EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001223 (Gene tree)
Gene ID: 111230769
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 22187 bases
Position: chrBDQW01000290.1:3749313-3771499
Accession: 111230769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001601	PAM2	PF07145.15	6.7e-06	1	1
ENSSDUP00000001556	PAM2	PF07145.15	6.7e-06	1	1
ENSSDUP00000001538	PAM2	PF07145.15	6.8e-06	1	1
ENSSDUP00000001601	LsmAD	PF06741.13	1.6e-15	1	1
ENSSDUP00000001556	LsmAD	PF06741.13	1.6e-15	1	1
ENSSDUP00000001538	LsmAD	PF06741.13	1.6e-15	1	1
ENSSDUP00000001601	SM-ATX	PF14438.6	1.8e-20	1	1
ENSSDUP00000001538	SM-ATX	PF14438.6	1.8e-20	1	1
ENSSDUP00000001556	SM-ATX	PF14438.6	2.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001595	-	4869	XM_022757589	ENSSDUP00000001538	1070 (aa)	XP_022613310	UPI000BBEEE94
ENSSDUT00000001658	-	4851	XM_022757591	ENSSDUP00000001601	1064 (aa)	XP_022613312	UPI000BBF044B
ENSSDUT00000001613	-	4854	XM_022757590	ENSSDUP00000001556	1065 (aa)	XP_022613311	UPI000BBE1C73

Gene Model

Click here to download ENSSDUG00000001223's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001223's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001223	atxn2	96	71.186	ENSG00000204842	ATXN2	90	72.727	Homo_sapiens
ENSSDUG00000001223	atxn2	100	94.683	ENSAPOG00000014663	atxn2	100	94.683	Acanthochromis_polyacanthus
ENSSDUG00000001223	atxn2	97	71.475	ENSAMEG00000013747	ATXN2	100	50.399	Ailuropoda_melanoleuca
ENSSDUG00000001223	atxn2	67	79.473	ENSACIG00000004928	atxn2	93	96.057	Amphilophus_citrinellus
ENSSDUG00000001223	atxn2	97	95.965	ENSAOCG00000001107	atxn2	100	94.216	Amphiprion_ocellaris
ENSSDUG00000001223	atxn2	97	96.073	ENSAPEG00000020250	atxn2	100	94.310	Amphiprion_percula
ENSSDUG00000001223	atxn2	92	96.416	ENSATEG00000018587	atxn2	93	96.416	Anabas_testudineus
ENSSDUG00000001223	atxn2	97	71.242	ENSACAG00000002419	ATXN2	96	69.113	Anolis_carolinensis
ENSSDUG00000001223	atxn2	97	70.874	ENSANAG00000022522	ATXN2	96	69.508	Aotus_nancymaae
ENSSDUG00000001223	atxn2	94	93.548	ENSACLG00000013359	atxn2	98	74.815	Astatotilapia_calliptera
ENSSDUG00000001223	atxn2	99	73.532	ENSAMXG00000002342	atxn2	100	70.872	Astyanax_mexicanus
ENSSDUG00000001223	atxn2	96	72.355	ENSBTAG00000022069	ATXN2	100	50.814	Bos_taurus
ENSSDUG00000001223	atxn2	97	70.701	ENSCJAG00000011756	ATXN2	96	62.903	Callithrix_jacchus
ENSSDUG00000001223	atxn2	96	71.864	ENSCAFG00000008606	ATXN2	81	53.431	Canis_familiaris
ENSSDUG00000001223	atxn2	95	72.887	ENSCAFG00020017041	ATXN2	100	45.332	Canis_lupus_dingo
