	42.000
ENSSDUG00000000748	sall1b	52	46.000	ENSSDUG00000015013	-	67	46.000
ENSSDUG00000000748	sall1b	61	51.020	ENSSDUG00000015191	-	97	51.020
ENSSDUG00000000748	sall1b	63	49.057	ENSSDUG00000007336	-	90	49.057
ENSSDUG00000000748	sall1b	55	48.980	ENSSDUG00000000705	-	66	48.980
ENSSDUG00000000748	sall1b	50	56.818	ENSSDUG00000008943	-	98	56.818
ENSSDUG00000000748	sall1b	63	43.939	ENSSDUG00000015254	-	90	51.282
ENSSDUG00000000748	sall1b	61	44.898	ENSSDUG00000002488	-	56	44.898
ENSSDUG00000000748	sall1b	55	48.980	ENSSDUG00000020810	-	73	51.163
ENSSDUG00000000748	sall1b	86	61.905	ENSSDUG00000011099	sall3a	72	61.905
ENSSDUG00000000748	sall1b	67	48.980	ENSSDUG00000005401	-	99	48.980
ENSSDUG00000000748	sall1b	50	40.299	ENSSDUG00000020595	-	85	43.333
ENSSDUG00000000748	sall1b	62	48.214	ENSSDUG00000002174	-	74	48.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000748	sall1b	84	59.184	ENSG00000103449	SALL1	90	59.184	Homo_sapiens
ENSSDUG00000000748	sall1b	99	59.184	ENSAPOG00000022764	sall1a	76	59.184	Acanthochromis_polyacanthus
ENSSDUG00000000748	sall1b	99	57.143	ENSACIG00000004231	sall1a	90	57.143	Amphilophus_citrinellus
ENSSDUG00000000748	sall1b	99	59.184	ENSAOCG00000002800	sall1a	76	59.184	Amphiprion_ocellaris
ENSSDUG00000000748	sall1b	99	59.184	ENSAPEG00000010179	sall1a	76	59.184	Amphiprion_percula
ENSSDUG00000000748	sall1b	99	57.143	ENSATEG00000003006	sall1a	82	57.143	Anabas_testudineus
ENSSDUG00000000748	sall1b	99	59.184	ENSAPLG00000003356	SALL1	90	59.184	Anas_platyrhynchos
ENSSDUG00000000748	sall1b	95	59.184	ENSACAG00000014399	SALL1	85	59.184	Anolis_carolinensis
ENSSDUG00000000748	sall1b	84	59.184	ENSANAG00000027238	SALL1	76	59.184	Aotus_nancymaae
ENSSDUG00000000748	sall1b	99	57.143	ENSACLG00000017148	sall1a	76	57.143	Astatotilapia_calliptera
ENSSDUG00000000748	sall1b	99	59.184	ENSAMXG00000018599	sall1a	90	59.184	Astyanax_mexicanus
ENSSDUG00000000748	sall1b	84	59.184	ENSBTAG00000008544	SALL1	90	59.184	Bos_taurus
ENSSDUG00000000748	sall1b	84	59.184	ENSCJAG00000001740	SALL1	90	59.184	Callithrix_jacchus
ENSSDUG00000000748	sall1b	79	80.769	ENSCAFG00000009755	SALL1	64	80.769	Canis_familiaris
ENSSDUG00000000748	sall1b	91	59.184	ENSCAFG00020002842	SALL1	81	59.184	Canis_lupus_dingo
ENSSDUG00000000748	sall1b	99	59.184	ENSCHIG00000026074	SALL1	77	59.184	Capra_hircus
ENSSDUG00000000748	sall1b	99	59.184	ENSTSYG00000029464	SALL1	90	59.184	Carlito_syrichta
ENSSDUG00000000748	sall1b	95	59.184	ENSCPOG00000006564	SALL1	89	59.184	Cavia_porcellus
ENSSDUG00000000748	sall1b	84	59.184	ENSCCAG00000001639	SALL1	77	59.184	Cebus_capucinus
ENSSDUG00000000748	sall1b	84	59.184	ENSCATG00000004982	SALL1	76	59.184	Cercocebus_atys
ENSSDUG00000000748	sall1b	84	59.184	ENSCLAG00000006380	SALL1	90	59.184	Chinchilla_lanigera
