EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSDUG00000000946 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
-
Gene Type
protein_coding
Species
Seriola_dumerili
Status
putative
Strand
Minus strand
Length
27335 bases
Position
chrBDQW01000110.1:12708964-12736298
Accession
-
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63112
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63212
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63312
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63412
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63512
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63612
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63712
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63812
ENSSDUP00000001686zf-C2H2PF00096.261.8e-63912
ENSSDUP00000001686zf-C2H2PF00096.261.8e-631012
ENSSDUP00000001686zf-C2H2PF00096.261.8e-631112
ENSSDUP00000001686zf-C2H2PF00096.261.8e-631212
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5019
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5029
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5039
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5049
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5059
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5069
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5079
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5089
ENSSDUP00000001218zf-C2H2PF00096.261.7e-5099
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49110
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49210
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49310
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49410
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49510
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49610
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49710
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49810
ENSSDUP00000001542zf-C2H2PF00096.262.3e-49910
ENSSDUP00000001542zf-C2H2PF00096.262.3e-491010
ENSSDUP00000001699zf-C2H2PF00096.261e-4419
ENSSDUP00000001699zf-C2H2PF00096.261e-4429
ENSSDUP00000001699zf-C2H2PF00096.261e-4439
ENSSDUP00000001699zf-C2H2PF00096.261e-4449
ENSSDUP00000001699zf-C2H2PF00096.261e-4459
ENSSDUP00000001699zf-C2H2PF00096.261e-4469
ENSSDUP00000001699zf-C2H2PF00096.261e-4479
ENSSDUP00000001699zf-C2H2PF00096.261e-4489
ENSSDUP00000001699zf-C2H2PF00096.261e-4499
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3517
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3527
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3537
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3547
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3557
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3567
ENSSDUP00000001292zf-C2H2PF00096.266.2e-3577
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3316
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3326
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3336
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3346
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3356
ENSSDUP00000001592zf-C2H2PF00096.265.9e-3366
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3316
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3326
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3336
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3346
