EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001202 (Gene tree)
Gene ID: 111236592
Gene Symbol: kars
Alias: cb530|wu:fa16h02|zgc:92483
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8729 bases
Position: chrBDQW01000674.1:1426277-1435005
Accession: 111236592
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001560	tRNA_anti-codon	PF01336.25	5.5e-13	1	1
ENSSDUP00000001547	tRNA_anti-codon	PF01336.25	6.2e-13	1	1
ENSSDUP00000001560	tRNA-synt_2	PF00152.20	2.2e-79	1	1
ENSSDUP00000001547	tRNA-synt_2	PF00152.20	2.5e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001616	-	2771	XM_022765387	ENSSDUP00000001560	578 (aa)	XP_022621108	UPI000BBE478C
ENSSDUT00000001604	-	2939	XM_022765386	ENSSDUP00000001547	610 (aa)	XP_022621107	UPI000BBE7BB8

Gene Model

Click here to download ENSSDUG00000001202's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001202's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001202	kars	99	79.387	ENSG00000065427	KARS	100	88.235	Homo_sapiens
ENSSDUG00000001202	kars	100	91.003	ENSAPOG00000010997	kars	100	91.003	Acanthochromis_polyacanthus
ENSSDUG00000001202	kars	100	77.441	ENSAMEG00000005347	KARS	99	75.241	Ailuropoda_melanoleuca
ENSSDUG00000001202	kars	100	89.273	ENSACIG00000000304	kars	100	89.273	Amphilophus_citrinellus
ENSSDUG00000001202	kars	99	92.160	ENSAOCG00000012971	kars	98	92.203	Amphiprion_ocellaris
ENSSDUG00000001202	kars	100	93.080	ENSAPEG00000011144	kars	100	93.080	Amphiprion_percula
ENSSDUG00000001202	kars	100	91.869	ENSATEG00000004954	kars	100	91.869	Anabas_testudineus
ENSSDUG00000001202	kars	93	82.342	ENSAPLG00000012705	KARS	97	82.804	Anas_platyrhynchos
ENSSDUG00000001202	kars	99	77.990	ENSACAG00000007577	KARS	93	76.807	Anolis_carolinensis
ENSSDUG00000001202	kars	99	65.772	ENSANAG00000031739	-	99	62.742	Aotus_nancymaae
ENSSDUG00000001202	kars	99	80.243	ENSANAG00000030403	-	97	80.243	Aotus_nancymaae
ENSSDUG00000001202	kars	100	95.156	ENSACLG00000001613	kars	100	94.426	Astatotilapia_calliptera
ENSSDUG00000001202	kars	100	90.830	ENSAMXG00000030719	kars	100	90.830	Astyanax_mexicanus
ENSSDUG00000001202	kars	100	79.195	ENSBTAG00000015677	KARS	77	79.195	Bos_taurus
ENSSDUG00000001202	kars	96	59.220	WBGene00002238	kars-1	97	62.600	Caenorhabditis_elegans
ENSSDUG00000001202	kars	99	80.409	ENSCJAG00000014213	KARS	100	78.680	Callithrix_jacchus
ENSSDUG00000001202	kars	99	79.452	ENSCAFG00000020069	KARS	97	77.288	Canis_familiaris
ENSSDUG00000001202	kars	99	80.379	ENSCAFG00020001721	KARS	97	80.379	Canis_lupus_dingo
ENSSDUG00000001202	kars	99	79.897	ENSCHIG00000014108	-	98	79.897	Capra_hircus