ENSSDUG00000000748	sall1b	84	59.184	ENSCSAG00000005319	SALL1	76	59.184	Chlorocebus_sabaeus
ENSSDUG00000000748	sall1b	55	63.830	ENSCHOG00000000800	-	57	63.830	Choloepus_hoffmanni
ENSSDUG00000000748	sall1b	99	64.444	ENSCPBG00000015924	SALL1	90	59.184	Chrysemys_picta_bellii
ENSSDUG00000000748	sall1b	84	59.184	ENSCANG00000036664	SALL1	82	59.184	Colobus_angolensis_palliatus
ENSSDUG00000000748	sall1b	99	59.184	ENSCGRG00001023314	-	90	59.184	Cricetulus_griseus_chok1gshd
ENSSDUG00000000748	sall1b	95	59.184	ENSCGRG00000009496	Sall1	89	59.184	Cricetulus_griseus_crigri
ENSSDUG00000000748	sall1b	99	59.184	ENSCSEG00000009349	sall1a	90	59.184	Cynoglossus_semilaevis
ENSSDUG00000000748	sall1b	99	55.319	ENSCVAG00000020513	sall1a	99	55.319	Cyprinodon_variegatus
ENSSDUG00000000748	sall1b	99	55.556	ENSDARG00000075891	sall1b	78	59.574	Danio_rerio
ENSSDUG00000000748	sall1b	99	55.556	ENSDARG00000074319	sall1a	90	55.556	Danio_rerio
ENSSDUG00000000748	sall1b	99	59.184	ENSDNOG00000016413	SALL1	90	59.184	Dasypus_novemcinctus
ENSSDUG00000000748	sall1b	95	59.184	ENSETEG00000015150	SALL1	78	59.184	Echinops_telfairi
ENSSDUG00000000748	sall1b	65	57.447	ENSEBUG00000011732	SALL1	63	57.447	Eptatretus_burgeri
ENSSDUG00000000748	sall1b	84	59.184	ENSEASG00005014602	SALL1	90	59.184	Equus_asinus_asinus
ENSSDUG00000000748	sall1b	84	60.870	ENSECAG00000011334	SALL1	98	60.870	Equus_caballus
ENSSDUG00000000748	sall1b	70	64.444	ENSEEUG00000002014	SALL1	75	64.444	Erinaceus_europaeus
ENSSDUG00000000748	sall1b	99	43.719	ENSELUG00000017774	-	90	44.202	Esox_lucius
ENSSDUG00000000748	sall1b	88	59.615	ENSELUG00000006159	sall1a	78	59.615	Esox_lucius
ENSSDUG00000000748	sall1b	65	59.184	ENSFCAG00000024654	SALL1	90	59.184	Felis_catus
ENSSDUG00000000748	sall1b	99	59.184	ENSFALG00000000074	SALL1	90	59.184	Ficedula_albicollis
ENSSDUG00000000748	sall1b	99	55.556	ENSFHEG00000012579	sall1a	90	55.556	Fundulus_heteroclitus
ENSSDUG00000000748	sall1b	74	61.702	ENSFHEG00000008424	-	60	61.702	Fundulus_heteroclitus
ENSSDUG00000000748	sall1b	99	59.184	ENSGMOG00000006103	sall1a	76	59.799	Gadus_morhua
ENSSDUG00000000748	sall1b	80	78.947	ENSGMOG00000013383	-	66	63.830	Gadus_morhua
ENSSDUG00000000748	sall1b	99	59.184	ENSGALG00000039238	SALL1	90	59.184	Gallus_gallus
ENSSDUG00000000748	sall1b	99	59.184	ENSGACG00000016702	sall1a	90	59.184	Gasterosteus_aculeatus
ENSSDUG00000000748	sall1b	99	59.184	ENSGAGG00000013979	SALL1	90	59.184	Gopherus_agassizii
ENSSDUG00000000748	sall1b	84	59.184	ENSGGOG00000000663	SALL1	76	59.184	Gorilla_gorilla
ENSSDUG00000000748	sall1b	99	57.143	ENSHBUG00000022005	sall1a	82	57.143	Haplochromis_burtoni
ENSSDUG00000000748	sall1b	84	59.184	ENSHGLG00000004288	-	90	59.184	Heterocephalus_glaber_female
