EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000000996 (Gene tree)
Gene ID: 111233192
Gene Symbol: KHDRBS3
Alias: -
Full Name: KH RNA binding domain containing%2C signal transduction associated 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 101704 bases
Position: chrBDQW01000378.1:22867-124570
Accession: 111233192
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001253	KH_1	PF00013.29	1.1e-06	1	1
ENSSDUP00000001278	KH_1	PF00013.29	1.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001305	KHDRBS3-201	2562	XM_022760950	ENSSDUP00000001253	340 (aa)	XP_022616671	UPI000BBF0265
ENSSDUT00000001330	KHDRBS3-202	1113	-	ENSSDUP00000001278	370 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000000996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000000996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000000996	KHDRBS3	99	48.925	ENSSDUG00000001503	khdrbs1b	99	51.639
ENSSDUG00000000996	KHDRBS3	100	58.523	ENSSDUG00000023520	khdrbs2	100	58.523
ENSSDUG00000000996	KHDRBS3	54	38.308	ENSSDUG00000016260	qkia	84	31.642
ENSSDUG00000000996	KHDRBS3	77	35.540	ENSSDUG00000013691	qki2	86	35.889
ENSSDUG00000000996	KHDRBS3	100	45.526	ENSSDUG00000010794	khdrbs1a	94	46.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSG00000131773	KHDRBS3	99	91.824	Homo_sapiens
ENSSDUG00000000996	KHDRBS3	91	75.394	ENSAMEG00000016744	KHDRBS3	100	74.540	Ailuropoda_melanoleuca
ENSSDUG00000000996	KHDRBS3	99	82.899	ENSACIG00000002529	KHDRBS3	100	95.926	Amphilophus_citrinellus
ENSSDUG00000000996	KHDRBS3	100	98.529	ENSAOCG00000006836	KHDRBS3	100	98.529	Amphiprion_ocellaris
ENSSDUG00000000996	KHDRBS3	100	98.529	ENSAPEG00000005415	KHDRBS3	100	98.529	Amphiprion_percula
ENSSDUG00000000996	KHDRBS3	100	97.059	ENSATEG00000010658	KHDRBS3	100	97.059	Anabas_testudineus
ENSSDUG00000000996	KHDRBS3	91	81.013	ENSAPLG00000014746	KHDRBS3	99	81.013	Anas_platyrhynchos
ENSSDUG00000000996	KHDRBS3	84	77.397	ENSACAG00000012042	KHDRBS3	100	77.397	Anolis_carolinensis
ENSSDUG00000000996	KHDRBS3	99	71.965	ENSANAG00000019406	KHDRBS3	99	72.622	Aotus_nancymaae
ENSSDUG00000000996	KHDRBS3	100	96.471	ENSACLG00000010826	KHDRBS3	100	96.471	Astatotilapia_calliptera
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSBTAG00000002181	KHDRBS3	99	77.101	Bos_taurus
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSCJAG00000004331	KHDRBS3	99	77.101	Callithrix_jacchus
ENSSDUG00000000996	KHDRBS3	99	76.163	ENSCAFG00000001166	KHDRBS3	99	76.812	Canis_familiaris
ENSSDUG00000000996	KHDRBS3	91	76.025	ENSCAFG00020013570	KHDRBS3	99	76.730	Canis_lupus_dingo
