EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000902 (Gene tree)
Gene ID: 111221229
Gene Symbol: urb2
Alias: fc13e02|si:dkey-162b3.2|wu:fc13e02
Full Name: URB2 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 16576 bases
Position: chrBDQW01000003.1:4252094-4268669
Accession: 111221229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001111	Urb2	PF10441.9	2.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001158	-	6290	XM_022744602	ENSSDUP00000001111	1697 (aa)	XP_022600323	UPI000BBED9CF

Gene Model

Click here to download ENSSDUG00000000902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000902	urb2	99	34.593	ENSG00000135763	URB2	99	61.628	Homo_sapiens
ENSSDUG00000000902	urb2	91	74.441	ENSAPOG00000000608	urb2	100	74.377	Acanthochromis_polyacanthus
ENSSDUG00000000902	urb2	100	35.099	ENSAMEG00000009206	URB2	100	34.901	Ailuropoda_melanoleuca
ENSSDUG00000000902	urb2	100	76.577	ENSAOCG00000019961	urb2	100	76.577	Amphiprion_ocellaris
ENSSDUG00000000902	urb2	100	76.694	ENSAPEG00000005263	urb2	100	76.694	Amphiprion_percula
ENSSDUG00000000902	urb2	100	77.686	ENSATEG00000020930	urb2	100	77.686	Anabas_testudineus
ENSSDUG00000000902	urb2	98	36.228	ENSAPLG00000002998	URB2	99	35.910	Anas_platyrhynchos
ENSSDUG00000000902	urb2	99	37.181	ENSACAG00000001285	URB2	99	37.239	Anolis_carolinensis
ENSSDUG00000000902	urb2	99	34.569	ENSANAG00000033963	URB2	99	34.431	Aotus_nancymaae
ENSSDUG00000000902	urb2	91	70.761	ENSACLG00000009254	urb2	100	70.569	Astatotilapia_calliptera
ENSSDUG00000000902	urb2	99	41.444	ENSAMXG00000003474	urb2	99	41.453	Astyanax_mexicanus
ENSSDUG00000000902	urb2	96	54.375	ENSBTAG00000010180	URB2	99	54.375	Bos_taurus
ENSSDUG00000000902	urb2	95	60.839	ENSCJAG00000010968	URB2	99	60.839	Callithrix_jacchus
ENSSDUG00000000902	urb2	97	48.889	ENSCAFG00000012118	URB2	99	48.889	Canis_familiaris
ENSSDUG00000000902	urb2	91	44.118	ENSCAFG00020027217	URB2	99	44.118	Canis_lupus_dingo
ENSSDUG00000000902	urb2	96	55.000	ENSCHIG00000014513	URB2	99	55.000	Capra_hircus
ENSSDUG00000000902	urb2	100	35.145	ENSTSYG00000006924	URB2	100	34.971	Carlito_syrichta
ENSSDUG00000000902	urb2	63	39.186	ENSCPOG00000020777	-	99	39.440	Cavia_porcellus
ENSSDUG00000000902	urb2	99	34.479	ENSCCAG00000023932	URB2	99	34.479	Cebus_capucinus
ENSSDUG00000000902	urb2	99	34.922	ENSCATG00000043366	URB2	99	34.785	Cercocebus_atys
ENSSDUG00000000902	urb2	99	35.727	ENSCLAG00000006268	URB2	99	35.802	Chinchilla_lanigera
ENSSDUG00000000902	urb2	99	34.489	ENSCSAG00000010599	URB2	99	34.353	Chlorocebus_sabaeus
ENSSDUG00000000902	urb2	70	42.532	ENSCHOG00000010163	URB2	70	42.532	Choloepus_hoffmanni
ENSSDUG00000000902	urb2	99	38.470	ENSCPBG00000006191	URB2	99	37.994	Chrysemys_picta_bellii
ENSSDUG00000000902	urb2	99	34.431	ENSCANG00000023711	URB2	99	34.296	Colobus_angolensis_palliatus