ENSSDUG00000000748	sall1b	84	59.184	ENSHGLG00100017496	SALL1	90	59.184	Heterocephalus_glaber_male
ENSSDUG00000000748	sall1b	99	59.184	ENSHCOG00000000974	sall1a	81	59.184	Hippocampus_comes
ENSSDUG00000000748	sall1b	99	57.143	ENSIPUG00000022928	sall1b	93	67.442	Ictalurus_punctatus
ENSSDUG00000000748	sall1b	99	59.184	ENSIPUG00000016265	SALL1	90	59.184	Ictalurus_punctatus
ENSSDUG00000000748	sall1b	99	59.184	ENSSTOG00000020885	SALL1	90	59.184	Ictidomys_tridecemlineatus
ENSSDUG00000000748	sall1b	99	59.184	ENSKMAG00000016681	sall1a	90	59.184	Kryptolebias_marmoratus
ENSSDUG00000000748	sall1b	96	57.895	ENSLBEG00000012207	sall1a	85	59.459	Labrus_bergylta
ENSSDUG00000000748	sall1b	99	59.184	ENSLACG00000003556	SALL1	90	59.184	Latimeria_chalumnae
ENSSDUG00000000748	sall1b	96	50.794	ENSLACG00000014018	-	59	50.794	Latimeria_chalumnae
ENSSDUG00000000748	sall1b	99	59.184	ENSLOCG00000007283	sall1b	90	60.870	Lepisosteus_oculatus
ENSSDUG00000000748	sall1b	84	65.116	ENSLAFG00000015251	SALL1	78	59.184	Loxodonta_africana
ENSSDUG00000000748	sall1b	84	59.184	ENSMFAG00000003298	SALL1	76	59.184	Macaca_fascicularis
ENSSDUG00000000748	sall1b	84	59.184	ENSMMUG00000017200	SALL1	82	59.184	Macaca_mulatta
ENSSDUG00000000748	sall1b	84	59.184	ENSMNEG00000034770	SALL1	82	59.184	Macaca_nemestrina
ENSSDUG00000000748	sall1b	84	59.184	ENSMLEG00000036406	SALL1	90	59.184	Mandrillus_leucophaeus
ENSSDUG00000000748	sall1b	99	59.184	ENSMAMG00000004164	sall1a	82	59.184	Mastacembelus_armatus
ENSSDUG00000000748	sall1b	99	57.143	ENSMZEG00005006479	sall1a	76	57.143	Maylandia_zebra
ENSSDUG00000000748	sall1b	95	59.184	ENSMGAG00000004704	SALL1	89	59.184	Meleagris_gallopavo
ENSSDUG00000000748	sall1b	99	59.184	ENSMAUG00000019093	Sall1	90	59.184	Mesocricetus_auratus
ENSSDUG00000000748	sall1b	99	59.184	ENSMICG00000036486	SALL1	90	59.184	Microcebus_murinus
ENSSDUG00000000748	sall1b	99	59.184	ENSMMOG00000016400	sall1a	81	59.184	Mola_mola
ENSSDUG00000000748	sall1b	99	57.143	ENSMODG00000013114	SALL1	77	64.444	Monodelphis_domestica
ENSSDUG00000000748	sall1b	99	59.184	ENSMALG00000013400	sall1a	90	59.184	Monopterus_albus
ENSSDUG00000000748	sall1b	84	59.184	MGP_CAROLIEiJ_G0031362	Sall1	76	59.184	Mus_caroli
ENSSDUG00000000748	sall1b	99	59.184	ENSMUSG00000031665	Sall1	76	59.184	Mus_musculus
ENSSDUG00000000748	sall1b	84	59.184	MGP_PahariEiJ_G0022961	Sall1	90	59.184	Mus_pahari
ENSSDUG00000000748	sall1b	99	59.184	MGP_SPRETEiJ_G0032480	Sall1	76	59.184	Mus_spretus
ENSSDUG00000000748	sall1b	95	59.184	ENSMPUG00000003265	SALL1	85	59.184	Mustela_putorius_furo
ENSSDUG00000000748	sall1b	95	59.184	ENSMLUG00000015541	SALL1	89	59.184	Myotis_lucifugus
