EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000933 (Gene tree)
Gene ID: 111232686
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3013 bases
Position: chrBDQW01000331.1:4113418-4116430
Accession: 111232686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001172	MMR_HSR1	PF01926.23	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001220	-	1128	XM_022760312	ENSSDUP00000001172	375 (aa)	XP_022616033	-

Gene Model

Click here to download ENSSDUG00000000933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000933	arl13a	55	47.573	ENSSDUG00000005560	arl13b	63	42.063

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000933	arl13a	100	77.608	ENSACIG00000012235	arl13a	100	77.608	Amphilophus_citrinellus
ENSSDUG00000000933	arl13a	100	73.141	ENSAOCG00000024309	arl13a	96	75.300	Amphiprion_ocellaris
ENSSDUG00000000933	arl13a	100	75.000	ENSAPEG00000006626	arl13a	94	77.885	Amphiprion_percula
ENSSDUG00000000933	arl13a	100	82.124	ENSATEG00000018113	arl13a	100	82.642	Anabas_testudineus
ENSSDUG00000000933	arl13a	100	77.000	ENSACLG00000000738	arl13a	100	80.051	Astatotilapia_calliptera
ENSSDUG00000000933	arl13a	99	54.479	ENSAMXG00000021495	arl13a	98	53.995	Astyanax_mexicanus
ENSSDUG00000000933	arl13a	56	49.296	ENSCPBG00000014304	ARL13A	80	49.296	Chrysemys_picta_bellii
ENSSDUG00000000933	arl13a	54	42.439	ENSCGRG00001021947	Arl13a	53	42.439	Cricetulus_griseus_chok1gshd
ENSSDUG00000000933	arl13a	54	42.439	ENSCGRG00000007297	Arl13a	53	42.439	Cricetulus_griseus_crigri
ENSSDUG00000000933	arl13a	100	58.950	ENSCSEG00000002533	arl13a	54	80.000	Cynoglossus_semilaevis
ENSSDUG00000000933	arl13a	99	75.253	ENSCVAG00000005783	arl13a	99	68.537	Cyprinodon_variegatus
ENSSDUG00000000933	arl13a	99	61.481	ENSDARG00000052575	arl13a	93	61.235	Danio_rerio
ENSSDUG00000000933	arl13a	100	72.182	ENSFHEG00000017023	arl13a	94	70.983	Fundulus_heteroclitus
ENSSDUG00000000933	arl13a	100	75.253	ENSGAFG00000019994	arl13a	99	73.737	Gambusia_affinis
ENSSDUG00000000933	arl13a	100	71.149	ENSGACG00000017318	arl13a	99	70.120	Gasterosteus_aculeatus
ENSSDUG00000000933	arl13a	100	73.798	ENSHBUG00000016100	arl13a	94	75.962	Haplochromis_burtoni
ENSSDUG00000000933	arl13a	100	66.507	ENSHCOG00000005206	arl13a	100	64.578	Hippocampus_comes
ENSSDUG00000000933	arl13a	99	61.155	ENSIPUG00000017720	arl13a	98	60.630	Ictalurus_punctatus
ENSSDUG00000000933	arl13a	100	68.434	ENSKMAG00000001139	arl13a	94	67.952	Kryptolebias_marmoratus
ENSSDUG00000000933	arl13a	100	80.155	ENSLBEG00000028724	arl13a	99	79.897	Labrus_bergylta
ENSSDUG00000000933	arl13a	100	49.881	ENSLOCG00000015307	arl13a	52	63.043	Lepisosteus_oculatus
ENSSDUG00000000933	arl13a	100	72.010	ENSMAMG00000020385	arl13a	55	90.393	Mastacembelus_armatus
