EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000000943 (Gene tree)
Gene ID: 111229678
Gene Symbol: si:dkey-10o6.2
Alias: -
Full Name: UPF0676 protein C1494.01-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5542 bases
Position: chrBDQW01000242.1:6982680-6988221
Accession: 111229678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001182	2OG-FeII_Oxy	PF03171.20	6.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001230	-	3448	XM_022756101	ENSSDUP00000001182	311 (aa)	XP_022611822	UPI000BBE0C6B

Gene Model

Click here to download ENSSDUG00000000943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000943's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000943	si:dkey-10o6.2	83	82.558	ENSAPOG00000011678	si:dkey-10o6.2	90	82.558	Acanthochromis_polyacanthus
ENSSDUG00000000943	si:dkey-10o6.2	100	81.994	ENSACIG00000011675	-	100	81.994	Amphilophus_citrinellus
ENSSDUG00000000943	si:dkey-10o6.2	97	83.444	ENSACIG00000024115	si:dkey-10o6.2	96	83.444	Amphilophus_citrinellus
ENSSDUG00000000943	si:dkey-10o6.2	99	83.117	ENSAOCG00000013068	si:dkey-10o6.2	99	83.117	Amphiprion_ocellaris
ENSSDUG00000000943	si:dkey-10o6.2	99	83.442	ENSAPEG00000011246	si:dkey-10o6.2	99	83.442	Amphiprion_percula
ENSSDUG00000000943	si:dkey-10o6.2	100	78.778	ENSATEG00000021952	si:dkey-10o6.2	100	78.778	Anabas_testudineus
ENSSDUG00000000943	si:dkey-10o6.2	100	81.994	ENSATEG00000000030	si:dkey-10o6.2	100	81.994	Anabas_testudineus
ENSSDUG00000000943	si:dkey-10o6.2	100	85.852	ENSATEG00000021945	si:dkey-10o6.2	100	85.852	Anabas_testudineus
ENSSDUG00000000943	si:dkey-10o6.2	100	83.280	ENSACLG00000023011	si:dkey-10o6.2	100	83.280	Astatotilapia_calliptera
ENSSDUG00000000943	si:dkey-10o6.2	99	66.452	ENSAMXG00000021555	si:dkey-10o6.2	99	66.452	Astyanax_mexicanus
ENSSDUG00000000943	si:dkey-10o6.2	90	36.678	ENSCING00000022311	-	88	36.678	Ciona_intestinalis
ENSSDUG00000000943	si:dkey-10o6.2	76	43.033	ENSCING00000011926	-	99	43.033	Ciona_intestinalis
ENSSDUG00000000943	si:dkey-10o6.2	99	36.086	ENSCING00000016920	-	94	36.086	Ciona_intestinalis
ENSSDUG00000000943	si:dkey-10o6.2	99	40.361	ENSCING00000007255	-	99	40.361	Ciona_intestinalis
ENSSDUG00000000943	si:dkey-10o6.2	98	33.230	ENSCING00000012500	-	97	33.230	Ciona_intestinalis
ENSSDUG00000000943	si:dkey-10o6.2	90	35.640	ENSCSAVG00000000201	-	92	33.566	Ciona_savignyi
ENSSDUG00000000943	si:dkey-10o6.2	50	38.554	ENSCSAVG00000001775	-	97	38.554	Ciona_savignyi
ENSSDUG00000000943	si:dkey-10o6.2	77	36.842	ENSCSAVG00000001337	-	99	36.842	Ciona_savignyi
ENSSDUG00000000943	si:dkey-10o6.2	98	37.092	ENSCSAVG00000004616	-	98	37.092	Ciona_savignyi