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSCHIG00000016533	KHDRBS3	99	77.101	Capra_hircus
ENSSDUG00000000996	KHDRBS3	91	75.949	ENSTSYG00000004106	KHDRBS3	100	76.656	Carlito_syrichta
ENSSDUG00000000996	KHDRBS3	99	73.563	ENSCPOG00000000342	KHDRBS3	99	74.212	Cavia_porcellus
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSCCAG00000031191	KHDRBS3	99	77.391	Cebus_capucinus
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSCATG00000034823	KHDRBS3	99	77.391	Cercocebus_atys
ENSSDUG00000000996	KHDRBS3	99	75.731	ENSCLAG00000002164	KHDRBS3	100	76.385	Chinchilla_lanigera
ENSSDUG00000000996	KHDRBS3	94	74.769	ENSCSAG00000009815	KHDRBS3	100	75.460	Chlorocebus_sabaeus
ENSSDUG00000000996	KHDRBS3	99	80.758	ENSCPBG00000019654	KHDRBS3	99	80.758	Chrysemys_picta_bellii
ENSSDUG00000000996	KHDRBS3	99	75.872	ENSCANG00000031881	KHDRBS3	100	77.419	Colobus_angolensis_palliatus
ENSSDUG00000000996	KHDRBS3	91	76.266	ENSCGRG00001000113	Khdrbs3	100	76.972	Cricetulus_griseus_chok1gshd
ENSSDUG00000000996	KHDRBS3	100	92.353	ENSCSEG00000013385	KHDRBS3	100	92.353	Cynoglossus_semilaevis
ENSSDUG00000000996	KHDRBS3	100	95.294	ENSCVAG00000007211	KHDRBS3	100	95.294	Cyprinodon_variegatus
ENSSDUG00000000996	KHDRBS3	87	80.135	ENSDARG00000101020	KHDRBS3	97	80.135	Danio_rerio
ENSSDUG00000000996	KHDRBS3	84	75.170	ENSDNOG00000010878	KHDRBS3	100	75.170	Dasypus_novemcinctus
ENSSDUG00000000996	KHDRBS3	94	74.769	ENSDORG00000014595	-	94	74.769	Dipodomys_ordii
ENSSDUG00000000996	KHDRBS3	91	64.038	ENSETEG00000004701	KHDRBS3	100	64.780	Echinops_telfairi
ENSSDUG00000000996	KHDRBS3	92	75.549	ENSEASG00005022023	KHDRBS3	99	76.489	Equus_asinus_asinus
ENSSDUG00000000996	KHDRBS3	99	76.163	ENSECAG00000010194	KHDRBS3	99	76.812	Equus_caballus
ENSSDUG00000000996	KHDRBS3	91	59.810	ENSEEUG00000007062	KHDRBS3	100	59.810	Erinaceus_europaeus
ENSSDUG00000000996	KHDRBS3	100	87.393	ENSELUG00000011955	KHDRBS3	100	87.393	Esox_lucius
ENSSDUG00000000996	KHDRBS3	99	76.163	ENSFCAG00000000229	KHDRBS3	99	76.812	Felis_catus
ENSSDUG00000000996	KHDRBS3	99	80.175	ENSFALG00000002752	KHDRBS3	99	80.175	Ficedula_albicollis
ENSSDUG00000000996	KHDRBS3	91	75.710	ENSFDAG00000020910	KHDRBS3	93	76.415	Fukomys_damarensis
ENSSDUG00000000996	KHDRBS3	100	93.235	ENSFHEG00000017679	KHDRBS3	100	93.235	Fundulus_heteroclitus
ENSSDUG00000000996	KHDRBS3	91	84.444	ENSGMOG00000009156	KHDRBS3	100	85.397	Gadus_morhua
ENSSDUG00000000996	KHDRBS3	99	80.466	ENSGALG00000031519	KHDRBS3	99	80.466	Gallus_gallus
ENSSDUG00000000996	KHDRBS3	100	94.412	ENSGAFG00000018918	KHDRBS3	100	94.412	Gambusia_affinis