ENSSDUG00000001223	atxn2	97	70.253	ENSCHIG00000012141	ATXN2	82	51.026	Capra_hircus
ENSSDUG00000001223	atxn2	97	71.475	ENSTSYG00000002717	ATXN2	96	70.164	Carlito_syrichta
ENSSDUG00000001223	atxn2	75	51.484	ENSCAPG00000013332	ATXN2	98	51.608	Cavia_aperea
ENSSDUG00000001223	atxn2	97	71.061	ENSCPOG00000001390	ATXN2	96	44.941	Cavia_porcellus
ENSSDUG00000001223	atxn2	97	70.833	ENSCCAG00000026267	ATXN2	96	69.508	Cebus_capucinus
ENSSDUG00000001223	atxn2	96	70.847	ENSCATG00000017877	ATXN2	100	44.959	Cercocebus_atys
ENSSDUG00000001223	atxn2	97	71.569	ENSCLAG00000009324	ATXN2	98	45.965	Chinchilla_lanigera
ENSSDUG00000001223	atxn2	96	71.186	ENSCSAG00000002590	ATXN2	94	46.376	Chlorocebus_sabaeus
ENSSDUG00000001223	atxn2	74	64.929	ENSCHOG00000004284	ATXN2	78	64.929	Choloepus_hoffmanni
ENSSDUG00000001223	atxn2	95	58.896	ENSCPBG00000003465	ATXN2	100	59.182	Chrysemys_picta_bellii
ENSSDUG00000001223	atxn2	97	71.148	ENSCANG00000042302	ATXN2	91	70.000	Colobus_angolensis_palliatus
ENSSDUG00000001223	atxn2	96	63.699	ENSCGRG00001022603	Atxn2	81	61.934	Cricetulus_griseus_chok1gshd
ENSSDUG00000001223	atxn2	97	71.521	ENSCGRG00000015823	Atxn2	95	69.394	Cricetulus_griseus_crigri
ENSSDUG00000001223	atxn2	100	85.354	ENSCSEG00000009072	-	100	84.795	Cynoglossus_semilaevis
ENSSDUG00000001223	atxn2	100	85.927	ENSCSEG00000018366	atxn2	100	86.406	Cynoglossus_semilaevis
ENSSDUG00000001223	atxn2	94	91.209	ENSCVAG00000020160	atxn2	100	86.410	Cyprinodon_variegatus
ENSSDUG00000001223	atxn2	100	80.636	ENSDARG00000052897	atxn2	100	59.948	Danio_rerio
ENSSDUG00000001223	atxn2	96	70.234	ENSDNOG00000015696	ATXN2	96	71.176	Dasypus_novemcinctus
ENSSDUG00000001223	atxn2	94	61.967	ENSDORG00000000808	Atxn2	99	45.315	Dipodomys_ordii
ENSSDUG00000001223	atxn2	90	61.111	ENSETEG00000005224	ATXN2	72	61.765	Echinops_telfairi
ENSSDUG00000001223	atxn2	97	71.895	ENSEASG00005012077	ATXN2	99	58.840	Equus_asinus_asinus
ENSSDUG00000001223	atxn2	97	71.987	ENSECAG00000014347	ATXN2	80	47.814	Equus_caballus
ENSSDUG00000001223	atxn2	73	70.164	ENSEEUG00000014635	-	71	70.164	Erinaceus_europaeus
ENSSDUG00000001223	atxn2	97	72.312	ENSELUG00000019632	atxn2	99	71.741	Esox_lucius
ENSSDUG00000001223	atxn2	96	71.864	ENSFCAG00000003178	ATXN2	96	64.918	Felis_catus
ENSSDUG00000001223	atxn2	97	72.131	ENSFDAG00000020942	ATXN2	96	69.939	Fukomys_damarensis
ENSSDUG00000001223	atxn2	89	88.703	ENSFHEG00000019561	atxn2	98	88.844	Fundulus_heteroclitus
ENSSDUG00000001223	atxn2	88	93.056	ENSGMOG00000007412	atxn2	93	74.528	Gadus_morhua