ENSSDUG00000000943	si:dkey-10o6.2	100	68.489	ENSCSEG00000000918	si:dkey-10o6.2	99	68.489	Cynoglossus_semilaevis
ENSSDUG00000000943	si:dkey-10o6.2	100	71.061	ENSCSEG00000000927	si:dkey-10o6.2	100	71.061	Cynoglossus_semilaevis
ENSSDUG00000000943	si:dkey-10o6.2	100	78.778	ENSCVAG00000015074	si:dkey-10o6.2	100	78.778	Cyprinodon_variegatus
ENSSDUG00000000943	si:dkey-10o6.2	99	67.638	ENSDARG00000074628	si:dkey-10o6.2	88	67.638	Danio_rerio
ENSSDUG00000000943	si:dkey-10o6.2	92	33.333	FBgn0053093	CG33093	86	33.333	Drosophila_melanogaster
ENSSDUG00000000943	si:dkey-10o6.2	99	32.198	FBgn0053099	CG33099	94	32.198	Drosophila_melanogaster
ENSSDUG00000000943	si:dkey-10o6.2	99	74.598	ENSELUG00000003488	si:dkey-10o6.2	99	74.598	Esox_lucius
ENSSDUG00000000943	si:dkey-10o6.2	100	76.206	ENSFHEG00000019035	si:dkey-10o6.2	100	76.206	Fundulus_heteroclitus
ENSSDUG00000000943	si:dkey-10o6.2	97	69.079	ENSGMOG00000018989	si:dkey-10o6.2	100	69.079	Gadus_morhua
ENSSDUG00000000943	si:dkey-10o6.2	100	75.563	ENSGAFG00000006137	si:dkey-10o6.2	100	75.563	Gambusia_affinis
ENSSDUG00000000943	si:dkey-10o6.2	99	73.913	ENSGACG00000006806	si:dkey-10o6.2	99	73.913	Gasterosteus_aculeatus
ENSSDUG00000000943	si:dkey-10o6.2	100	83.280	ENSHBUG00000008853	si:dkey-10o6.2	100	83.280	Haplochromis_burtoni
ENSSDUG00000000943	si:dkey-10o6.2	100	71.474	ENSHCOG00000017671	-	100	71.474	Hippocampus_comes
ENSSDUG00000000943	si:dkey-10o6.2	100	77.885	ENSHCOG00000017626	si:dkey-10o6.2	100	77.885	Hippocampus_comes
ENSSDUG00000000943	si:dkey-10o6.2	99	68.285	ENSIPUG00000018911	-	99	68.285	Ictalurus_punctatus
ENSSDUG00000000943	si:dkey-10o6.2	99	68.285	ENSIPUG00000018879	si:dkey-10o6.2	91	67.638	Ictalurus_punctatus
ENSSDUG00000000943	si:dkey-10o6.2	99	71.935	ENSKMAG00000006197	si:dkey-10o6.2	99	71.935	Kryptolebias_marmoratus
ENSSDUG00000000943	si:dkey-10o6.2	100	69.453	ENSLBEG00000003823	si:dkey-10o6.2	91	69.453	Labrus_bergylta
ENSSDUG00000000943	si:dkey-10o6.2	99	75.325	ENSLBEG00000003839	si:dkey-10o6.2	99	75.325	Labrus_bergylta
ENSSDUG00000000943	si:dkey-10o6.2	100	78.526	ENSMAMG00000023020	si:dkey-10o6.2	100	78.526	Mastacembelus_armatus
ENSSDUG00000000943	si:dkey-10o6.2	100	77.244	ENSMAMG00000023022	si:dkey-10o6.2	100	77.244	Mastacembelus_armatus
ENSSDUG00000000943	si:dkey-10o6.2	100	77.244	ENSMAMG00000023026	-	100	77.244	Mastacembelus_armatus
ENSSDUG00000000943	si:dkey-10o6.2	100	75.962	ENSMAMG00000023025	-	100	75.962	Mastacembelus_armatus
ENSSDUG00000000943	si:dkey-10o6.2	100	82.958	ENSMZEG00005012018	si:dkey-10o6.2	100	82.958	Maylandia_zebra
ENSSDUG00000000943	si:dkey-10o6.2	99	70.833	ENSMMOG00000020383	si:dkey-10o6.2	97	70.833	Mola_mola
