EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000972 (Gene tree)
Gene ID: 111221800
Gene Symbol: gnl3
Alias: id:ibd2914|nstm|nucleostemin|wu:fb38a04|wu:fc55d07|zgc:123093
Full Name: G protein nucleolar 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7146 bases
Position: chrBDQW01000088.1:12577831-12584976
Accession: 111221800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001207	GN3L_Grn1	PF08701.11	1.8e-22	1	1
ENSSDUP00000001207	MMR_HSR1	PF01926.23	5.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001255	-	4046	XM_022745368	ENSSDUP00000001207	553 (aa)	XP_022601089	UPI000BBE2ED9

Gene Model

Click here to download ENSSDUG00000000972's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000972's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000972	gnl3	74	41.363	ENSSDUG00000013117	gnl3l	62	44.350

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000972	gnl3	99	44.902	ENSG00000163938	GNL3	100	50.725	Homo_sapiens
ENSSDUG00000000972	gnl3	100	80.610	ENSAPOG00000004048	gnl3	100	80.610	Acanthochromis_polyacanthus
ENSSDUG00000000972	gnl3	99	43.617	ENSAMEG00000008456	GNL3	99	42.908	Ailuropoda_melanoleuca
ENSSDUG00000000972	gnl3	100	72.875	ENSACIG00000000545	gnl3	100	72.333	Amphilophus_citrinellus
ENSSDUG00000000972	gnl3	100	80.969	ENSAOCG00000012879	gnl3	100	80.969	Amphiprion_ocellaris
ENSSDUG00000000972	gnl3	100	80.431	ENSAPEG00000006146	gnl3	100	80.431	Amphiprion_percula
ENSSDUG00000000972	gnl3	100	82.406	ENSATEG00000024242	gnl3	100	82.944	Anabas_testudineus
ENSSDUG00000000972	gnl3	96	44.526	ENSAPLG00000005171	GNL3	99	44.954	Anas_platyrhynchos
ENSSDUG00000000972	gnl3	99	47.687	ENSACAG00000007357	GNL3	99	47.902	Anolis_carolinensis
ENSSDUG00000000972	gnl3	99	44.424	ENSANAG00000033209	GNL3	99	44.424	Aotus_nancymaae
ENSSDUG00000000972	gnl3	100	74.503	ENSACLG00000007381	gnl3	100	74.503	Astatotilapia_calliptera
ENSSDUG00000000972	gnl3	99	52.373	ENSAMXG00000020880	gnl3	99	54.145	Astyanax_mexicanus
ENSSDUG00000000972	gnl3	99	44.484	ENSBTAG00000014549	GNL3	99	45.745	Bos_taurus
ENSSDUG00000000972	gnl3	99	45.126	ENSCJAG00000044256	-	99	45.126	Callithrix_jacchus
ENSSDUG00000000972	gnl3	99	45.126	ENSCJAG00000006864	-	99	45.126	Callithrix_jacchus
ENSSDUG00000000972	gnl3	87	47.228	ENSCAFG00000009004	GNL3	99	44.681	Canis_familiaris
ENSSDUG00000000972	gnl3	87	47.433	ENSCAFG00020002613	GNL3	90	47.433	Canis_lupus_dingo
ENSSDUG00000000972	gnl3	99	46.277	ENSCHIG00000022181	GNL3	99	46.454	Capra_hircus
ENSSDUG00000000972	gnl3	99	44.902	ENSTSYG00000006851	GNL3	99	44.821	Carlito_syrichta
