EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000855 (Gene tree)
Gene ID: 111230378
Gene Symbol: -
Alias: -
Full Name: stem-loop binding protein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7467 bases
Position: chrBDQW01000264.1:483034-490500
Accession: 111230378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001035	SLBP_RNA_bind	PF15247.6	6.6e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001082	-	2009	XM_022757089	ENSSDUP00000001035	275 (aa)	XP_022612810	UPI000BBE4A4F

Gene Model

Click here to download ENSSDUG00000000855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000855's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000855	-	74	58.049	ENSG00000163950	SLBP	75	58.904	Homo_sapiens
ENSSDUG00000000855	-	98	82.482	ENSAPOG00000004953	slbp	97	82.482	Acanthochromis_polyacanthus
ENSSDUG00000000855	-	55	61.392	ENSAMEG00000016915	SLBP	87	53.589	Ailuropoda_melanoleuca
ENSSDUG00000000855	-	93	77.821	ENSACIG00000022308	slbp	97	77.821	Amphilophus_citrinellus
ENSSDUG00000000855	-	98	83.273	ENSAOCG00000024545	slbp	97	83.273	Amphiprion_ocellaris
ENSSDUG00000000855	-	98	83.636	ENSAPEG00000017629	slbp	97	83.636	Amphiprion_percula
ENSSDUG00000000855	-	98	86.182	ENSATEG00000016358	slbp	97	86.182	Anabas_testudineus
ENSSDUG00000000855	-	74	53.431	ENSAPLG00000015989	-	87	53.659	Anas_platyrhynchos
ENSSDUG00000000855	-	77	54.505	ENSANAG00000034769	SLBP	69	63.095	Aotus_nancymaae
ENSSDUG00000000855	-	100	77.857	ENSACLG00000007036	-	100	77.857	Astatotilapia_calliptera
ENSSDUG00000000855	-	100	57.651	ENSAMXG00000014527	slbp	100	57.651	Astyanax_mexicanus
ENSSDUG00000000855	-	74	57.282	ENSBTAG00000001328	SLBP	82	50.800	Bos_taurus
ENSSDUG00000000855	-	79	53.247	ENSCJAG00000001790	SLBP	79	52.991	Callithrix_jacchus
ENSSDUG00000000855	-	74	57.282	ENSCAFG00000015016	SLBP	83	51.867	Canis_familiaris
ENSSDUG00000000855	-	74	57.282	ENSCAFG00020012334	SLBP	83	51.867	Canis_lupus_dingo
ENSSDUG00000000855	-	77	55.869	ENSCHIG00000019364	SLBP	84	49.805	Capra_hircus
ENSSDUG00000000855	-	79	52.381	ENSTSYG00000000376	SLBP	98	48.754	Carlito_syrichta
ENSSDUG00000000855	-	64	58.011	ENSCPOG00000000031	SLBP	93	48.375	Cavia_porcellus
ENSSDUG00000000855	-	74	58.049	ENSCATG00000029173	SLBP	69	63.095	Cercocebus_atys
ENSSDUG00000000855	-	61	61.404	ENSCLAG00000008157	SLBP	84	51.452	Chinchilla_lanigera
ENSSDUG00000000855	-	63	49.714	ENSCSAG00000015628	SLBP	60	49.438	Chlorocebus_sabaeus
ENSSDUG00000000855	-	88	51.737	ENSCPBG00000000746	SLBP	97	50.360	Chrysemys_picta_bellii
ENSSDUG00000000855	-	59	63.190	ENSCANG00000041008	SLBP	74	62.048	Colobus_angolensis_palliatus
ENSSDUG00000000855	-	77	55.399	ENSCGRG00001009760	-	82	50.800	Cricetulus_griseus_chok1gshd
ENSSDUG00000000855	-	83	53.043	ENSCGRG00001012991	-	89	49.434	Cricetulus_griseus_chok1gshd
ENSSDUG00000000855	-	77	55.399	ENSCGRG00000004506	Slbp	82	50.800	Cricetulus_griseus_crigri
ENSSDUG00000000855	-	98	79.336	ENSCSEG00000020337	-	98	79.336	Cynoglossus_semilaevis