ENSSDUG00000000902	urb2	99	35.229	ENSCGRG00001009591	Urb2	99	35.130	Cricetulus_griseus_chok1gshd
ENSSDUG00000000902	urb2	99	35.229	ENSCGRG00000011259	Urb2	99	35.130	Cricetulus_griseus_crigri
ENSSDUG00000000902	urb2	100	60.364	ENSCSEG00000000299	urb2	100	60.070	Cynoglossus_semilaevis
ENSSDUG00000000902	urb2	100	62.111	ENSCVAG00000011011	urb2	100	62.156	Cyprinodon_variegatus
ENSSDUG00000000902	urb2	100	43.608	ENSDARG00000003217	urb2	100	62.609	Danio_rerio
ENSSDUG00000000902	urb2	91	39.206	ENSDNOG00000043064	URB2	99	31.897	Dasypus_novemcinctus
ENSSDUG00000000902	urb2	99	33.952	ENSDORG00000014975	Urb2	99	33.660	Dipodomys_ordii
ENSSDUG00000000902	urb2	96	39.437	ENSETEG00000002869	URB2	95	39.437	Echinops_telfairi
ENSSDUG00000000902	urb2	100	35.172	ENSEASG00005012060	URB2	100	35.134	Equus_asinus_asinus
ENSSDUG00000000902	urb2	93	61.379	ENSECAG00000012338	URB2	100	61.379	Equus_caballus
ENSSDUG00000000902	urb2	93	56.643	ENSEEUG00000002669	URB2	92	56.643	Erinaceus_europaeus
ENSSDUG00000000902	urb2	100	50.145	ENSELUG00000014647	urb2	100	50.087	Esox_lucius
ENSSDUG00000000902	urb2	96	52.500	ENSFCAG00000007662	URB2	99	52.500	Felis_catus
ENSSDUG00000000902	urb2	99	37.507	ENSFALG00000003385	URB2	99	37.140	Ficedula_albicollis
ENSSDUG00000000902	urb2	99	36.121	ENSFDAG00000021079	URB2	99	35.661	Fukomys_damarensis
ENSSDUG00000000902	urb2	100	62.705	ENSFHEG00000010357	urb2	100	62.991	Fundulus_heteroclitus
ENSSDUG00000000902	urb2	96	76.250	ENSGMOG00000012459	urb2	99	76.250	Gadus_morhua
ENSSDUG00000000902	urb2	99	37.802	ENSGALG00000011101	URB2	99	37.593	Gallus_gallus
ENSSDUG00000000902	urb2	100	68.310	ENSGACG00000016179	urb2	100	68.192	Gasterosteus_aculeatus
ENSSDUG00000000902	urb2	99	38.528	ENSGAGG00000021879	URB2	99	38.090	Gopherus_agassizii
ENSSDUG00000000902	urb2	99	34.651	ENSGGOG00000025643	URB2	99	34.631	Gorilla_gorilla
ENSSDUG00000000902	urb2	100	71.287	ENSHBUG00000018469	urb2	100	71.111	Haplochromis_burtoni
ENSSDUG00000000902	urb2	98	34.940	ENSHGLG00000016561	URB2	99	34.702	Heterocephalus_glaber_female
ENSSDUG00000000902	urb2	96	52.258	ENSHGLG00100001838	URB2	99	52.258	Heterocephalus_glaber_male
ENSSDUG00000000902	urb2	100	42.732	ENSIPUG00000020315	urb2	100	42.499	Ictalurus_punctatus
ENSSDUG00000000902	urb2	99	34.930	ENSSTOG00000025323	URB2	99	34.660	Ictidomys_tridecemlineatus
ENSSDUG00000000902	urb2	99	34.529	ENSJJAG00000011998	Urb2	99	34.277	Jaculus_jaculus
ENSSDUG00000000902	urb2	100	67.116	ENSKMAG00000020129	urb2	100	67.292	Kryptolebias_marmoratus
ENSSDUG00000000902	urb2	99	37.615	ENSLACG00000002038	URB2	99	37.680	Latimeria_chalumnae
ENSSDUG00000000902	urb2	99	43.998	ENSLOCG00000015462	urb2	99	43.881	Lepisosteus_oculatus
ENSSDUG00000000902	urb2	96	53.125	ENSLAFG00000012484	URB2	99	53.125	Loxodonta_africana
ENSSDUG00000000902	urb2	99	34.667	ENSMFAG00000039905	URB2	99	34.531	Macaca_fascicularis
