EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000789 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5158 bases
Position: chrBDQW01000025.1:251513-256670
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000000970	RVT_1	PF00078.27	1.9e-46	1	1
ENSSDUP00000000970	Exo_endo_phos	PF03372.23	9.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001016	-	1701	-	ENSSDUP00000000970	566 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000000789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000789	-	55	33.232	ENSSDUG00000015364	-	71	33.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000789	-	50	37.544	ENSACAG00000000785	-	81	37.544	Anolis_carolinensis
ENSSDUG00000000789	-	50	35.862	ENSACAG00000009220	-	76	35.862	Anolis_carolinensis
ENSSDUG00000000789	-	85	34.921	ENSACAG00000029657	-	66	34.921	Anolis_carolinensis
ENSSDUG00000000789	-	50	36.268	ENSACAG00000003609	-	87	36.268	Anolis_carolinensis
ENSSDUG00000000789	-	50	34.737	ENSACAG00000001728	-	78	34.737	Anolis_carolinensis
ENSSDUG00000000789	-	50	32.759	ENSACAG00000003251	-	80	32.759	Anolis_carolinensis
ENSSDUG00000000789	-	50	36.552	ENSACAG00000004760	-	71	36.552	Anolis_carolinensis
ENSSDUG00000000789	-	91	36.186	ENSACAG00000028953	-	52	36.186	Anolis_carolinensis
ENSSDUG00000000789	-	50	36.364	ENSACAG00000008594	-	80	36.364	Anolis_carolinensis
ENSSDUG00000000789	-	50	33.448	ENSACAG00000002846	-	77	33.448	Anolis_carolinensis
ENSSDUG00000000789	-	50	34.483	ENSACAG00000007292	-	71	34.483	Anolis_carolinensis
ENSSDUG00000000789	-	50	36.014	ENSACAG00000007690	-	78	36.014	Anolis_carolinensis
ENSSDUG00000000789	-	50	33.451	ENSACAG00000009012	-	80	33.451	Anolis_carolinensis
ENSSDUG00000000789	-	50	33.101	ENSACAG00000023905	-	86	33.101	Anolis_carolinensis
ENSSDUG00000000789	-	50	34.965	ENSACAG00000015905	-	81	34.965	Anolis_carolinensis
ENSSDUG00000000789	-	50	37.193	ENSACAG00000010146	-	80	37.193	Anolis_carolinensis
ENSSDUG00000000789	-	50	36.207	ENSACAG00000009507	-	82	36.207	Anolis_carolinensis
ENSSDUG00000000789	-	50	38.462	ENSACAG00000026980	-	80	38.462	Anolis_carolinensis
ENSSDUG00000000789	-	50	34.266	ENSACAG00000017043	-	79	34.266	Anolis_carolinensis
ENSSDUG00000000789	-	94	47.802	ENSACLG00000007947	-	50	47.802	Astatotilapia_calliptera
ENSSDUG00000000789	-	94	44.475	ENSACLG00000009410	-	57	44.475	Astatotilapia_calliptera
ENSSDUG00000000789	-	93	45.304	ENSACLG00000010059	-	60	45.304	Astatotilapia_calliptera
ENSSDUG00000000789	-	92	48.588	ENSAMXG00000042337	-	61	48.588	Astyanax_mexicanus
ENSSDUG00000000789	-	58	32.831	ENSBTAG00000052711	-	97	32.831	Bos_taurus
ENSSDUG00000000789	-	95	40.106	ENSDNOG00000032631	-	50	40.106	Dasypus_novemcinctus
ENSSDUG00000000789	-	66	40.464	ENSEASG00005016488	-	50	40.464	Equus_asinus_asinus
ENSSDUG00000000789	-	96	40.979	ENSEASG00005022910	-	51	40.979	Equus_asinus_asinus
ENSSDUG00000000789	-	58	38.973	ENSECAG00000028041	-	92	38.973	Equus_caballus
ENSSDUG00000000789	-	52	39.799	ENSECAG00000028168	-	82	39.799	Equus_caballus
ENSSDUG00000000789	-	66	35.859	ENSECAG00000012123	-	55	35.859	Equus_caballus
ENSSDUG00000000789	-	93	38.462	ENSECAG00000017913	-	67	38.462	Equus_caballus
ENSSDUG00000000789	-	93	43.785	ENSKMAG00000000374	-	51	43.785	Kryptolebias_marmoratus
ENSSDUG00000000789	-	96	40.209	ENSMMUG00000039574	-	52	40.209	Macaca_mulatta
ENSSDUG00000000789	-	66	40.157	ENSMMUG00000030948	-	56	40.157	Macaca_mulatta
ENSSDUG00000000789	-	66	42.230	ENSMMUG00000047716	-	72	42.230	Macaca_mulatta
ENSSDUG00000000789	-	96	40.470	ENSMMUG00000043159	-	54	40.470	Macaca_mulatta
ENSSDUG00000000789	-	97	42.459	ENSORLG00000028439	-	59	42.459	Oryzias_latipes
ENSSDUG00000000789	-	96	43.501	ENSORLG00000022464	-	67	43.501	Oryzias_latipes
ENSSDUG00000000789	-	63	46.045	ENSORLG00000024329	-	64	46.045	Oryzias_latipes
ENSSDUG00000000789	-	55	47.771	ENSORLG00000028858	-	73	47.771	Oryzias_latipes
ENSSDUG00000000789	-	96	45.383	ENSORLG00000027816	-	54	45.383	Oryzias_latipes
ENSSDUG00000000789	-	95	41.622	ENSORLG00000023409	-	61	41.622	Oryzias_latipes
ENSSDUG00000000789	-	96	44.327	ENSORLG00000022093	-	55	44.327	Oryzias_latipes
ENSSDUG00000000789	-	63	47.458	ENSORLG00015020978	-	88	47.458	Oryzias_latipes_hsok
ENSSDUG00000000789	-	96	44.032	ENSORLG00015002019	-	63	44.032	Oryzias_latipes_hsok
ENSSDUG00000000789	-	97	38.916	ENSORLG00015011318	-	51	38.916	Oryzias_latipes_hsok
ENSSDUG00000000789	-	94	42.192	ENSPMEG00000000819	-	54	42.192	Poecilia_mexicana
ENSSDUG00000000789	-	93	40.162	ENSPMEG00000017430	-	53	40.162	Poecilia_mexicana
ENSSDUG00000000789	-	55	42.405	ENSSPUG00000004892	-	92	42.405	Sphenodon_punctatus
ENSSDUG00000000789	-	53	38.710	ENSSSCG00000032975	-	85	38.511	Sus_scrofa
ENSSDUG00000000789	-	52	41.472	ENSSSCG00000033364	-	88	41.472	Sus_scrofa