ENSSDUG00000000855	-	93	72.481	ENSCVAG00000019592	-	94	72.481	Cyprinodon_variegatus
ENSSDUG00000000855	-	92	56.538	ENSDARG00000100558	slbp	83	57.308	Danio_rerio
ENSSDUG00000000855	-	77	55.046	ENSDNOG00000047539	SLBP	83	52.743	Dasypus_novemcinctus
ENSSDUG00000000855	-	59	57.317	ENSDORG00000003028	Slbp	91	63.636	Dipodomys_ordii
ENSSDUG00000000855	-	71	55.051	ENSETEG00000004641	SLBP	82	57.426	Echinops_telfairi
ENSSDUG00000000855	-	84	51.394	ENSECAG00000011689	SLBP	78	51.181	Equus_caballus
ENSSDUG00000000855	-	93	62.030	ENSELUG00000012854	slbp	93	62.030	Esox_lucius
ENSSDUG00000000855	-	74	54.634	ENSFCAG00000000169	SLBP	84	52.941	Felis_catus
ENSSDUG00000000855	-	95	49.231	ENSFALG00000010003	-	89	49.231	Ficedula_albicollis
ENSSDUG00000000855	-	70	58.883	ENSFDAG00000007592	SLBP	98	50.575	Fukomys_damarensis
ENSSDUG00000000855	-	98	71.956	ENSFHEG00000007497	slbp	99	71.587	Fundulus_heteroclitus
ENSSDUG00000000855	-	56	73.885	ENSGMOG00000015352	slbp	100	73.125	Gadus_morhua
ENSSDUG00000000855	-	95	49.425	ENSGALG00000015712	SLBP	90	49.425	Gallus_gallus
ENSSDUG00000000855	-	100	74.638	ENSGAFG00000019577	slbp	100	74.638	Gambusia_affinis
ENSSDUG00000000855	-	93	75.000	ENSGACG00000019596	slbp	94	75.000	Gasterosteus_aculeatus
ENSSDUG00000000855	-	80	56.444	ENSGAGG00000012096	SLBP	89	56.444	Gopherus_agassizii
ENSSDUG00000000855	-	74	58.049	ENSGGOG00000003167	SLBP	69	63.095	Gorilla_gorilla
ENSSDUG00000000855	-	100	78.214	ENSHBUG00000003338	-	100	78.214	Haplochromis_burtoni
ENSSDUG00000000855	-	57	56.442	ENSHGLG00000010461	-	73	50.246	Heterocephalus_glaber_female
ENSSDUG00000000855	-	56	55.484	ENSHGLG00000008313	-	73	46.445	Heterocephalus_glaber_female
ENSSDUG00000000855	-	57	56.442	ENSHGLG00100014906	-	73	50.246	Heterocephalus_glaber_male
ENSSDUG00000000855	-	69	58.763	ENSHGLG00100014018	-	91	59.184	Heterocephalus_glaber_male
ENSSDUG00000000855	-	56	56.774	ENSHGLG00100010510	-	73	47.393	Heterocephalus_glaber_male
ENSSDUG00000000855	-	98	73.801	ENSHCOG00000013425	slbp	97	73.801	Hippocampus_comes
ENSSDUG00000000855	-	89	57.028	ENSIPUG00000016780	slbp	91	56.452	Ictalurus_punctatus
ENSSDUG00000000855	-	65	59.341	ENSSTOG00000003262	SLBP	90	50.385	Ictidomys_tridecemlineatus
ENSSDUG00000000855	-	79	57.014	ENSJJAG00000002394	-	92	50.746	Jaculus_jaculus
ENSSDUG00000000855	-	79	57.014	ENSJJAG00000020549	-	75	56.696	Jaculus_jaculus
ENSSDUG00000000855	-	100	73.571	ENSKMAG00000008187	slbp	99	73.571	Kryptolebias_marmoratus
ENSSDUG00000000855	-	98	79.259	ENSLBEG00000024709	slbp	97	79.259	Labrus_bergylta
ENSSDUG00000000855	-	94	50.000	ENSLACG00000014623	SLBP	87	50.794	Latimeria_chalumnae
ENSSDUG00000000855	-	92	59.542	ENSLOCG00000011027	slbp	86	59.542	Lepisosteus_oculatus
ENSSDUG00000000855	-	79	55.066	ENSLAFG00000012933	SLBP	92	53.419	Loxodonta_africana
ENSSDUG00000000855	-	73	58.128	ENSMFAG00000030130	SLBP	65	57.419	Macaca_fascicularis