ENSSDUG00000000933	arl13a	100	73.798	ENSMZEG00005007052	arl13a	100	75.962	Maylandia_zebra
ENSSDUG00000000933	arl13a	54	43.062	ENSMAUG00000001355	-	51	42.927	Mesocricetus_auratus
ENSSDUG00000000933	arl13a	54	43.062	ENSMAUG00000010729	-	51	42.927	Mesocricetus_auratus
ENSSDUG00000000933	arl13a	99	72.165	ENSMMOG00000000880	arl13a	100	73.791	Mola_mola
ENSSDUG00000000933	arl13a	100	74.934	ENSMALG00000009029	arl13a	100	75.853	Monopterus_albus
ENSSDUG00000000933	arl13a	54	43.627	MGP_CAROLIEiJ_G0033386	Arl13a	53	43.627	Mus_caroli
ENSSDUG00000000933	arl13a	54	45.098	ENSMUSG00000052549	Arl13a	54	45.098	Mus_musculus
ENSSDUG00000000933	arl13a	54	45.098	MGP_PahariEiJ_G0031926	Arl13a	53	45.098	Mus_pahari
ENSSDUG00000000933	arl13a	54	45.098	MGP_SPRETEiJ_G0034551	Arl13a	53	45.098	Mus_spretus
ENSSDUG00000000933	arl13a	100	77.000	ENSNBRG00000021766	arl13a	100	80.051	Neolamprologus_brichardi
ENSSDUG00000000933	arl13a	99	74.217	ENSONIG00000002645	arl13a	100	76.386	Oreochromis_niloticus
ENSSDUG00000000933	arl13a	100	69.398	ENSORLG00000001425	arl13a	94	71.084	Oryzias_latipes
ENSSDUG00000000933	arl13a	100	67.470	ENSORLG00020021844	arl13a	94	70.843	Oryzias_latipes_hni
ENSSDUG00000000933	arl13a	100	69.157	ENSORLG00015011862	arl13a	100	70.843	Oryzias_latipes_hsok
ENSSDUG00000000933	arl13a	100	69.807	ENSOMEG00000015603	arl13a	94	70.290	Oryzias_melastigma
ENSSDUG00000000933	arl13a	99	53.774	ENSPKIG00000013558	arl13a	53	69.130	Paramormyrops_kingsleyae
ENSSDUG00000000933	arl13a	60	51.111	ENSPSIG00000003515	ARL13A	100	51.111	Pelodiscus_sinensis
ENSSDUG00000000933	arl13a	100	66.154	ENSPMGG00000017973	arl13a	99	68.205	Periophthalmus_magnuspinnatus
ENSSDUG00000000933	arl13a	100	69.324	ENSPFOG00000016707	arl13a	94	69.952	Poecilia_formosa
ENSSDUG00000000933	arl13a	100	74.745	ENSPLAG00000011307	arl13a	99	74.809	Poecilia_latipinna
ENSSDUG00000000933	arl13a	100	69.880	ENSPMEG00000017855	arl13a	94	70.743	Poecilia_mexicana
ENSSDUG00000000933	arl13a	100	69.157	ENSPREG00000011435	arl13a	94	70.264	Poecilia_reticulata
ENSSDUG00000000933	arl13a	100	76.750	ENSPNYG00000011485	arl13a	100	79.798	Pundamilia_nyererei
ENSSDUG00000000933	arl13a	54	44.608	ENSRNOG00000055454	Arl13a	51	44.608	Rattus_norvegicus
ENSSDUG00000000933	arl13a	79	75.000	ENSSFOG00015010065	arl13a	65	75.000	Scleropages_formosus
ENSSDUG00000000933	arl13a	100	77.556	ENSSMAG00000013557	arl13a	100	77.307	Scophthalmus_maximus
ENSSDUG00000000933	arl13a	100	85.817	ENSSLDG00000009973	arl13a	95	88.221	Seriola_lalandi_dorsalis
ENSSDUG00000000933	arl13a	100	82.400	ENSSPAG00000009109	arl13a	100	79.630	Stegastes_partitus
ENSSDUG00000000933	arl13a	99	72.388	ENSXCOG00000016270	arl13a	99	72.457	Xiphophorus_couchianus
ENSSDUG00000000933	arl13a	100	73.750	ENSXMAG00000013485	arl13a	99	73.815	Xiphophorus_maculatus