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3356
ENSSDUP00000001392zf-C2H2PF00096.266.8e-3366
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3116
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3126
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3136
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3146
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3156
ENSSDUP00000001437zf-C2H2PF00096.262.2e-3166
ENSSDUP00000001686zf-metPF12874.71e-2211
ENSSDUP00000001699zf-metPF12874.71.1e-1412
ENSSDUP00000001699zf-metPF12874.71.1e-1422
ENSSDUP00000001542zf-metPF12874.71.7e-1311
ENSSDUP00000001292zf-metPF12874.71.3e-1111
ENSSDUP00000001392zf-metPF12874.71.4e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSDUT00000001759-1326-ENSSDUP00000001699441 (aa)--
ENSSDUT00000001344-1092-ENSSDUP00000001292363 (aa)--
ENSSDUT00000001599-1221-ENSSDUP00000001542406 (aa)--
ENSSDUT00000001492-924-ENSSDUP00000001437307 (aa)--
ENSSDUT00000001447-909-ENSSDUP00000001392302 (aa)--
ENSSDUT00000001746-1713-ENSSDUP00000001686570 (aa)--
ENSSDUT00000001649-963-ENSSDUP00000001592320 (aa)--
ENSSDUT00000001266-1287-ENSSDUP00000001218428 (aa)--
Gene Model
Click here to download ENSSDUG00000000946's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000946's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSDUG00000000946-9553.947ENSSDUG00000004867-9949.383
ENSSDUG00000000946-9951.064ENSSDUG00000005401-9653.191
ENSSDUG00000000946-9846.725ENSSDUG00000020595-9644.538
ENSSDUG00000000946-9947.500ENSSDUG00000009563-9947.222
ENSSDUG00000000946-9934.247ENSSDUG00000020397prdm59534.247
ENSSDUG00000000946-9643.925ENSSDUG00000022701znf6525739.091
ENSSDUG00000000946-9545.082ENSSDUG00000000871-9447.863
ENSSDUG00000000946-9748.980ENSSDUG00000014540znf3415045.098
ENSSDUG00000000946-9954.491ENSSDUG00000006808-8454.545
ENSSDUG00000000946-10050.973ENSSDUG00000009601-9950.579
ENSSDUG00000000946-9539.175ENSSDUG00000004449zbtb485733.651
ENSSDUG00000000946-9950.775ENSSDUG00000015182-8450.775
ENSSDUG00000000946-9444.595ENSSDUG00000011604gfi1b6944.375
ENSSDUG00000000946-9442.857ENSSDUG00000018060snai28042.857
ENSSDUG00000000946-9857.609ENSSDUG00000000889-8058.889
ENSSDUG00000000946-9931.579ENSSDUG00000002675znf6469931.579
ENSSDUG00000000946-9546.053ENSSDUG00000007752scrt1b5346.512
ENSSDUG00000000946-10047.577ENSSDUG00000004835-8946.018
ENSSDUG00000000946-9949.071ENSSDUG00000009534-8180.645
ENSSDUG00000000946-9651.709ENSSDUG00000020805-9449.321
ENSSDUG00000000946-8841.558ENSSDUG00000009846ovol1a6043.902
ENSSDUG00000000946-9650.000ENSSDUG00000004657sall45941.270
ENSSDUG00000000946-9649.171ENSSDUG00000004650-9752.356
ENSSDUG00000000946-9838.753ENSSDUG00000003003znf319b9037.500
ENSSDUG00000000946-9948.361ENSSDUG00000022162-7848.361
ENSSDUG00000000946-9836.364ENSSDUG00000014574znf5266342.857
ENSSDUG00000000946-9944.509ENSSDUG00000015622-9847.368
ENSSDUG00000000946-9643.919ENSSDUG00000011654gfi1aa5337.671
ENSSDUG00000000946-9634.328ENSSDUG00000009223zbtb415338.028
ENSSDUG00000000946-9938.346ENSSDUG00000013048-6743.165
ENSSDUG00000000946-9449.254ENSSDUG00000013904-9047.692
ENSSDUG00000000946-9737.419ENSSDUG00000004144znf710b5239.286
ENSSDUG00000000946-9950.794ENSSDUG00000011244-8947.368
ENSSDUG00000000946-9655.814ENSSDUG00000009421-9947.727
ENSSDUG00000000946-9550.420ENSSDUG00000009425-7750.420
ENSSDUG00000000946-9850.602ENSSDUG00000023765-9646.491