ENSSDUG00000000943	si:dkey-10o6.2	100	77.316	ENSMALG00000011300	si:dkey-10o6.2	100	77.316	Monopterus_albus
ENSSDUG00000000943	si:dkey-10o6.2	100	76.849	ENSNBRG00000015840	si:dkey-10o6.2	100	76.849	Neolamprologus_brichardi
ENSSDUG00000000943	si:dkey-10o6.2	100	83.601	ENSONIG00000015572	si:dkey-10o6.2	100	83.601	Oreochromis_niloticus
ENSSDUG00000000943	si:dkey-10o6.2	100	69.231	ENSORLG00000001314	si:dkey-10o6.2	100	69.231	Oryzias_latipes
ENSSDUG00000000943	si:dkey-10o6.2	100	69.231	ENSORLG00020002660	si:dkey-10o6.2	100	69.231	Oryzias_latipes_hni
ENSSDUG00000000943	si:dkey-10o6.2	99	68.810	ENSOMEG00000003617	si:dkey-10o6.2	97	68.810	Oryzias_melastigma
ENSSDUG00000000943	si:dkey-10o6.2	99	66.881	ENSPKIG00000024109	-	98	66.881	Paramormyrops_kingsleyae
ENSSDUG00000000943	si:dkey-10o6.2	99	66.343	ENSPKIG00000004206	si:dkey-10o6.2	80	66.343	Paramormyrops_kingsleyae
ENSSDUG00000000943	si:dkey-10o6.2	99	66.343	ENSPKIG00000004183	si:dkey-10o6.2	86	66.343	Paramormyrops_kingsleyae
ENSSDUG00000000943	si:dkey-10o6.2	99	58.934	ENSPMGG00000021603	si:dkey-10o6.2	99	58.934	Periophthalmus_magnuspinnatus
ENSSDUG00000000943	si:dkey-10o6.2	98	73.203	ENSPFOG00000017244	si:dkey-10o6.2	97	73.203	Poecilia_formosa
ENSSDUG00000000943	si:dkey-10o6.2	99	73.052	ENSPLAG00000008037	si:dkey-10o6.2	99	73.052	Poecilia_latipinna
ENSSDUG00000000943	si:dkey-10o6.2	70	75.229	ENSPMEG00000020748	si:dkey-10o6.2	96	75.943	Poecilia_mexicana
ENSSDUG00000000943	si:dkey-10o6.2	99	69.677	ENSPREG00000005108	si:dkey-10o6.2	99	69.677	Poecilia_reticulata
ENSSDUG00000000943	si:dkey-10o6.2	100	82.958	ENSPNYG00000010698	si:dkey-10o6.2	100	82.958	Pundamilia_nyererei
ENSSDUG00000000943	si:dkey-10o6.2	89	63.669	ENSPNAG00000014485	-	84	63.669	Pygocentrus_nattereri
ENSSDUG00000000943	si:dkey-10o6.2	99	68.371	ENSPNAG00000014123	si:dkey-10o6.2	98	68.371	Pygocentrus_nattereri
ENSSDUG00000000943	si:dkey-10o6.2	97	67.219	ENSSFOG00015015345	si:dkey-10o6.2	98	67.219	Scleropages_formosus
ENSSDUG00000000943	si:dkey-10o6.2	100	81.350	ENSSMAG00000019016	si:dkey-10o6.2	100	81.350	Scophthalmus_maximus
ENSSDUG00000000943	si:dkey-10o6.2	100	99.678	ENSSLDG00000003462	si:dkey-10o6.2	100	99.678	Seriola_lalandi_dorsalis
ENSSDUG00000000943	si:dkey-10o6.2	99	82.468	ENSSPAG00000020962	si:dkey-10o6.2	99	82.468	Stegastes_partitus
ENSSDUG00000000943	si:dkey-10o6.2	99	66.667	ENSTRUG00000019532	si:dkey-10o6.2	99	66.667	Takifugu_rubripes
ENSSDUG00000000943	si:dkey-10o6.2	100	72.436	ENSXCOG00000000855	si:dkey-10o6.2	100	72.436	Xiphophorus_couchianus
ENSSDUG00000000943	si:dkey-10o6.2	100	74.277	ENSXMAG00000012432	si:dkey-10o6.2	100	74.277	Xiphophorus_maculatus