ENSSDUG00000001223	atxn2	97	68.078	ENSGALG00000004625	ATXN2	96	67.638	Gallus_gallus
ENSSDUG00000001223	atxn2	93	94.444	ENSGAFG00000003302	atxn2	99	87.034	Gambusia_affinis
ENSSDUG00000001223	atxn2	96	96.528	ENSGACG00000006295	atxn2	100	67.748	Gasterosteus_aculeatus
ENSSDUG00000001223	atxn2	95	59.923	ENSGAGG00000005014	ATXN2	100	60.213	Gopherus_agassizii
ENSSDUG00000001223	atxn2	98	69.304	ENSGGOG00000002137	ATXN2	91	70.000	Gorilla_gorilla
ENSSDUG00000001223	atxn2	97	91.483	ENSHBUG00000002921	atxn2	100	90.056	Haplochromis_burtoni
ENSSDUG00000001223	atxn2	97	72.131	ENSHGLG00100019351	ATXN2	96	69.939	Heterocephalus_glaber_male
ENSSDUG00000001223	atxn2	99	84.137	ENSHCOG00000005278	atxn2	96	85.430	Hippocampus_comes
ENSSDUG00000001223	atxn2	97	69.516	ENSIPUG00000016649	atxn2	100	68.687	Ictalurus_punctatus
ENSSDUG00000001223	atxn2	97	71.475	ENSSTOG00000000978	ATXN2	92	69.697	Ictidomys_tridecemlineatus
ENSSDUG00000001223	atxn2	100	88.651	ENSKMAG00000000980	atxn2	100	88.558	Kryptolebias_marmoratus
ENSSDUG00000001223	atxn2	60	81.534	ENSLBEG00000017484	atxn2	99	80.586	Labrus_bergylta
ENSSDUG00000001223	atxn2	94	82.792	ENSLOCG00000007880	atxn2	91	82.792	Lepisosteus_oculatus
ENSSDUG00000001223	atxn2	97	71.569	ENSLAFG00000007416	ATXN2	95	71.569	Loxodonta_africana
ENSSDUG00000001223	atxn2	96	70.847	ENSMFAG00000000374	ATXN2	91	69.545	Macaca_fascicularis
ENSSDUG00000001223	atxn2	95	71.972	ENSMMUG00000002226	ATXN2	91	69.545	Macaca_mulatta
ENSSDUG00000001223	atxn2	96	70.847	ENSMNEG00000035588	ATXN2	100	44.959	Macaca_nemestrina
ENSSDUG00000001223	atxn2	97	70.820	ENSMLEG00000024324	ATXN2	91	69.545	Mandrillus_leucophaeus
ENSSDUG00000001223	atxn2	97	94.140	ENSMAMG00000019160	atxn2	98	94.044	Mastacembelus_armatus
ENSSDUG00000001223	atxn2	97	91.388	ENSMZEG00005008476	atxn2	100	89.963	Maylandia_zebra
ENSSDUG00000001223	atxn2	97	72.549	ENSMGAG00000005288	ATXN2	96	70.336	Meleagris_gallopavo
ENSSDUG00000001223	atxn2	66	52.241	ENSMAUG00000008223	-	98	52.448	Mesocricetus_auratus
ENSSDUG00000001223	atxn2	95	72.535	ENSMICG00000013541	ATXN2	96	70.164	Microcebus_murinus
ENSSDUG00000001223	atxn2	66	52.661	ENSMOCG00000005219	Atxn2	92	70.130	Microtus_ochrogaster
ENSSDUG00000001223	atxn2	92	95.341	ENSMMOG00000013189	atxn2	98	87.674	Mola_mola
ENSSDUG00000001223	atxn2	98	71.293	ENSMODG00000012221	ATXN2	80	72.638	Monodelphis_domestica
ENSSDUG00000001223	atxn2	98	91.437	ENSMALG00000018529	atxn2	99	91.437	Monopterus_albus
ENSSDUG00000001223	atxn2	96	69.966	MGP_CAROLIEiJ_G0027692	Atxn2	91	67.470	Mus_caroli