ENSSDUG00000000748	sall1b	99	57.143	ENSNBRG00000009307	sall1a	82	57.143	Neolamprologus_brichardi
ENSSDUG00000000748	sall1b	84	88.571	ENSNLEG00000001008	SALL1	76	88.571	Nomascus_leucogenys
ENSSDUG00000000748	sall1b	85	64.444	ENSMEUG00000012206	SALL1	90	64.444	Notamacropus_eugenii
ENSSDUG00000000748	sall1b	57	59.184	ENSOPRG00000005645	SALL1	60	59.184	Ochotona_princeps
ENSSDUG00000000748	sall1b	84	59.184	ENSODEG00000003685	SALL1	90	59.184	Octodon_degus
ENSSDUG00000000748	sall1b	99	57.778	ENSONIG00000002831	sall1a	84	61.702	Oreochromis_niloticus
ENSSDUG00000000748	sall1b	77	84.906	ENSOANG00000013399	SALL1	83	59.184	Ornithorhynchus_anatinus
ENSSDUG00000000748	sall1b	99	59.184	ENSORLG00000013827	sall1a	90	59.184	Oryzias_latipes
ENSSDUG00000000748	sall1b	99	59.184	ENSORLG00020020570	sall1a	90	59.184	Oryzias_latipes_hni
ENSSDUG00000000748	sall1b	99	59.184	ENSORLG00015018830	sall1a	90	59.184	Oryzias_latipes_hsok
ENSSDUG00000000748	sall1b	99	59.184	ENSOMEG00000016043	sall1a	82	59.184	Oryzias_melastigma
ENSSDUG00000000748	sall1b	84	59.184	ENSOGAG00000027316	SALL1	90	59.184	Otolemur_garnettii
ENSSDUG00000000748	sall1b	97	65.116	ENSOARG00000017583	SALL1	68	65.116	Ovis_aries
ENSSDUG00000000748	sall1b	84	59.184	ENSPPAG00000035657	SALL1	77	59.184	Pan_paniscus
ENSSDUG00000000748	sall1b	84	54.545	ENSPPAG00000035136	-	87	54.545	Pan_paniscus
ENSSDUG00000000748	sall1b	65	59.184	ENSPPRG00000023283	SALL1	90	59.184	Panthera_pardus
ENSSDUG00000000748	sall1b	65	56.250	ENSPTIG00000013539	-	94	56.250	Panthera_tigris_altaica
ENSSDUG00000000748	sall1b	84	54.545	ENSPTRG00000045256	-	88	54.545	Pan_troglodytes
ENSSDUG00000000748	sall1b	84	59.184	ENSPTRG00000008108	SALL1	90	59.184	Pan_troglodytes
ENSSDUG00000000748	sall1b	84	59.184	ENSPANG00000024176	SALL1	90	59.184	Papio_anubis
ENSSDUG00000000748	sall1b	99	59.184	ENSPKIG00000005383	-	89	59.184	Paramormyrops_kingsleyae
ENSSDUG00000000748	sall1b	99	55.769	ENSPKIG00000022251	sall1a	90	55.769	Paramormyrops_kingsleyae
ENSSDUG00000000748	sall1b	99	59.184	ENSPSIG00000008582	SALL1	90	59.184	Pelodiscus_sinensis
ENSSDUG00000000748	sall1b	99	59.184	ENSPMGG00000021788	sall1a	90	59.184	Periophthalmus_magnuspinnatus
ENSSDUG00000000748	sall1b	50	63.830	ENSPMAG00000008148	sall1b	77	61.224	Petromyzon_marinus
ENSSDUG00000000748	sall1b	85	64.444	ENSPCIG00000017840	SALL1	90	64.444	Phascolarctos_cinereus
ENSSDUG00000000748	sall1b	96	59.184	ENSPFOG00000015799	sall1a	85	59.184	Poecilia_formosa
ENSSDUG00000000748	sall1b	99	59.184	ENSPLAG00000022539	sall1a	76	59.184	Poecilia_latipinna
ENSSDUG00000000748	sall1b	99	55.556	ENSPMEG00000020894	sall1a	90	55.556	Poecilia_mexicana
ENSSDUG00000000748	sall1b	99	55.556	ENSPREG00000006802	sall1a	90	55.556	Poecilia_reticulata