ENSSDUG00000000946-9850.000ENSSDUG00000023764-9847.679
ENSSDUG00000000946-9548.235ENSSDUG00000002174-7148.235
ENSSDUG00000000946-9948.410ENSSDUG00000015204-9551.818
ENSSDUG00000000946-9945.349ENSSDUG00000004892-9545.763
ENSSDUG00000000946-9846.835ENSSDUG00000015013-6446.835
ENSSDUG00000000946-9847.137ENSSDUG00000009553-8147.482
ENSSDUG00000000946-9850.588ENSSDUG00000006426-9950.588
ENSSDUG00000000946-9240.741ENSSDUG00000010305-7132.576
ENSSDUG00000000946-9545.690ENSSDUG00000006740-9439.865
ENSSDUG00000000946-9555.102ENSSDUG00000000905-6143.038
ENSSDUG00000000946-9851.948ENSSDUG00000000786-10050.000
ENSSDUG00000000946-9950.000ENSSDUG00000015191-9950.000
ENSSDUG00000000946-9950.667ENSSDUG00000011170znf2367350.667
ENSSDUG00000000946-9951.389ENSSDUG00000015254-9746.377
ENSSDUG00000000946-9438.961ENSSDUG00000015931si:dkey-89b17.49635.632
ENSSDUG00000000946-9375.000ENSSDUG00000020783-5875.000
ENSSDUG00000000946-9551.786ENSSDUG00000020788-9647.087
ENSSDUG00000000946-9548.000ENSSDUG00000004089-9648.810
ENSSDUG00000000946-9959.664ENSSDUG00000000838-7758.571
ENSSDUG00000000946-9948.780ENSSDUG00000008682-9852.459
ENSSDUG00000000946-9942.640ENSSDUG00000022170zbtb495342.640
ENSSDUG00000000946-9832.292ENSSDUG00000001918znf3666232.850
ENSSDUG00000000946-9436.885ENSSDUG00000013335-9336.885
ENSSDUG00000000946-9950.000ENSSDUG00000022914-7838.378
ENSSDUG00000000946-9043.697ENSSDUG00000002488-7348.980
ENSSDUG00000000946-9633.663ENSSDUG00000018835PRDM155135.260
ENSSDUG00000000946-10046.286ENSSDUG00000022035-8448.936
ENSSDUG00000000946-9346.377ENSSDUG00000019933snai1a5643.836
ENSSDUG00000000946-9638.621ENSSDUG00000019932ZNF3199238.730
ENSSDUG00000000946-9637.730ENSSDUG00000000705-6839.062
ENSSDUG00000000946-9947.465ENSSDUG00000009577-8148.918
ENSSDUG00000000946-9972.500ENSSDUG00000020810-7472.500
ENSSDUG00000000946-9558.696ENSSDUG00000020774-8450.526
ENSSDUG00000000946-9947.959ENSSDUG00000009439-9949.007
ENSSDUG00000000946-9834.807ENSSDUG00000016734-7240.000
ENSSDUG00000000946-9350.420ENSSDUG00000012926-8250.420
ENSSDUG00000000946-9946.087ENSSDUG00000008329-8246.087
ENSSDUG00000000946-9949.708ENSSDUG00000008943-10049.000
ENSSDUG00000000946-9737.963ENSSDUG00000021415si:ch211-216l23.19632.727
ENSSDUG00000000946-9848.795ENSSDUG00000000695-8444.068
ENSSDUG00000000946-9436.585ENSSDUG00000017250-5838.739
ENSSDUG00000000946-9447.826ENSSDUG00000000799-7847.826
ENSSDUG00000000946-9956.627ENSSDUG00000002195-9351.724
ENSSDUG00000000946-9943.258ENSSDUG00000001263-9743.820
ENSSDUG00000000946-9842.188ENSSDUG00000016450-7342.188
ENSSDUG00000000946-9844.444ENSSDUG00000009948ZBTB145041.667
ENSSDUG00000000946-9954.545ENSSDUG00000019911-7755.851
ENSSDUG00000000946-9552.632ENSSDUG00000010584sall3b8448.980
ENSSDUG00000000946-9545.902ENSSDUG00000006463-9945.902
ENSSDUG00000000946-9535.570ENSSDUG00000001637scrt26034.225
ENSSDUG00000000946-9644.280ENSSDUG00000005323-9250.704
ENSSDUG00000000946-9844.595ENSSDUG00000000748sall1b6351.020
ENSSDUG00000000946-9845.548ENSSDUG00000015159-8851.111
ENSSDUG00000000946-9756.897ENSSDUG00000022410gfi1ab5237.500
ENSSDUG00000000946-9838.699ENSSDUG00000022412znf6487638.532
ENSSDUG00000000946-10049.115ENSSDUG00000007336-9849.115
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSDUG00000000946-9548.148ENSACIG00000017166-8939.706Amphilophus_citrinellus
ENSSDUG00000000946-9642.157ENSAOCG00000018579-9342.157Amphiprion_ocellaris