ENSSDUG00000001223	atxn2	96	70.307	ENSMUSG00000042605	Atxn2	92	67.965	Mus_musculus
ENSSDUG00000001223	atxn2	66	52.381	MGP_PahariEiJ_G0024272	Atxn2	98	51.469	Mus_pahari
ENSSDUG00000001223	atxn2	66	52.241	MGP_SPRETEiJ_G0028690	Atxn2	98	54.938	Mus_spretus
ENSSDUG00000001223	atxn2	97	65.246	ENSMPUG00000002212	ATXN2	100	45.575	Mustela_putorius_furo
ENSSDUG00000001223	atxn2	97	71.753	ENSMLUG00000015559	ATXN2	100	45.622	Myotis_lucifugus
ENSSDUG00000001223	atxn2	92	94.982	ENSNBRG00000015794	atxn2	93	94.982	Neolamprologus_brichardi
ENSSDUG00000001223	atxn2	96	71.186	ENSNLEG00000000484	ATXN2	91	70.000	Nomascus_leucogenys
ENSSDUG00000001223	atxn2	83	76.433	ENSMEUG00000012244	-	82	75.000	Notamacropus_eugenii
ENSSDUG00000001223	atxn2	96	63.481	ENSOPRG00000014599	ATXN2	96	61.783	Ochotona_princeps
ENSSDUG00000001223	atxn2	95	72.535	ENSODEG00000010798	ATXN2	100	45.308	Octodon_degus
ENSSDUG00000001223	atxn2	94	95.098	ENSONIG00000014521	atxn2	92	95.098	Oreochromis_niloticus
ENSSDUG00000001223	atxn2	83	78.981	ENSOANG00000004796	ATXN2	100	47.523	Ornithorhynchus_anatinus
ENSSDUG00000001223	atxn2	97	69.935	ENSOCUG00000002855	ATXN2	68	67.890	Oryctolagus_cuniculus
ENSSDUG00000001223	atxn2	92	86.322	ENSORLG00000003606	atxn2	99	86.018	Oryzias_latipes
ENSSDUG00000001223	atxn2	97	84.667	ENSORLG00020000785	atxn2	99	84.770	Oryzias_latipes_hni
ENSSDUG00000001223	atxn2	97	85.591	ENSORLG00015012345	atxn2	99	85.632	Oryzias_latipes_hsok
ENSSDUG00000001223	atxn2	97	86.564	ENSOMEG00000020080	atxn2	99	86.852	Oryzias_melastigma
ENSSDUG00000001223	atxn2	96	71.186	ENSOGAG00000000609	ATXN2	80	68.976	Otolemur_garnettii
ENSSDUG00000001223	atxn2	97	71.753	ENSOARG00000018223	ATXN2	100	51.150	Ovis_aries
ENSSDUG00000001223	atxn2	97	70.550	ENSPPAG00000028043	ATXN2	91	70.000	Pan_paniscus
ENSSDUG00000001223	atxn2	96	72.203	ENSPPRG00000003573	ATXN2	96	65.246	Panthera_pardus
ENSSDUG00000001223	atxn2	97	71.382	ENSPTIG00000021122	ATXN2	96	70.492	Panthera_tigris_altaica
ENSSDUG00000001223	atxn2	98	69.304	ENSPTRG00000029540	ATXN2	91	70.000	Pan_troglodytes
ENSSDUG00000001223	atxn2	96	71.331	ENSPANG00000017168	ATXN2	91	69.545	Papio_anubis
ENSSDUG00000001223	atxn2	97	73.092	ENSPKIG00000023134	atxn2	99	72.371	Paramormyrops_kingsleyae
ENSSDUG00000001223	atxn2	95	91.398	ENSPMGG00000005074	atxn2	100	68.449	Periophthalmus_magnuspinnatus
ENSSDUG00000001223	atxn2	80	72.381	ENSPEMG00000015340	Atxn2	92	69.264	Peromyscus_maniculatus_bairdii