ENSSDUG00000001202	kars	96	78.929	ENSCHIG00000016073	-	89	79.888	Capra_hircus
ENSSDUG00000001202	kars	99	80.479	ENSTSYG00000001643	KARS	99	80.628	Carlito_syrichta
ENSSDUG00000001202	kars	98	73.997	ENSCAPG00000016234	KARS	96	74.256	Cavia_aperea
ENSSDUG00000001202	kars	100	80.203	ENSCPOG00000012036	KARS	99	80.203	Cavia_porcellus
ENSSDUG00000001202	kars	99	80.589	ENSCCAG00000034307	-	97	80.589	Cebus_capucinus
ENSSDUG00000001202	kars	94	65.511	ENSCCAG00000030337	-	100	65.511	Cebus_capucinus
ENSSDUG00000001202	kars	99	78.705	ENSCATG00000038129	KARS	96	79.401	Cercocebus_atys
ENSSDUG00000001202	kars	99	80.034	ENSCLAG00000007905	KARS	98	80.034	Chinchilla_lanigera
ENSSDUG00000001202	kars	97	79.049	ENSCSAG00000003664	KARS	97	75.286	Chlorocebus_sabaeus
ENSSDUG00000001202	kars	79	85.558	ENSCHOG00000013447	KARS	73	85.558	Choloepus_hoffmanni
ENSSDUG00000001202	kars	98	81.850	ENSCPBG00000026969	KARS	97	81.850	Chrysemys_picta_bellii
ENSSDUG00000001202	kars	92	71.429	ENSCPBG00000002553	-	96	71.429	Chrysemys_picta_bellii
ENSSDUG00000001202	kars	98	66.961	ENSCING00000009513	-	98	66.025	Ciona_intestinalis
ENSSDUG00000001202	kars	55	72.100	ENSCSAVG00000001136	-	100	73.180	Ciona_savignyi
ENSSDUG00000001202	kars	99	68.229	ENSCSAVG00000007684	-	99	68.229	Ciona_savignyi
ENSSDUG00000001202	kars	99	74.957	ENSCANG00000032813	KARS	98	74.957	Colobus_angolensis_palliatus
ENSSDUG00000001202	kars	98	81.597	ENSCGRG00001004055	KARS	96	81.597	Cricetulus_griseus_chok1gshd
ENSSDUG00000001202	kars	98	81.597	ENSCGRG00000014242	KARS	96	81.597	Cricetulus_griseus_crigri
ENSSDUG00000001202	kars	99	93.403	ENSCSEG00000008324	kars	99	93.403	Cynoglossus_semilaevis
ENSSDUG00000001202	kars	99	93.333	ENSCVAG00000019686	kars	99	93.333	Cyprinodon_variegatus
ENSSDUG00000001202	kars	100	90.484	ENSDARG00000103799	kars	99	92.039	Danio_rerio
ENSSDUG00000001202	kars	97	80.458	ENSDNOG00000002241	KARS	97	76.797	Dasypus_novemcinctus
ENSSDUG00000001202	kars	99	78.983	ENSDORG00000004780	-	99	78.983	Dipodomys_ordii
ENSSDUG00000001202	kars	95	63.225	ENSDORG00000024214	-	95	62.118	Dipodomys_ordii
ENSSDUG00000001202	kars	99	70.191	FBgn0027084	LysRS	99	69.483	Drosophila_melanogaster
ENSSDUG00000001202	kars	97	80.952	ENSETEG00000008353	KARS	97	77.124	Echinops_telfairi
ENSSDUG00000001202	kars	97	71.658	ENSEBUG00000001284	-	96	71.658	Eptatretus_burgeri
ENSSDUG00000001202	kars	100	78.451	ENSEASG00005013497	KARS	99	79.357	Equus_asinus_asinus
ENSSDUG00000001202	kars	99	79.357	ENSECAG00000013424	KARS	99	79.357	Equus_caballus
ENSSDUG00000001202	kars	98	74.087	ENSEEUG00000007042	KARS	97	71.289	Erinaceus_europaeus
ENSSDUG00000001202	kars	98	84.043	ENSELUG00000014575	kars	97	84.043	Esox_lucius