ENSSDUG00000000946-9540.650ENSAPEG00000019755-10037.281Amphiprion_percula
ENSSDUG00000000946-9939.791ENSAPEG00000007889-9637.118Amphiprion_percula
ENSSDUG00000000946-9637.778ENSAMXG00000032845-6641.176Astyanax_mexicanus
ENSSDUG00000000946-9733.607WBGene00021374Y37E11B.19641.667Caenorhabditis_elegans
ENSSDUG00000000946-10035.983ENSCING00000005713-8232.995Ciona_intestinalis
ENSSDUG00000000946-9932.824ENSCING00000000529zf(btb/c2h2)6035.156Ciona_intestinalis
ENSSDUG00000000946-9031.765ENSCING00000003384-9431.765Ciona_intestinalis
ENSSDUG00000000946-9634.483ENSCING00000004861zf(c2h2)-128336.508Ciona_intestinalis
ENSSDUG00000000946-9745.946ENSCSAVG00000003895-9955.556Ciona_savignyi
ENSSDUG00000000946-9736.697ENSCSAVG00000005896-7735.811Ciona_savignyi
ENSSDUG00000000946-9636.697ENSCSAVG00000006729-7736.697Ciona_savignyi
ENSSDUG00000000946-9443.931ENSCSAVG00000009574-9943.931Ciona_savignyi
ENSSDUG00000000946-9735.772ENSCSEG00000005491-9235.652Cynoglossus_semilaevis
ENSSDUG00000000946-9841.270ENSCVAG00000016098-9940.467Cyprinodon_variegatus
ENSSDUG00000000946-9949.425ENSCVAG00000002295-9847.959Cyprinodon_variegatus
ENSSDUG00000000946-9036.567ENSCVAG00000019574-8745.714Cyprinodon_variegatus
ENSSDUG00000000946-9739.823ENSCVAG00000002502-9940.179Cyprinodon_variegatus
ENSSDUG00000000946-9936.648ENSDARG00000012642si:ch211-266d19.49641.758Danio_rerio
ENSSDUG00000000946-8432.530FBgn0040366CG113987631.250Drosophila_melanogaster
ENSSDUG00000000946-9535.417FBgn0037722CG83196935.417Drosophila_melanogaster
ENSSDUG00000000946-9534.902FBgn0030012CG182626534.444Drosophila_melanogaster
ENSSDUG00000000946-9743.182FBgn0028895CG173285248.077Drosophila_melanogaster
ENSSDUG00000000946-9840.462FBgn0033934CG173859138.393Drosophila_melanogaster
ENSSDUG00000000946-9847.287ENSEBUG00000000735-9851.442Eptatretus_burgeri
ENSSDUG00000000946-9843.151ENSEBUG00000004841-8449.587Eptatretus_burgeri
ENSSDUG00000000946-9847.559ENSEBUG00000015522-7150.147Eptatretus_burgeri
ENSSDUG00000000946-9949.083ENSEBUG00000008392-8349.083Eptatretus_burgeri
ENSSDUG00000000946-9840.625ENSELUG00000020794-6742.982Esox_lucius
ENSSDUG00000000946-9143.066ENSFHEG00000003596-7441.880Fundulus_heteroclitus
ENSSDUG00000000946-9952.174ENSFHEG00000013644-9450.661Fundulus_heteroclitus
ENSSDUG00000000946-9938.235ENSFHEG00000012990-9940.722Fundulus_heteroclitus
ENSSDUG00000000946-9846.914ENSFHEG00000020889-8340.690Fundulus_heteroclitus
ENSSDUG00000000946-9642.500ENSFHEG00000007344-5342.336Fundulus_heteroclitus
ENSSDUG00000000946-9151.316ENSGACG00000018415-9951.316Gasterosteus_aculeatus
ENSSDUG00000000946-8943.411ENSHCOG00000001313-7444.660Hippocampus_comes
ENSSDUG00000000946-9841.176ENSHCOG00000008181-8446.341Hippocampus_comes
ENSSDUG00000000946-9948.261ENSHCOG00000014881-9043.852Hippocampus_comes
ENSSDUG00000000946-9946.296ENSHCOG00000014887-7746.296Hippocampus_comes
ENSSDUG00000000946-9948.810ENSHCOG00000017437-9245.545Hippocampus_comes
ENSSDUG00000000946-9638.286ENSHCOG00000014891-5736.932Hippocampus_comes
ENSSDUG00000000946-9845.455ENSIPUG00000013526-8645.455Ictalurus_punctatus
ENSSDUG00000000946-9539.080ENSKMAG00000007658-8744.828Kryptolebias_marmoratus
ENSSDUG00000000946-9552.632ENSKMAG00000011202-5737.931Kryptolebias_marmoratus
ENSSDUG00000000946-9739.779ENSKMAG00000012909-8942.262Kryptolebias_marmoratus
ENSSDUG00000000946-7740.845ENSLBEG00000026573-9333.071Labrus_bergylta