ENSSDUG00000000748	sall1b	84	50.000	ENSPPYG00000007345	SALL1	81	50.000	Pongo_abelii
ENSSDUG00000000748	sall1b	91	65.957	ENSPCAG00000008162	SALL1	84	65.957	Procavia_capensis
ENSSDUG00000000748	sall1b	99	59.184	ENSPCOG00000028192	SALL1	90	59.184	Propithecus_coquereli
ENSSDUG00000000748	sall1b	69	59.184	ENSPVAG00000015374	SALL1	85	59.184	Pteropus_vampyrus
ENSSDUG00000000748	sall1b	99	57.143	ENSPNYG00000010865	sall1a	76	57.143	Pundamilia_nyererei
ENSSDUG00000000748	sall1b	99	59.184	ENSPNAG00000023644	sall1a	90	59.184	Pygocentrus_nattereri
ENSSDUG00000000748	sall1b	84	59.184	ENSPNAG00000007442	sall1b	90	59.184	Pygocentrus_nattereri
ENSSDUG00000000748	sall1b	56	63.830	ENSPNAG00000028248	-	59	63.830	Pygocentrus_nattereri
ENSSDUG00000000748	sall1b	84	59.184	ENSRNOG00000013907	Sall1	90	59.184	Rattus_norvegicus
ENSSDUG00000000748	sall1b	84	59.184	ENSRBIG00000015707	SALL1	82	59.184	Rhinopithecus_bieti
ENSSDUG00000000748	sall1b	84	59.184	ENSRROG00000035777	SALL1	82	59.184	Rhinopithecus_roxellana
ENSSDUG00000000748	sall1b	84	59.184	ENSSBOG00000032186	SALL1	90	59.184	Saimiri_boliviensis_boliviensis
ENSSDUG00000000748	sall1b	85	65.116	ENSSHAG00000009477	SALL1	90	64.444	Sarcophilus_harrisii
ENSSDUG00000000748	sall1b	99	59.184	ENSSFOG00015020020	sall1a	78	59.184	Scleropages_formosus
ENSSDUG00000000748	sall1b	95	59.184	ENSSFOG00015001590	sall1a	88	59.184	Scleropages_formosus
ENSSDUG00000000748	sall1b	99	59.184	ENSSMAG00000009160	sall1a	90	59.184	Scophthalmus_maximus
ENSSDUG00000000748	sall1b	99	59.184	ENSSLDG00000017721	sall1a	76	59.184	Seriola_lalandi_dorsalis
ENSSDUG00000000748	sall1b	77	87.742	ENSSLDG00000014465	-	96	94.444	Seriola_lalandi_dorsalis
ENSSDUG00000000748	sall1b	95	59.184	ENSSARG00000000661	SALL1	89	59.184	Sorex_araneus
ENSSDUG00000000748	sall1b	99	59.184	ENSSPUG00000000156	SALL1	90	59.184	Sphenodon_punctatus
ENSSDUG00000000748	sall1b	99	59.184	ENSSPAG00000021615	sall1a	90	59.184	Stegastes_partitus
ENSSDUG00000000748	sall1b	91	59.184	ENSSSCG00000002836	SALL1	98	57.143	Sus_scrofa
ENSSDUG00000000748	sall1b	99	59.184	ENSTGUG00000007514	SALL1	90	59.184	Taeniopygia_guttata
ENSSDUG00000000748	sall1b	65	60.000	ENSTRUG00000008950	sall1a	98	59.184	Takifugu_rubripes
ENSSDUG00000000748	sall1b	99	59.184	ENSTNIG00000004257	sall1a	55	61.702	Tetraodon_nigroviridis
ENSSDUG00000000748	sall1b	65	53.846	ENSUAMG00000023379	-	79	47.222	Ursus_americanus
ENSSDUG00000000748	sall1b	91	46.753	ENSVVUG00000019383	-	83	51.923	Vulpes_vulpes
ENSSDUG00000000748	sall1b	95	59.184	ENSXETG00000018417	sall1	85	59.184	Xenopus_tropicalis
ENSSDUG00000000748	sall1b	99	31.278	ENSXETG00000017176	sall2	66	61.224	Xenopus_tropicalis
ENSSDUG00000000748	sall1b	99	59.184	ENSXMAG00000016273	sall1a	90	59.184	Xiphophorus_maculatus