ENSSDUG00000000972	gnl3	87	46.570	ENSCPOG00000000282	GNL3	88	46.570	Cavia_porcellus
ENSSDUG00000000972	gnl3	99	44.324	ENSCCAG00000033281	GNL3	99	44.324	Cebus_capucinus
ENSSDUG00000000972	gnl3	99	45.098	ENSCATG00000040886	GNL3	99	45.098	Cercocebus_atys
ENSSDUG00000000972	gnl3	99	42.986	ENSCLAG00000010109	-	99	43.705	Chinchilla_lanigera
ENSSDUG00000000972	gnl3	99	44.956	ENSCSAG00000013315	GNL3	99	44.248	Chlorocebus_sabaeus
ENSSDUG00000000972	gnl3	99	42.077	ENSCHOG00000002726	GNL3	99	42.308	Choloepus_hoffmanni
ENSSDUG00000000972	gnl3	76	47.140	ENSCPBG00000018330	-	96	47.368	Chrysemys_picta_bellii
ENSSDUG00000000972	gnl3	98	44.080	ENSCANG00000039969	GNL3	99	43.352	Colobus_angolensis_palliatus
ENSSDUG00000000972	gnl3	99	43.286	ENSCGRG00001020950	Gnl3	99	43.684	Cricetulus_griseus_chok1gshd
ENSSDUG00000000972	gnl3	99	43.286	ENSCGRG00000015225	Gnl3	99	43.684	Cricetulus_griseus_crigri
ENSSDUG00000000972	gnl3	99	70.471	ENSCSEG00000005009	gnl3	100	70.471	Cynoglossus_semilaevis
ENSSDUG00000000972	gnl3	100	73.779	ENSCVAG00000010679	gnl3	100	73.960	Cyprinodon_variegatus
ENSSDUG00000000972	gnl3	99	56.684	ENSDARG00000006219	gnl3	99	56.684	Danio_rerio
ENSSDUG00000000972	gnl3	99	43.761	ENSDNOG00000001037	GNL3	99	44.308	Dasypus_novemcinctus
ENSSDUG00000000972	gnl3	99	43.423	ENSDORG00000000674	Gnl3	99	43.604	Dipodomys_ordii
ENSSDUG00000000972	gnl3	87	78.261	ENSETEG00000016534	-	87	78.261	Echinops_telfairi
ENSSDUG00000000972	gnl3	99	45.423	ENSEASG00005014636	GNL3	99	44.718	Equus_asinus_asinus
ENSSDUG00000000972	gnl3	99	44.894	ENSECAG00000014850	GNL3	99	44.190	Equus_caballus
ENSSDUG00000000972	gnl3	99	42.652	ENSEEUG00000004427	GNL3	99	42.832	Erinaceus_europaeus
ENSSDUG00000000972	gnl3	100	67.794	ENSELUG00000008767	gnl3	100	67.794	Esox_lucius
ENSSDUG00000000972	gnl3	99	44.149	ENSFCAG00000015719	GNL3	99	44.149	Felis_catus
ENSSDUG00000000972	gnl3	99	48.201	ENSFALG00000008957	GNL3	99	47.406	Ficedula_albicollis
ENSSDUG00000000972	gnl3	99	44.485	ENSFDAG00000020679	GNL3	99	44.485	Fukomys_damarensis
ENSSDUG00000000972	gnl3	100	71.841	ENSFHEG00000020897	gnl3	100	72.022	Fundulus_heteroclitus
ENSSDUG00000000972	gnl3	99	61.456	ENSGMOG00000001745	gnl3	100	60.387	Gadus_morhua
ENSSDUG00000000972	gnl3	99	43.986	ENSGALG00000001613	GNL3	99	43.890	Gallus_gallus
ENSSDUG00000000972	gnl3	99	60.036	ENSGAFG00000007184	gnl3	99	60.401	Gambusia_affinis
ENSSDUG00000000972	gnl3	99	71.936	ENSGACG00000000309	gnl3	99	73.274	Gasterosteus_aculeatus
ENSSDUG00000000972	gnl3	79	46.813	ENSGAGG00000021579	-	98	47.875	Gopherus_agassizii
ENSSDUG00000000972	gnl3	99	44.902	ENSGGOG00000011444	GNL3	99	44.902	Gorilla_gorilla