ENSSDUG00000000996	KHDRBS3	87	85.382	ENSGACG00000008847	KHDRBS3	100	86.624	Gasterosteus_aculeatus
ENSSDUG00000000996	KHDRBS3	99	80.175	ENSGAGG00000022819	KHDRBS3	99	80.175	Gopherus_agassizii
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSGGOG00000000940	KHDRBS3	99	77.391	Gorilla_gorilla
ENSSDUG00000000996	KHDRBS3	100	96.765	ENSHBUG00000009781	KHDRBS3	100	96.765	Haplochromis_burtoni
ENSSDUG00000000996	KHDRBS3	99	75.581	ENSHGLG00000006718	KHDRBS3	99	76.232	Heterocephalus_glaber_female
ENSSDUG00000000996	KHDRBS3	99	65.882	ENSHGLG00000008364	-	99	66.569	Heterocephalus_glaber_female
ENSSDUG00000000996	KHDRBS3	91	75.633	ENSHGLG00100004576	-	100	76.341	Heterocephalus_glaber_male
ENSSDUG00000000996	KHDRBS3	96	66.970	ENSHGLG00100010562	-	95	67.674	Heterocephalus_glaber_male
ENSSDUG00000000996	KHDRBS3	95	91.667	ENSHCOG00000009110	KHDRBS3	99	91.667	Hippocampus_comes
ENSSDUG00000000996	KHDRBS3	100	86.842	ENSIPUG00000004984	khdrbs3	100	86.842	Ictalurus_punctatus
ENSSDUG00000000996	KHDRBS3	99	75.872	ENSSTOG00000008710	KHDRBS3	99	76.522	Ictidomys_tridecemlineatus
ENSSDUG00000000996	KHDRBS3	99	75.291	ENSJJAG00000011049	Khdrbs3	99	75.942	Jaculus_jaculus
ENSSDUG00000000996	KHDRBS3	78	95.094	ENSKMAG00000000152	-	81	95.094	Kryptolebias_marmoratus
ENSSDUG00000000996	KHDRBS3	100	94.477	ENSLBEG00000003951	KHDRBS3	87	94.767	Labrus_bergylta
ENSSDUG00000000996	KHDRBS3	86	86.780	ENSLOCG00000003734	KHDRBS3	100	89.189	Lepisosteus_oculatus
ENSSDUG00000000996	KHDRBS3	94	74.462	ENSLAFG00000004849	KHDRBS3	98	75.153	Loxodonta_africana
ENSSDUG00000000996	KHDRBS3	97	72.700	ENSMFAG00000041845	KHDRBS3	100	76.871	Macaca_fascicularis
ENSSDUG00000000996	KHDRBS3	99	74.709	ENSMMUG00000022248	KHDRBS3	99	77.116	Macaca_mulatta
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSMNEG00000038285	KHDRBS3	99	77.391	Macaca_nemestrina
ENSSDUG00000000996	KHDRBS3	91	76.582	ENSMLEG00000032520	KHDRBS3	100	77.287	Mandrillus_leucophaeus
ENSSDUG00000000996	KHDRBS3	100	97.059	ENSMAMG00000003695	KHDRBS3	100	97.059	Mastacembelus_armatus
ENSSDUG00000000996	KHDRBS3	100	96.765	ENSMZEG00005001896	KHDRBS3	100	96.765	Maylandia_zebra
ENSSDUG00000000996	KHDRBS3	97	74.855	ENSMGAG00000012888	KHDRBS3	100	78.947	Meleagris_gallopavo
ENSSDUG00000000996	KHDRBS3	99	69.118	ENSMAUG00000008539	Khdrbs3	99	69.118	Mesocricetus_auratus
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSMICG00000027467	KHDRBS3	99	77.101	Microcebus_murinus
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSMOCG00000020954	Khdrbs3	99	77.101	Microtus_ochrogaster
ENSSDUG00000000996	KHDRBS3	78	96.604	ENSMMOG00000021238	KHDRBS3	70	96.604	Mola_mola