ENSSDUG00000000946-9040.580ENSMMOG00000001961-9640.580Mola_mola
ENSSDUG00000000946-9834.884ENSMALG00000013521-8931.818Monopterus_albus
ENSSDUG00000000946-9556.098ENSMALG00000000650-7843.590Monopterus_albus
ENSSDUG00000000946-9739.062ENSONIG00000003471-10045.133Oreochromis_niloticus
ENSSDUG00000000946-9371.053ENSONIG00000007812-9954.106Oreochromis_niloticus
ENSSDUG00000000946-9643.860ENSONIG00000003224-9843.860Oreochromis_niloticus
ENSSDUG00000000946-9937.647ENSONIG00000016416-9840.964Oreochromis_niloticus
ENSSDUG00000000946-9539.759ENSONIG00000009894-10045.783Oreochromis_niloticus
ENSSDUG00000000946-8948.333ENSORLG00015018254-9248.333Oryzias_latipes_hsok
ENSSDUG00000000946-9743.333ENSOMEG00000017673-8143.333Oryzias_melastigma
ENSSDUG00000000946-9943.396ENSPMGG00000000218-7446.512Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9431.776ENSPMGG00000013602-9331.776Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9642.197ENSPMGG00000000489-9540.000Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9455.714ENSPMGG00000022524-9948.485Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9548.333ENSPMGG00000019842-7148.333Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9944.762ENSPMGG00000000458-9747.059Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9941.463ENSPMGG00000012289-7541.463Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9343.750ENSPMGG00000010664-9943.750Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9936.719ENSPMGG00000010563-8336.719Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9554.023ENSPMGG00000000243-9454.023Periophthalmus_magnuspinnatus
ENSSDUG00000000946-9946.903ENSPMAG00000007983-9945.833Petromyzon_marinus
ENSSDUG00000000946-9439.665ENSPFOG00000020691-9140.244Poecilia_formosa
ENSSDUG00000000946-9650.216ENSPFOG00000002879-10050.216Poecilia_formosa
ENSSDUG00000000946-9849.383ENSPLAG00000011254-7841.379Poecilia_latipinna
ENSSDUG00000000946-9945.122ENSPLAG00000006174-8948.500Poecilia_latipinna
ENSSDUG00000000946-9242.336ENSPMEG00000019229-6743.363Poecilia_mexicana
ENSSDUG00000000946-9746.974ENSPMEG00000022676-9950.000Poecilia_mexicana
ENSSDUG00000000946-9849.383ENSPMEG00000007503-8938.690Poecilia_mexicana
ENSSDUG00000000946-9434.868ENSPMEG00000021927-6534.868Poecilia_mexicana
ENSSDUG00000000946-9241.606ENSPREG00000007146-6739.109Poecilia_reticulata
ENSSDUG00000000946-9951.852ENSPREG00000016204-8147.875Poecilia_reticulata
ENSSDUG00000000946-9549.383ENSPREG00000015352-9534.783Poecilia_reticulata
ENSSDUG00000000946-9932.961ENSPNAG00000025211-8132.961Pygocentrus_nattereri
ENSSDUG00000000946-7731.532ENSSMAG00000001359-8931.532Scophthalmus_maximus
ENSSDUG00000000946-9433.333ENSSMAG00000000404-9638.037Scophthalmus_maximus
ENSSDUG00000000946-9730.435ENSSLDG00000015796-8930.435Seriola_lalandi_dorsalis
ENSSDUG00000000946-9959.375ENSSLDG00000002515-9240.000Seriola_lalandi_dorsalis
ENSSDUG00000000946-9643.333ENSSLDG00000000464-5843.333Seriola_lalandi_dorsalis
ENSSDUG00000000946-9849.123ENSSPAG00000009405-7436.879Stegastes_partitus
ENSSDUG00000000946-9430.945ENSTRUG00000019941-5530.216Takifugu_rubripes
ENSSDUG00000000946-9837.104ENSTNIG00000008154-9948.507Tetraodon_nigroviridis
ENSSDUG00000000946-9550.000ENSXCOG00000005697-9950.000Xiphophorus_couchianus
ENSSDUG00000000946-9549.383ENSXMAG00000022242-8942.975Xiphophorus_maculatus

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