ENSSDUG00000000972	gnl3	100	78.018	ENSHBUG00000001340	gnl3	100	79.099	Haplochromis_burtoni
ENSSDUG00000000972	gnl3	99	42.171	ENSHGLG00000018299	GNL3	99	42.199	Heterocephalus_glaber_female
ENSSDUG00000000972	gnl3	99	64.738	ENSHCOG00000009446	gnl3	99	65.461	Hippocampus_comes
ENSSDUG00000000972	gnl3	99	50.820	ENSIPUG00000023677	gnl3	95	55.081	Ictalurus_punctatus
ENSSDUG00000000972	gnl3	99	43.234	ENSSTOG00000000356	GNL3	99	42.783	Ictidomys_tridecemlineatus
ENSSDUG00000000972	gnl3	99	44.485	ENSJJAG00000021993	Gnl3	100	45.422	Jaculus_jaculus
ENSSDUG00000000972	gnl3	100	73.514	ENSKMAG00000005965	gnl3	100	73.514	Kryptolebias_marmoratus
ENSSDUG00000000972	gnl3	100	77.798	ENSLBEG00000011394	gnl3	100	77.798	Labrus_bergylta
ENSSDUG00000000972	gnl3	86	54.641	ENSLACG00000001259	GNL3	99	49.913	Latimeria_chalumnae
ENSSDUG00000000972	gnl3	99	54.497	ENSLOCG00000010542	gnl3	99	55.556	Lepisosteus_oculatus
ENSSDUG00000000972	gnl3	99	41.844	ENSLAFG00000016056	GNL3	99	41.667	Loxodonta_africana
ENSSDUG00000000972	gnl3	87	48.460	ENSMFAG00000000613	GNL3	99	45.276	Macaca_fascicularis
ENSSDUG00000000972	gnl3	85	46.947	ENSMMUG00000012511	GNL3	99	43.898	Macaca_mulatta
ENSSDUG00000000972	gnl3	85	47.158	ENSMNEG00000041979	GNL3	99	44.080	Macaca_nemestrina
ENSSDUG00000000972	gnl3	99	45.455	ENSMLEG00000027696	GNL3	99	45.455	Mandrillus_leucophaeus
ENSSDUG00000000972	gnl3	100	80.576	ENSMAMG00000008904	gnl3	100	80.755	Mastacembelus_armatus
ENSSDUG00000000972	gnl3	87	71.429	ENSMZEG00005014957	-	97	71.657	Maylandia_zebra
ENSSDUG00000000972	gnl3	100	77.838	ENSMZEG00005014857	gnl3	100	78.919	Maylandia_zebra
ENSSDUG00000000972	gnl3	99	36.013	ENSMGAG00000000848	GNL3	99	36.577	Meleagris_gallopavo
ENSSDUG00000000972	gnl3	99	43.915	ENSMAUG00000020178	Gnl3	99	43.750	Mesocricetus_auratus
ENSSDUG00000000972	gnl3	99	42.408	ENSMICG00000016373	GNL3	99	42.583	Microcebus_murinus
ENSSDUG00000000972	gnl3	99	42.274	ENSMOCG00000018437	Gnl3	99	42.274	Microtus_ochrogaster
ENSSDUG00000000972	gnl3	99	72.232	ENSMMOG00000002815	gnl3	93	78.870	Mola_mola
ENSSDUG00000000972	gnl3	88	50.000	ENSMODG00000011257	GNL3	99	45.760	Monodelphis_domestica
ENSSDUG00000000972	gnl3	96	77.547	ENSMALG00000021043	gnl3	96	84.134	Monopterus_albus
ENSSDUG00000000972	gnl3	99	43.571	MGP_CAROLIEiJ_G0019063	Gnl3	99	43.617	Mus_caroli
ENSSDUG00000000972	gnl3	99	43.393	ENSMUSG00000042354	Gnl3	100	53.333	Mus_musculus
ENSSDUG00000000972	gnl3	99	43.894	MGP_PahariEiJ_G0030080	Gnl3	99	43.894	Mus_pahari
ENSSDUG00000000972	gnl3	99	44.029	MGP_SPRETEiJ_G0019948	Gnl3	99	42.959	Mus_spretus