ENSSDUG00000000855	-	74	56.132	ENSMMUG00000032303	SLBP	74	61.272	Macaca_mulatta
ENSSDUG00000000855	-	53	51.613	ENSMNEG00000008082	SLBP	64	51.266	Macaca_nemestrina
ENSSDUG00000000855	-	63	61.714	ENSMLEG00000024639	SLBP	74	55.897	Mandrillus_leucophaeus
ENSSDUG00000000855	-	98	79.273	ENSMAMG00000001046	-	97	79.273	Mastacembelus_armatus
ENSSDUG00000000855	-	100	78.214	ENSMZEG00005017261	-	100	78.214	Maylandia_zebra
ENSSDUG00000000855	-	73	54.455	ENSMGAG00000013085	SLBP	87	54.455	Meleagris_gallopavo
ENSSDUG00000000855	-	82	53.947	ENSMAUG00000009490	Slbp	85	50.000	Mesocricetus_auratus
ENSSDUG00000000855	-	65	61.667	ENSMICG00000014244	SLBP	69	63.095	Microcebus_murinus
ENSSDUG00000000855	-	77	55.399	ENSMOCG00000015826	Slbp	86	58.462	Microtus_ochrogaster
ENSSDUG00000000855	-	91	67.729	ENSMMOG00000010181	slbp	92	67.729	Mola_mola
ENSSDUG00000000855	-	74	59.223	ENSMODG00000004304	SLBP	89	52.590	Monodelphis_domestica
ENSSDUG00000000855	-	98	84.727	ENSMALG00000013883	-	72	84.727	Monopterus_albus
ENSSDUG00000000855	-	77	55.869	MGP_CAROLIEiJ_G0027117	Slbp	83	59.896	Mus_caroli
ENSSDUG00000000855	-	77	55.869	ENSMUSG00000004642	Slbp	84	58.974	Mus_musculus
ENSSDUG00000000855	-	77	55.869	MGP_PahariEiJ_G0016901	Slbp	83	59.896	Mus_pahari
ENSSDUG00000000855	-	77	55.869	MGP_SPRETEiJ_G0028113	Slbp	84	59.896	Mus_spretus
ENSSDUG00000000855	-	60	50.575	ENSMPUG00000011139	SLBP	79	53.801	Mustela_putorius_furo
ENSSDUG00000000855	-	55	63.816	ENSMLUG00000004425	SLBP	82	50.000	Myotis_lucifugus
ENSSDUG00000000855	-	77	55.399	ENSNGAG00000020799	Slbp	72	55.093	Nannospalax_galili
ENSSDUG00000000855	-	85	82.353	ENSNBRG00000006044	-	90	82.353	Neolamprologus_brichardi
ENSSDUG00000000855	-	74	56.132	ENSNLEG00000000048	SLBP	69	63.095	Nomascus_leucogenys
ENSSDUG00000000855	-	59	62.424	ENSMEUG00000002501	SLBP	91	60.345	Notamacropus_eugenii
ENSSDUG00000000855	-	61	63.158	ENSODEG00000012641	SLBP	92	51.562	Octodon_degus
ENSSDUG00000000855	-	99	79.422	ENSONIG00000017469	-	99	79.422	Oreochromis_niloticus
ENSSDUG00000000855	-	60	63.855	ENSOANG00000014243	SLBP	72	63.855	Ornithorhynchus_anatinus
ENSSDUG00000000855	-	97	66.171	ENSORLG00000024887	-	96	66.171	Oryzias_latipes
ENSSDUG00000000855	-	98	64.074	ENSORLG00020007798	slbp	96	64.552	Oryzias_latipes_hni
ENSSDUG00000000855	-	97	64.684	ENSORLG00015016656	slbp	96	64.684	Oryzias_latipes_hsok
ENSSDUG00000000855	-	98	64.945	ENSOMEG00000010818	slbp	97	65.683	Oryzias_melastigma
ENSSDUG00000000855	-	76	58.095	ENSOGAG00000009750	SLBP	72	58.654	Otolemur_garnettii
ENSSDUG00000000855	-	55	65.789	ENSOARG00000016090	SLBP	87	53.589	Ovis_aries
ENSSDUG00000000855	-	74	58.049	ENSPPAG00000033300	SLBP	69	63.095	Pan_paniscus
ENSSDUG00000000855	-	75	53.365	ENSPPRG00000016897	SLBP	89	51.210	Panthera_pardus
ENSSDUG00000000855	-	73	58.128	ENSPTRG00000015832	SLBP	69	63.095	Pan_troglodytes
ENSSDUG00000000855	-	73	55.450	ENSPANG00000004932	SLBP	69	63.095	Papio_anubis
ENSSDUG00000000855	-	92	61.176	ENSPKIG00000006183	slbp	89	60.526	Paramormyrops_kingsleyae