ENSSDUG00000000902	urb2	99	34.667	ENSMMUG00000009509	URB2	99	34.531	Macaca_mulatta
ENSSDUG00000000902	urb2	99	34.667	ENSMNEG00000038762	URB2	98	38.506	Macaca_nemestrina
ENSSDUG00000000902	urb2	99	34.662	ENSMLEG00000043252	URB2	99	34.527	Mandrillus_leucophaeus
ENSSDUG00000000902	urb2	100	75.412	ENSMAMG00000020365	urb2	100	75.412	Mastacembelus_armatus
ENSSDUG00000000902	urb2	100	71.404	ENSMZEG00005011027	urb2	100	71.228	Maylandia_zebra
ENSSDUG00000000902	urb2	95	35.262	ENSMGAG00000012073	URB2	99	35.079	Meleagris_gallopavo
ENSSDUG00000000902	urb2	95	60.839	ENSMAUG00000017980	Urb2	99	60.839	Mesocricetus_auratus
ENSSDUG00000000902	urb2	100	35.075	ENSMICG00000033302	URB2	100	34.800	Microcebus_murinus
ENSSDUG00000000902	urb2	99	35.000	ENSMOCG00000020369	Urb2	99	35.038	Microtus_ochrogaster
ENSSDUG00000000902	urb2	100	78.085	ENSMALG00000006529	urb2	100	77.850	Monopterus_albus
ENSSDUG00000000902	urb2	99	34.477	ENSMUSG00000031976	Urb2	99	34.553	Mus_musculus
ENSSDUG00000000902	urb2	99	35.461	ENSMPUG00000012438	URB2	99	35.400	Mustela_putorius_furo
ENSSDUG00000000902	urb2	99	35.193	ENSNGAG00000016524	Urb2	99	35.230	Nannospalax_galili
ENSSDUG00000000902	urb2	99	34.441	ENSNLEG00000014450	URB2	99	34.304	Nomascus_leucogenys
ENSSDUG00000000902	urb2	92	45.045	ENSMEUG00000016434	URB2	92	45.045	Notamacropus_eugenii
ENSSDUG00000000902	urb2	89	80.952	ENSOPRG00000009906	URB2	87	80.952	Ochotona_princeps
ENSSDUG00000000902	urb2	99	35.839	ENSODEG00000005593	URB2	99	35.839	Octodon_degus
ENSSDUG00000000902	urb2	100	67.155	ENSONIG00000017078	urb2	100	67.116	Oreochromis_niloticus
ENSSDUG00000000902	urb2	95	51.250	ENSOANG00000013732	URB2	99	32.889	Ornithorhynchus_anatinus
ENSSDUG00000000902	urb2	100	34.901	ENSOCUG00000010700	URB2	100	34.881	Oryctolagus_cuniculus
ENSSDUG00000000902	urb2	100	63.306	ENSORLG00000010915	urb2	100	63.189	Oryzias_latipes
ENSSDUG00000000902	urb2	100	63.189	ENSORLG00020003361	urb2	100	63.072	Oryzias_latipes_hni
ENSSDUG00000000902	urb2	100	63.189	ENSORLG00015001534	urb2	100	62.896	Oryzias_latipes_hsok
ENSSDUG00000000902	urb2	100	63.503	ENSOMEG00000010076	urb2	100	63.620	Oryzias_melastigma
ENSSDUG00000000902	urb2	100	34.224	ENSOGAG00000003021	URB2	100	34.182	Otolemur_garnettii
ENSSDUG00000000902	urb2	96	55.000	ENSOARG00000003102	URB2	99	55.000	Ovis_aries
ENSSDUG00000000902	urb2	99	34.473	ENSPPAG00000040629	URB2	99	34.540	Pan_paniscus
ENSSDUG00000000902	urb2	96	52.500	ENSPPRG00000012767	URB2	99	52.500	Panthera_pardus
ENSSDUG00000000902	urb2	90	77.273	ENSPTIG00000012577	URB2	96	77.273	Panthera_tigris_altaica
ENSSDUG00000000902	urb2	99	34.820	ENSPTRG00000002092	URB2	99	34.713	Pan_troglodytes
ENSSDUG00000000902	urb2	95	38.793	ENSPANG00000002245	URB2	98	38.793	Papio_anubis
ENSSDUG00000000902	urb2	99	43.826	ENSPKIG00000005787	urb2	99	43.826	Paramormyrops_kingsleyae