ENSSDUG00000000972	gnl3	99	42.755	ENSMPUG00000016777	GNL3	99	42.806	Mustela_putorius_furo
ENSSDUG00000000972	gnl3	99	44.624	ENSMLUG00000000728	GNL3	99	44.624	Myotis_lucifugus
ENSSDUG00000000972	gnl3	99	42.984	ENSNGAG00000017202	Gnl3	99	42.984	Nannospalax_galili
ENSSDUG00000000972	gnl3	87	73.597	ENSNBRG00000013161	gnl3	99	73.279	Neolamprologus_brichardi
ENSSDUG00000000972	gnl3	99	45.276	ENSNLEG00000007173	GNL3	99	45.276	Nomascus_leucogenys
ENSSDUG00000000972	gnl3	81	39.509	ENSMEUG00000011502	-	93	40.625	Notamacropus_eugenii
ENSSDUG00000000972	gnl3	77	40.092	ENSOPRG00000009356	GNL3	96	40.092	Ochotona_princeps
ENSSDUG00000000972	gnl3	99	43.137	ENSODEG00000009492	GNL3	99	43.137	Octodon_degus
ENSSDUG00000000972	gnl3	100	79.137	ENSONIG00000019335	gnl3	100	79.137	Oreochromis_niloticus
ENSSDUG00000000972	gnl3	99	46.140	ENSOANG00000013437	GNL3	99	45.699	Ornithorhynchus_anatinus
ENSSDUG00000000972	gnl3	99	42.908	ENSOCUG00000009841	GNL3	99	42.254	Oryctolagus_cuniculus
ENSSDUG00000000972	gnl3	100	72.875	ENSORLG00000016030	gnl3	100	73.056	Oryzias_latipes
ENSSDUG00000000972	gnl3	100	73.418	ENSORLG00020014358	gnl3	100	73.599	Oryzias_latipes_hni
ENSSDUG00000000972	gnl3	100	73.056	ENSORLG00015009489	gnl3	100	73.237	Oryzias_latipes_hsok
ENSSDUG00000000972	gnl3	100	71.790	ENSOMEG00000005462	gnl3	100	72.875	Oryzias_melastigma
ENSSDUG00000000972	gnl3	99	43.761	ENSOGAG00000004101	GNL3	99	44.035	Otolemur_garnettii
ENSSDUG00000000972	gnl3	99	45.922	ENSOARG00000002470	GNL3	99	45.664	Ovis_aries
ENSSDUG00000000972	gnl3	99	45.259	ENSPPAG00000019253	GNL3	99	45.259	Pan_paniscus
ENSSDUG00000000972	gnl3	99	44.306	ENSPPRG00000009550	GNL3	99	44.306	Panthera_pardus
ENSSDUG00000000972	gnl3	99	44.128	ENSPTIG00000009356	GNL3	99	44.128	Panthera_tigris_altaica
ENSSDUG00000000972	gnl3	99	45.259	ENSPTRG00000015009	GNL3	99	45.259	Pan_troglodytes
ENSSDUG00000000972	gnl3	87	47.433	ENSPANG00000016579	GNL3	99	44.385	Papio_anubis
ENSSDUG00000000972	gnl3	100	60.465	ENSPKIG00000024295	gnl3	100	61.634	Paramormyrops_kingsleyae
ENSSDUG00000000972	gnl3	98	48.932	ENSPSIG00000011486	GNL3	99	47.865	Pelodiscus_sinensis
ENSSDUG00000000972	gnl3	99	63.636	ENSPMGG00000008210	gnl3	99	64.791	Periophthalmus_magnuspinnatus
ENSSDUG00000000972	gnl3	99	43.717	ENSPEMG00000017577	Gnl3	99	43.915	Peromyscus_maniculatus_bairdii
ENSSDUG00000000972	gnl3	87	48.963	ENSPCIG00000018642	GNL3	98	44.385	Phascolarctos_cinereus
ENSSDUG00000000972	gnl3	100	68.885	ENSPFOG00000017601	gnl3	100	68.885	Poecilia_formosa
ENSSDUG00000000972	gnl3	100	73.105	ENSPLAG00000016968	gnl3	100	73.105	Poecilia_latipinna