ENSSDUG00000000996	KHDRBS3	99	78.070	ENSMODG00000000975	KHDRBS3	99	78.717	Monodelphis_domestica
ENSSDUG00000000996	KHDRBS3	100	96.471	ENSMALG00000016210	KHDRBS3	100	96.471	Monopterus_albus
ENSSDUG00000000996	KHDRBS3	99	76.744	MGP_CAROLIEiJ_G0019855	Khdrbs3	99	77.391	Mus_caroli
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSMUSG00000022332	Khdrbs3	100	96.032	Mus_musculus
ENSSDUG00000000996	KHDRBS3	99	76.744	MGP_PahariEiJ_G0019860	Khdrbs3	99	77.391	Mus_pahari
ENSSDUG00000000996	KHDRBS3	99	76.453	MGP_SPRETEiJ_G0020753	Khdrbs3	99	77.101	Mus_spretus
ENSSDUG00000000996	KHDRBS3	94	73.846	ENSMPUG00000001869	KHDRBS3	100	74.540	Mustela_putorius_furo
ENSSDUG00000000996	KHDRBS3	94	69.939	ENSMLUG00000004054	KHDRBS3	98	70.642	Myotis_lucifugus
ENSSDUG00000000996	KHDRBS3	99	95.846	ENSNBRG00000000697	KHDRBS3	99	95.846	Neolamprologus_brichardi
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSNLEG00000010766	KHDRBS3	99	77.391	Nomascus_leucogenys
ENSSDUG00000000996	KHDRBS3	90	76.115	ENSOPRG00000000404	KHDRBS3	99	76.825	Ochotona_princeps
ENSSDUG00000000996	KHDRBS3	99	75.291	ENSODEG00000000682	KHDRBS3	99	75.942	Octodon_degus
ENSSDUG00000000996	KHDRBS3	91	97.097	ENSONIG00000007652	KHDRBS3	100	97.097	Oreochromis_niloticus
ENSSDUG00000000996	KHDRBS3	96	75.150	ENSOANG00000014074	KHDRBS3	100	75.449	Ornithorhynchus_anatinus
ENSSDUG00000000996	KHDRBS3	94	74.390	ENSOCUG00000000743	KHDRBS3	100	75.076	Oryctolagus_cuniculus
ENSSDUG00000000996	KHDRBS3	100	90.882	ENSORLG00000013441	KHDRBS3	100	90.882	Oryzias_latipes
ENSSDUG00000000996	KHDRBS3	100	90.882	ENSORLG00020021838	KHDRBS3	100	90.882	Oryzias_latipes_hni
ENSSDUG00000000996	KHDRBS3	100	87.647	ENSORLG00015010093	KHDRBS3	100	87.647	Oryzias_latipes_hsok
ENSSDUG00000000996	KHDRBS3	99	77.035	ENSOGAG00000005150	KHDRBS3	99	77.681	Otolemur_garnettii
ENSSDUG00000000996	KHDRBS3	99	72.093	ENSOARG00000005036	KHDRBS3	100	72.754	Ovis_aries
ENSSDUG00000000996	KHDRBS3	99	76.453	ENSPPAG00000043998	KHDRBS3	99	77.101	Pan_paniscus
ENSSDUG00000000996	KHDRBS3	99	76.163	ENSPPRG00000001453	KHDRBS3	99	76.812	Panthera_pardus
ENSSDUG00000000996	KHDRBS3	91	75.949	ENSPTIG00000005373	KHDRBS3	91	76.656	Panthera_tigris_altaica
ENSSDUG00000000996	KHDRBS3	99	70.349	ENSPTRG00000020608	KHDRBS3	99	71.014	Pan_troglodytes
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSPANG00000006134	KHDRBS3	99	77.391	Papio_anubis
ENSSDUG00000000996	KHDRBS3	100	86.628	ENSPKIG00000002433	KHDRBS3	100	86.628	Paramormyrops_kingsleyae
ENSSDUG00000000996	KHDRBS3	99	79.070	ENSPSIG00000004366	KHDRBS3	99	79.070	Pelodiscus_sinensis