ENSSDUG00000001202	kars	98	80.594	ENSFCAG00000008573	KARS	97	80.277	Felis_catus
ENSSDUG00000001202	kars	98	81.261	ENSFALG00000002543	KARS	97	81.261	Ficedula_albicollis
ENSSDUG00000001202	kars	99	80.208	ENSFDAG00000007155	KARS	97	80.208	Fukomys_damarensis
ENSSDUG00000001202	kars	100	90.311	ENSFHEG00000006172	kars	100	90.311	Fundulus_heteroclitus
ENSSDUG00000001202	kars	98	88.732	ENSGMOG00000002633	kars	99	86.297	Gadus_morhua
ENSSDUG00000001202	kars	99	81.379	ENSGALG00000000907	KARS	99	81.754	Gallus_gallus
ENSSDUG00000001202	kars	99	92.201	ENSGAFG00000017252	kars	99	92.201	Gambusia_affinis
ENSSDUG00000001202	kars	100	91.738	ENSGACG00000015749	kars	100	90.865	Gasterosteus_aculeatus
ENSSDUG00000001202	kars	93	70.841	ENSGAGG00000011960	-	96	73.031	Gopherus_agassizii
ENSSDUG00000001202	kars	99	81.724	ENSGAGG00000023836	KARS	98	81.724	Gopherus_agassizii
ENSSDUG00000001202	kars	99	79.216	ENSGGOG00000005515	KARS	98	79.216	Gorilla_gorilla
ENSSDUG00000001202	kars	100	95.156	ENSHBUG00000013619	kars	100	94.426	Haplochromis_burtoni
ENSSDUG00000001202	kars	99	80.416	ENSHGLG00000011898	KARS	98	80.851	Heterocephalus_glaber_female
ENSSDUG00000001202	kars	99	64.846	ENSHGLG00000001298	-	97	64.846	Heterocephalus_glaber_female
ENSSDUG00000001202	kars	99	71.575	ENSHGLG00000015235	-	97	71.575	Heterocephalus_glaber_female
ENSSDUG00000001202	kars	99	64.676	ENSHGLG00100006466	-	97	64.676	Heterocephalus_glaber_male
ENSSDUG00000001202	kars	99	71.404	ENSHGLG00100012523	-	97	71.404	Heterocephalus_glaber_male
ENSSDUG00000001202	kars	99	80.416	ENSHGLG00100012264	KARS	97	80.416	Heterocephalus_glaber_male
ENSSDUG00000001202	kars	100	91.869	ENSHCOG00000002900	kars	97	91.869	Hippocampus_comes
ENSSDUG00000001202	kars	100	91.522	ENSIPUG00000009862	kars	100	91.522	Ictalurus_punctatus
ENSSDUG00000001202	kars	99	80.241	ENSSTOG00000004205	KARS	98	80.241	Ictidomys_tridecemlineatus
ENSSDUG00000001202	kars	99	80.969	ENSJJAG00000020406	Kars	98	80.969	Jaculus_jaculus
ENSSDUG00000001202	kars	100	92.561	ENSKMAG00000006434	kars	100	92.561	Kryptolebias_marmoratus
ENSSDUG00000001202	kars	100	94.637	ENSLBEG00000026537	kars	100	93.770	Labrus_bergylta
ENSSDUG00000001202	kars	98	82.312	ENSLACG00000006667	KARS	98	79.208	Latimeria_chalumnae
ENSSDUG00000001202	kars	88	75.692	ENSLACG00000016399	-	99	75.692	Latimeria_chalumnae
ENSSDUG00000001202	kars	91	70.644	ENSLOCG00000013608	-	96	70.644	Lepisosteus_oculatus
ENSSDUG00000001202	kars	100	89.465	ENSLOCG00000004002	kars	99	89.465	Lepisosteus_oculatus
ENSSDUG00000001202	kars	98	79.510	ENSLAFG00000015340	KARS	92	79.685	Loxodonta_africana