ENSSDUG00000000972	gnl3	99	68.248	ENSPMEG00000018775	gnl3	99	67.701	Poecilia_mexicana
ENSSDUG00000000972	gnl3	99	67.336	ENSPREG00000002909	gnl3	99	66.788	Poecilia_reticulata
ENSSDUG00000000972	gnl3	99	44.077	ENSPPYG00000013800	GNL3	99	44.077	Pongo_abelii
ENSSDUG00000000972	gnl3	81	46.341	ENSPCAG00000002006	GNL3	81	46.341	Procavia_capensis
ENSSDUG00000000972	gnl3	99	44.742	ENSPCOG00000026637	GNL3	99	44.912	Propithecus_coquereli
ENSSDUG00000000972	gnl3	99	45.826	ENSPVAG00000012586	GNL3	99	46.004	Pteropus_vampyrus
ENSSDUG00000000972	gnl3	91	67.829	ENSPNYG00000005130	gnl3	98	67.315	Pundamilia_nyererei
ENSSDUG00000000972	gnl3	99	53.616	ENSPNAG00000013096	gnl3	99	53.873	Pygocentrus_nattereri
ENSSDUG00000000972	gnl3	99	43.440	ENSRNOG00000028461	Gnl3	99	44.170	Rattus_norvegicus
ENSSDUG00000000972	gnl3	87	48.460	ENSRBIG00000031778	GNL3	99	45.276	Rhinopithecus_bieti
ENSSDUG00000000972	gnl3	87	48.460	ENSRROG00000030086	GNL3	99	45.276	Rhinopithecus_roxellana
ENSSDUG00000000972	gnl3	99	44.248	ENSSBOG00000019990	GNL3	99	44.365	Saimiri_boliviensis_boliviensis
ENSSDUG00000000972	gnl3	86	48.218	ENSSHAG00000006141	GNL3	99	45.144	Sarcophilus_harrisii
ENSSDUG00000000972	gnl3	100	59.213	ENSSFOG00015021228	gnl3	100	59.292	Scleropages_formosus
ENSSDUG00000000972	gnl3	100	81.013	ENSSMAG00000006662	gnl3	100	81.013	Scophthalmus_maximus
ENSSDUG00000000972	gnl3	100	98.553	ENSSLDG00000008692	gnl3	92	98.553	Seriola_lalandi_dorsalis
ENSSDUG00000000972	gnl3	86	44.191	ENSSARG00000002226	GNL3	87	44.008	Sorex_araneus
ENSSDUG00000000972	gnl3	99	47.552	ENSSPUG00000003582	GNL3	99	47.140	Sphenodon_punctatus
ENSSDUG00000000972	gnl3	100	80.216	ENSSPAG00000020180	gnl3	100	80.216	Stegastes_partitus
ENSSDUG00000000972	gnl3	99	43.617	ENSSSCG00000011449	GNL3	99	43.794	Sus_scrofa
ENSSDUG00000000972	gnl3	99	46.372	ENSTGUG00000005774	GNL3	99	48.036	Taeniopygia_guttata
ENSSDUG00000000972	gnl3	100	66.906	ENSTRUG00000005552	gnl3	100	66.906	Takifugu_rubripes
ENSSDUG00000000972	gnl3	100	65.766	ENSTNIG00000007263	gnl3	100	66.126	Tetraodon_nigroviridis
ENSSDUG00000000972	gnl3	97	41.924	ENSTBEG00000017518	GNL3	99	42.230	Tupaia_belangeri
ENSSDUG00000000972	gnl3	99	43.794	ENSUAMG00000012347	GNL3	99	43.085	Ursus_americanus
ENSSDUG00000000972	gnl3	99	43.972	ENSUMAG00000021001	GNL3	99	43.262	Ursus_maritimus
ENSSDUG00000000972	gnl3	99	43.038	ENSVVUG00000024536	-	99	43.219	Vulpes_vulpes
ENSSDUG00000000972	gnl3	99	55.738	ENSXCOG00000018425	gnl3	99	70.323	Xiphophorus_couchianus
ENSSDUG00000000972	gnl3	100	71.119	ENSXMAG00000022565	gnl3	100	71.300	Xiphophorus_maculatus