ENSSDUG00000000855	-	88	63.223	ENSPMGG00000017684	-	99	66.667	Periophthalmus_magnuspinnatus
ENSSDUG00000000855	-	77	55.399	ENSPEMG00000018369	Slbp	82	50.800	Peromyscus_maniculatus_bairdii
ENSSDUG00000000855	-	75	55.708	ENSPCIG00000013575	SLBP	69	50.965	Phascolarctos_cinereus
ENSSDUG00000000855	-	100	75.362	ENSPFOG00000000462	slbp	100	75.362	Poecilia_formosa
ENSSDUG00000000855	-	100	75.000	ENSPLAG00000008300	slbp	100	75.000	Poecilia_latipinna
ENSSDUG00000000855	-	100	75.362	ENSPMEG00000020807	slbp	100	75.362	Poecilia_mexicana
ENSSDUG00000000855	-	100	75.725	ENSPREG00000004561	slbp	100	75.725	Poecilia_reticulata
ENSSDUG00000000855	-	74	58.049	ENSPPYG00000014529	SLBP	72	57.692	Pongo_abelii
ENSSDUG00000000855	-	65	61.667	ENSPCOG00000017399	SLBP	69	63.095	Propithecus_coquereli
ENSSDUG00000000855	-	76	53.333	ENSPVAG00000002807	SLBP	88	47.015	Pteropus_vampyrus
ENSSDUG00000000855	-	100	78.214	ENSPNYG00000005451	-	100	78.214	Pundamilia_nyererei
ENSSDUG00000000855	-	99	57.295	ENSPNAG00000018503	slbp	99	56.786	Pygocentrus_nattereri
ENSSDUG00000000855	-	77	55.869	ENSRNOG00000037162	Slbp	72	55.556	Rattus_norvegicus
ENSSDUG00000000855	-	74	58.049	ENSRBIG00000039159	SLBP	69	63.095	Rhinopithecus_bieti
ENSSDUG00000000855	-	77	57.009	ENSRROG00000030081	SLBP	76	56.221	Rhinopithecus_roxellana
ENSSDUG00000000855	-	75	55.708	ENSSHAG00000013939	SLBP	81	50.769	Sarcophilus_harrisii
ENSSDUG00000000855	-	91	61.265	ENSSFOG00015019429	slbp	89	61.265	Scleropages_formosus
ENSSDUG00000000855	-	98	85.455	ENSSMAG00000016028	-	97	85.455	Scophthalmus_maximus
ENSSDUG00000000855	-	98	71.841	ENSSLDG00000007554	-	91	71.480	Seriola_lalandi_dorsalis
ENSSDUG00000000855	-	53	99.315	ENSSLDG00000022893	-	87	99.315	Seriola_lalandi_dorsalis
ENSSDUG00000000855	-	90	46.964	ENSSPUG00000016007	SLBP	87	50.199	Sphenodon_punctatus
ENSSDUG00000000855	-	99	82.482	ENSSPAG00000004021	slbp	100	82.879	Stegastes_partitus
ENSSDUG00000000855	-	76	56.604	ENSSSCG00000008676	SLBP	84	50.980	Sus_scrofa
ENSSDUG00000000855	-	88	52.263	ENSTGUG00000010626	-	88	52.263	Taeniopygia_guttata
ENSSDUG00000000855	-	98	76.015	ENSTRUG00000000688	slbp	97	76.015	Takifugu_rubripes
ENSSDUG00000000855	-	92	70.356	ENSTNIG00000000484	-	98	70.356	Tetraodon_nigroviridis
ENSSDUG00000000855	-	69	33.508	ENSTBEG00000004085	SLBP	64	43.299	Tupaia_belangeri
ENSSDUG00000000855	-	54	60.265	ENSTTRG00000004010	-	91	54.971	Tursiops_truncatus
ENSSDUG00000000855	-	54	65.563	ENSTTRG00000010901	-	68	64.935	Tursiops_truncatus
ENSSDUG00000000855	-	79	51.852	ENSUAMG00000012990	SLBP	86	49.811	Ursus_americanus
ENSSDUG00000000855	-	76	56.190	ENSVVUG00000015578	-	83	52.697	Vulpes_vulpes
ENSSDUG00000000855	-	92	49.416	ENSXETG00000003876	slbp	88	48.810	Xenopus_tropicalis
ENSSDUG00000000855	-	95	72.727	ENSXCOG00000008275	slbp	100	72.727	Xiphophorus_couchianus
ENSSDUG00000000855	-	100	74.275	ENSXMAG00000001331	-	99	74.275	Xiphophorus_maculatus