ENSSDUG00000001202	kars	99	78.535	ENSMFAG00000040024	KARS	98	78.535	Macaca_fascicularis
ENSSDUG00000001202	kars	87	76.893	ENSMNEG00000035832	-	99	76.893	Macaca_nemestrina
ENSSDUG00000001202	kars	99	78.535	ENSMNEG00000042879	-	98	78.535	Macaca_nemestrina
ENSSDUG00000001202	kars	99	78.535	ENSMLEG00000034947	KARS	98	78.535	Mandrillus_leucophaeus
ENSSDUG00000001202	kars	100	93.770	ENSMAMG00000021559	kars	100	93.770	Mastacembelus_armatus
ENSSDUG00000001202	kars	100	95.156	ENSMZEG00005014382	kars	100	94.426	Maylandia_zebra
ENSSDUG00000001202	kars	94	82.234	ENSMGAG00000009000	KARS	97	82.234	Meleagris_gallopavo
ENSSDUG00000001202	kars	99	80.546	ENSMICG00000011997	KARS	98	80.546	Microcebus_murinus
ENSSDUG00000001202	kars	98	82.105	ENSMOCG00000011829	Kars	96	82.105	Microtus_ochrogaster
ENSSDUG00000001202	kars	98	79.123	ENSMOCG00000019029	-	96	79.123	Microtus_ochrogaster
ENSSDUG00000001202	kars	97	93.961	ENSMMOG00000016934	kars	100	93.961	Mola_mola
ENSSDUG00000001202	kars	99	75.000	ENSMODG00000002238	-	88	78.585	Monodelphis_domestica
ENSSDUG00000001202	kars	97	78.445	ENSMODG00000002215	-	98	78.622	Monodelphis_domestica
ENSSDUG00000001202	kars	100	93.080	ENSMALG00000020858	kars	100	93.080	Monopterus_albus
ENSSDUG00000001202	kars	85	80.688	MGP_CAROLIEiJ_G0031588	Kars	96	82.289	Mus_caroli
ENSSDUG00000001202	kars	99	82.087	ENSMUSG00000031948	Kars	97	82.087	Mus_musculus
ENSSDUG00000001202	kars	99	81.391	MGP_PahariEiJ_G0023186	Kars	97	81.391	Mus_pahari
ENSSDUG00000001202	kars	99	81.913	MGP_SPRETEiJ_G0032706	Kars	97	81.913	Mus_spretus
ENSSDUG00000001202	kars	99	78.632	ENSMPUG00000009871	KARS	97	76.346	Mustela_putorius_furo
ENSSDUG00000001202	kars	99	79.553	ENSMLUG00000015119	-	98	79.553	Myotis_lucifugus
ENSSDUG00000001202	kars	81	52.910	ENSMLUG00000026871	-	76	53.333	Myotis_lucifugus
ENSSDUG00000001202	kars	95	80.108	ENSNGAG00000022944	-	95	80.108	Nannospalax_galili
ENSSDUG00000001202	kars	99	79.829	ENSNGAG00000018820	-	98	79.829	Nannospalax_galili
ENSSDUG00000001202	kars	100	94.810	ENSNBRG00000011098	kars	98	94.810	Neolamprologus_brichardi
ENSSDUG00000001202	kars	99	79.387	ENSNLEG00000013072	KARS	98	79.387	Nomascus_leucogenys
ENSSDUG00000001202	kars	97	77.046	ENSMEUG00000008684	KARS	88	79.699	Notamacropus_eugenii
ENSSDUG00000001202	kars	98	80.069	ENSOPRG00000012544	KARS	94	79.896	Ochotona_princeps
ENSSDUG00000001202	kars	99	80.895	ENSODEG00000013099	-	98	80.919	Octodon_degus
ENSSDUG00000001202	kars	97	57.904	ENSODEG00000009464	-	98	57.016	Octodon_degus
ENSSDUG00000001202	kars	100	95.156	ENSONIG00000005937	kars	99	95.156	Oreochromis_niloticus