ENSSDUG00000000996	KHDRBS3	100	91.545	ENSPMGG00000018866	KHDRBS3	100	91.837	Periophthalmus_magnuspinnatus
ENSSDUG00000000996	KHDRBS3	100	95.294	ENSPREG00000015667	KHDRBS3	100	95.294	Poecilia_reticulata
ENSSDUG00000000996	KHDRBS3	97	75.074	ENSPPYG00000018899	KHDRBS3	100	75.740	Pongo_abelii
ENSSDUG00000000996	KHDRBS3	91	75.000	ENSPVAG00000017021	KHDRBS3	100	75.710	Pteropus_vampyrus
ENSSDUG00000000996	KHDRBS3	100	84.751	ENSPNYG00000007200	KHDRBS3	100	84.751	Pundamilia_nyererei
ENSSDUG00000000996	KHDRBS3	100	87.500	ENSPNAG00000013500	KHDRBS3	100	87.500	Pygocentrus_nattereri
ENSSDUG00000000996	KHDRBS3	99	75.652	ENSRNOG00000009539	Khdrbs3	99	76.301	Rattus_norvegicus
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSRBIG00000036854	KHDRBS3	99	77.391	Rhinopithecus_bieti
ENSSDUG00000000996	KHDRBS3	99	76.744	ENSRROG00000044792	KHDRBS3	99	77.391	Rhinopithecus_roxellana
ENSSDUG00000000996	KHDRBS3	99	75.942	ENSSBOG00000020642	KHDRBS3	100	77.219	Saimiri_boliviensis_boliviensis
ENSSDUG00000000996	KHDRBS3	100	88.372	ENSSFOG00015013177	khdrbs3	100	88.372	Scleropages_formosus
ENSSDUG00000000996	KHDRBS3	100	95.588	ENSSMAG00000020535	KHDRBS3	100	95.588	Scophthalmus_maximus
ENSSDUG00000000996	KHDRBS3	86	86.735	ENSSLDG00000006072	KHDRBS3	87	86.735	Seriola_lalandi_dorsalis
ENSSDUG00000000996	KHDRBS3	71	59.514	ENSSARG00000011751	KHDRBS3	100	60.484	Sorex_araneus
ENSSDUG00000000996	KHDRBS3	99	79.300	ENSSPUG00000005628	KHDRBS3	99	79.300	Sphenodon_punctatus
ENSSDUG00000000996	KHDRBS3	100	97.941	ENSSPAG00000018331	KHDRBS3	100	97.941	Stegastes_partitus
ENSSDUG00000000996	KHDRBS3	94	75.535	ENSSSCG00000005941	KHDRBS3	92	76.220	Sus_scrofa
ENSSDUG00000000996	KHDRBS3	99	79.883	ENSTGUG00000012611	KHDRBS3	99	79.883	Taeniopygia_guttata
ENSSDUG00000000996	KHDRBS3	100	83.235	ENSTRUG00000013451	KHDRBS3	100	83.235	Takifugu_rubripes
ENSSDUG00000000996	KHDRBS3	92	90.798	ENSTNIG00000014021	KHDRBS3	100	90.798	Tetraodon_nigroviridis
ENSSDUG00000000996	KHDRBS3	99	77.326	ENSTBEG00000004773	KHDRBS3	99	77.971	Tupaia_belangeri
ENSSDUG00000000996	KHDRBS3	99	75.872	ENSTTRG00000001270	KHDRBS3	99	76.522	Tursiops_truncatus
ENSSDUG00000000996	KHDRBS3	99	71.884	ENSUMAG00000002010	KHDRBS3	100	75.850	Ursus_maritimus
ENSSDUG00000000996	KHDRBS3	91	76.025	ENSVVUG00000019368	KHDRBS3	99	76.730	Vulpes_vulpes
ENSSDUG00000000996	KHDRBS3	92	76.250	ENSXETG00000009227	khdrbs3	100	77.188	Xenopus_tropicalis
ENSSDUG00000000996	KHDRBS3	69	96.581	ENSXCOG00000010479	KHDRBS3	79	96.581	Xiphophorus_couchianus
ENSSDUG00000000996	KHDRBS3	100	93.529	ENSXMAG00000005362	KHDRBS3	100	93.529	Xiphophorus_maculatus