ENSSDUG00000000902	urb2	99	37.233	ENSPSIG00000002690	URB2	99	37.270	Pelodiscus_sinensis
ENSSDUG00000000902	urb2	96	34.057	ENSPEMG00000019551	Urb2	100	34.116	Peromyscus_maniculatus_bairdii
ENSSDUG00000000902	urb2	99	35.540	ENSPCIG00000030071	URB2	99	35.383	Phascolarctos_cinereus
ENSSDUG00000000902	urb2	100	62.361	ENSPFOG00000014330	urb2	100	62.126	Poecilia_formosa
ENSSDUG00000000902	urb2	100	62.008	ENSPLAG00000014654	urb2	100	61.773	Poecilia_latipinna
ENSSDUG00000000902	urb2	100	62.889	ENSPMEG00000012356	urb2	100	62.654	Poecilia_mexicana
ENSSDUG00000000902	urb2	100	62.067	ENSPREG00000010268	urb2	100	61.832	Poecilia_reticulata
ENSSDUG00000000902	urb2	96	54.375	ENSPPYG00000000123	URB2	99	54.375	Pongo_abelii
ENSSDUG00000000902	urb2	100	35.328	ENSPCOG00000023537	URB2	100	35.366	Propithecus_coquereli
ENSSDUG00000000902	urb2	99	32.367	ENSPVAG00000002108	URB2	99	32.425	Pteropus_vampyrus
ENSSDUG00000000902	urb2	91	70.697	ENSPNYG00000016840	urb2	100	70.505	Pundamilia_nyererei
ENSSDUG00000000902	urb2	96	56.287	ENSPNAG00000013684	urb2	99	56.287	Pygocentrus_nattereri
ENSSDUG00000000902	urb2	99	34.884	ENSRNOG00000026853	Urb2	97	34.901	Rattus_norvegicus
ENSSDUG00000000902	urb2	99	34.783	ENSRBIG00000037937	URB2	99	34.647	Rhinopithecus_bieti
ENSSDUG00000000902	urb2	99	34.783	ENSRROG00000039854	URB2	99	34.647	Rhinopithecus_roxellana
ENSSDUG00000000902	urb2	99	34.375	ENSSBOG00000023055	URB2	99	34.375	Saimiri_boliviensis_boliviensis
ENSSDUG00000000902	urb2	94	42.689	ENSSHAG00000014735	URB2	96	42.689	Sarcophilus_harrisii
ENSSDUG00000000902	urb2	98	43.613	ENSSFOG00015015432	urb2	98	43.631	Scleropages_formosus
ENSSDUG00000000902	urb2	91	80.425	ENSSMAG00000004984	urb2	100	80.361	Scophthalmus_maximus
ENSSDUG00000000902	urb2	99	37.850	ENSSPUG00000018549	URB2	99	37.935	Sphenodon_punctatus
ENSSDUG00000000902	urb2	100	75.995	ENSSPAG00000013632	urb2	100	75.820	Stegastes_partitus
ENSSDUG00000000902	urb2	100	34.855	ENSSSCG00000010186	URB2	100	34.644	Sus_scrofa
ENSSDUG00000000902	urb2	99	36.680	ENSTGUG00000009990	URB2	99	36.448	Taeniopygia_guttata
ENSSDUG00000000902	urb2	100	62.573	ENSTRUG00000008173	urb2	100	62.339	Takifugu_rubripes
ENSSDUG00000000902	urb2	89	79.394	ENSTNIG00000017689	urb2	96	79.394	Tetraodon_nigroviridis
ENSSDUG00000000902	urb2	95	80.952	ENSTTRG00000014864	URB2	90	80.952	Tursiops_truncatus
ENSSDUG00000000902	urb2	96	51.875	ENSUAMG00000015022	URB2	99	51.875	Ursus_americanus
ENSSDUG00000000902	urb2	96	51.875	ENSUMAG00000004728	URB2	99	51.875	Ursus_maritimus
ENSSDUG00000000902	urb2	54	61.806	ENSVPAG00000001750	-	51	61.806	Vicugna_pacos
ENSSDUG00000000902	urb2	96	51.875	ENSVVUG00000006747	URB2	99	51.875	Vulpes_vulpes
ENSSDUG00000000902	urb2	99	33.487	ENSXETG00000023331	urb2	99	33.506	Xenopus_tropicalis
ENSSDUG00000000902	urb2	100	62.772	ENSXMAG00000015059	urb2	100	62.478	Xiphophorus_maculatus