ENSSDUG00000001202	kars	97	81.272	ENSOANG00000008179	KARS	95	81.272	Ornithorhynchus_anatinus
ENSSDUG00000001202	kars	99	74.744	ENSOCUG00000015553	KARS	98	74.744	Oryctolagus_cuniculus
ENSSDUG00000001202	kars	98	91.873	ENSORLG00000007627	kars	99	90.296	Oryzias_latipes
ENSSDUG00000001202	kars	98	91.696	ENSORLG00020010056	kars	99	90.296	Oryzias_latipes_hni
ENSSDUG00000001202	kars	98	91.873	ENSORLG00015008179	kars	99	90.296	Oryzias_latipes_hsok
ENSSDUG00000001202	kars	99	92.708	ENSOMEG00000001710	kars	99	92.708	Oryzias_melastigma
ENSSDUG00000001202	kars	100	73.569	ENSOGAG00000005903	KARS	99	71.498	Otolemur_garnettii
ENSSDUG00000001202	kars	93	79.781	ENSOARG00000006928	KARS	96	79.781	Ovis_aries
ENSSDUG00000001202	kars	99	79.046	ENSPPAG00000036192	KARS	98	79.046	Pan_paniscus
ENSSDUG00000001202	kars	99	80.069	ENSPPRG00000003027	KARS	98	79.727	Panthera_pardus
ENSSDUG00000001202	kars	99	79.897	ENSPTIG00000008011	KARS	98	79.557	Panthera_tigris_altaica
ENSSDUG00000001202	kars	99	79.216	ENSPTRG00000008364	KARS	98	79.216	Pan_troglodytes
ENSSDUG00000001202	kars	99	78.705	ENSPANG00000024106	KARS	97	75.450	Papio_anubis
ENSSDUG00000001202	kars	100	89.810	ENSPKIG00000009896	kars	100	89.810	Paramormyrops_kingsleyae
ENSSDUG00000001202	kars	97	81.607	ENSPSIG00000009294	KARS	96	81.786	Pelodiscus_sinensis
ENSSDUG00000001202	kars	89	74.464	ENSPSIG00000003041	-	94	74.464	Pelodiscus_sinensis
ENSSDUG00000001202	kars	97	93.594	ENSPMGG00000006117	kars	100	93.594	Periophthalmus_magnuspinnatus
ENSSDUG00000001202	kars	98	81.913	ENSPEMG00000012277	Kars	96	81.913	Peromyscus_maniculatus_bairdii
ENSSDUG00000001202	kars	97	75.311	ENSPMAG00000008360	-	95	73.051	Petromyzon_marinus
ENSSDUG00000001202	kars	99	79.828	ENSPCIG00000010761	-	97	79.828	Phascolarctos_cinereus
ENSSDUG00000001202	kars	98	77.289	ENSPCIG00000025469	-	98	73.693	Phascolarctos_cinereus
ENSSDUG00000001202	kars	99	90.969	ENSPFOG00000013253	kars	99	90.969	Poecilia_formosa
ENSSDUG00000001202	kars	99	91.854	ENSPLAG00000004189	kars	99	91.854	Poecilia_latipinna
ENSSDUG00000001202	kars	99	92.028	ENSPMEG00000015698	kars	99	92.028	Poecilia_mexicana
ENSSDUG00000001202	kars	99	92.028	ENSPREG00000023179	kars	99	92.028	Poecilia_reticulata
ENSSDUG00000001202	kars	97	79.577	ENSPPYG00000007567	KARS	97	75.777	Pongo_abelii
ENSSDUG00000001202	kars	89	75.439	ENSPCAG00000010790	KARS	98	75.439	Procavia_capensis
ENSSDUG00000001202	kars	99	74.826	ENSPCOG00000003166	KARS	88	83.579	Propithecus_coquereli
ENSSDUG00000001202	kars	97	80.810	ENSPVAG00000006746	KARS	97	76.557	Pteropus_vampyrus
ENSSDUG00000001202	kars	100	95.156	ENSPNYG00000013095	kars	100	94.426	Pundamilia_nyererei
ENSSDUG00000001202	kars	100	91.176	ENSPNAG00000013828	kars	100	91.176	Pygocentrus_nattereri
ENSSDUG00000001202	kars	97	80.674	ENSRNOG00000019456	Kars	97	76.471	Rattus_norvegicus
ENSSDUG00000001202	kars	99	78.365	ENSRBIG00000030118	KARS	96	79.049	Rhinopithecus_bieti
ENSSDUG00000001202	kars	98	78.910	ENSRROG00000041418	KARS	96	79.049	Rhinopithecus_roxellana
ENSSDUG00000001202	kars	96	55.888	YDR037W	KRS1	94	55.888	Saccharomyces_cerevisiae
ENSSDUG00000001202	kars	78	33.264	YNL073W	-	82	33.264	Saccharomyces_cerevisiae
ENSSDUG00000001202	kars	99	80.068	ENSSBOG00000019255	KARS	99	80.174	Saimiri_boliviensis_boliviensis
ENSSDUG00000001202	kars	96	69.022	ENSSHAG00000009005	-	96	70.000	Sarcophilus_harrisii
ENSSDUG00000001202	kars	97	66.903	ENSSHAG00000002050	-	91	66.550	Sarcophilus_harrisii
ENSSDUG00000001202	kars	97	75.485	ENSSHAG00000001359	-	98	75.661	Sarcophilus_harrisii
ENSSDUG00000001202	kars	97	89.785	ENSSFOG00015014837	kars	98	89.725	Scleropages_formosus
ENSSDUG00000001202	kars	100	94.983	ENSSMAG00000021441	kars	100	94.983	Scophthalmus_maximus
ENSSDUG00000001202	kars	98	99.291	ENSSLDG00000021220	kars	98	99.468	Seriola_lalandi_dorsalis
ENSSDUG00000001202	kars	76	80.781	ENSSARG00000011493	KARS	79	80.781	Sorex_araneus
ENSSDUG00000001202	kars	99	80.985	ENSSPUG00000004974	KARS	98	81.017	Sphenodon_punctatus
ENSSDUG00000001202	kars	61	68.661	ENSSPUG00000000449	-	82	68.857	Sphenodon_punctatus
ENSSDUG00000001202	kars	100	92.787	ENSSPAG00000020365	kars	97	93.783	Stegastes_partitus
ENSSDUG00000001202	kars	99	79.592	ENSSSCG00000002704	KARS	98	79.592	Sus_scrofa
ENSSDUG00000001202	kars	96	81.475	ENSTGUG00000008400	KARS	99	81.475	Taeniopygia_guttata
ENSSDUG00000001202	kars	100	85.738	ENSTRUG00000017551	kars	100	84.262	Takifugu_rubripes
ENSSDUG00000001202	kars	98	88.007	ENSTNIG00000009351	kars	97	87.057	Tetraodon_nigroviridis
ENSSDUG00000001202	kars	97	62.721	ENSTBEG00000004610	KARS	79	71.772	Tupaia_belangeri
ENSSDUG00000001202	kars	97	80.177	ENSTTRG00000001221	KARS	90	80.354	Tursiops_truncatus
ENSSDUG00000001202	kars	100	77.609	ENSUAMG00000017557	KARS	99	78.511	Ursus_americanus
ENSSDUG00000001202	kars	100	77.609	ENSUMAG00000014559	KARS	99	75.402	Ursus_maritimus
ENSSDUG00000001202	kars	99	77.094	ENSVPAG00000003716	KARS	97	75.041	Vicugna_pacos
ENSSDUG00000001202	kars	99	80.034	ENSVVUG00000024338	KARS	96	81.667	Vulpes_vulpes
ENSSDUG00000001202	kars	100	79.181	ENSXETG00000003569	kars	100	78.157	Xenopus_tropicalis
ENSSDUG00000001202	kars	97	92.665	ENSXCOG00000011313	kars	99	92.665	Xiphophorus_couchianus
ENSSDUG00000001202	kars	99	92.548	ENSXMAG00000003191	kars	99	92.548	Xiphophorus_maculatus