ENSSDUG00000001223	atxn2	95	39.049	ENSPMAG00000004603	atxn2	98	41.193	Petromyzon_marinus
ENSSDUG00000001223	atxn2	58	68.468	ENSPCIG00000006165	-	92	69.951	Phascolarctos_cinereus
ENSSDUG00000001223	atxn2	97	87.246	ENSPLAG00000015241	atxn2	100	87.242	Poecilia_latipinna
ENSSDUG00000001223	atxn2	97	87.536	ENSPMEG00000016681	atxn2	100	87.523	Poecilia_mexicana
ENSSDUG00000001223	atxn2	95	93.728	ENSPREG00000014825	atxn2	94	93.728	Poecilia_reticulata
ENSSDUG00000001223	atxn2	96	70.847	ENSPPYG00000004963	ATXN2	86	46.201	Pongo_abelii
ENSSDUG00000001223	atxn2	94	70.504	ENSPCOG00000022031	ATXN2	96	68.889	Propithecus_coquereli
ENSSDUG00000001223	atxn2	96	71.864	ENSPVAG00000013179	ATXN2	78	69.277	Pteropus_vampyrus
ENSSDUG00000001223	atxn2	60	76.369	ENSPNYG00000016981	atxn2	98	76.198	Pundamilia_nyererei
ENSSDUG00000001223	atxn2	100	74.884	ENSPNAG00000010889	atxn2	100	72.130	Pygocentrus_nattereri
ENSSDUG00000001223	atxn2	97	70.874	ENSRNOG00000001256	Atxn2	95	68.788	Rattus_norvegicus
ENSSDUG00000001223	atxn2	96	68.475	ENSRBIG00000039212	ATXN2	91	70.000	Rhinopithecus_bieti
ENSSDUG00000001223	atxn2	97	71.197	ENSRROG00000031170	ATXN2	100	44.727	Rhinopithecus_roxellana
ENSSDUG00000001223	atxn2	95	71.831	ENSSBOG00000031563	ATXN2	96	69.508	Saimiri_boliviensis_boliviensis
ENSSDUG00000001223	atxn2	97	72.078	ENSSHAG00000007304	ATXN2	96	69.909	Sarcophilus_harrisii
ENSSDUG00000001223	atxn2	95	82.500	ENSSFOG00015017229	atxn2	100	58.639	Scleropages_formosus
ENSSDUG00000001223	atxn2	97	94.197	ENSSMAG00000004627	atxn2	100	92.488	Scophthalmus_maximus
ENSSDUG00000001223	atxn2	92	100.000	ENSSLDG00000019837	atxn2	100	78.249	Seriola_lalandi_dorsalis
ENSSDUG00000001223	atxn2	70	70.370	ENSSARG00000006291	ATXN2	68	69.547	Sorex_araneus
ENSSDUG00000001223	atxn2	96	72.241	ENSSPUG00000010317	ATXN2	88	70.000	Sphenodon_punctatus
ENSSDUG00000001223	atxn2	99	94.831	ENSSPAG00000000377	atxn2	100	94.831	Stegastes_partitus
ENSSDUG00000001223	atxn2	96	71.525	ENSSSCG00000009834	ATXN2	94	58.278	Sus_scrofa
ENSSDUG00000001223	atxn2	97	57.339	ENSTGUG00000006497	ATXN2	100	58.059	Taeniopygia_guttata
ENSSDUG00000001223	atxn2	97	90.909	ENSTRUG00000016801	atxn2	99	87.273	Takifugu_rubripes
ENSSDUG00000001223	atxn2	82	68.462	ENSTBEG00000001985	ATXN2	80	68.462	Tupaia_belangeri
ENSSDUG00000001223	atxn2	85	68.475	ENSTTRG00000000952	ATXN2	73	66.564	Tursiops_truncatus
ENSSDUG00000001223	atxn2	96	71.864	ENSUAMG00000025295	ATXN2	91	69.184	Ursus_americanus
ENSSDUG00000001223	atxn2	95	72.887	ENSUMAG00000007315	ATXN2	100	50.181	Ursus_maritimus
ENSSDUG00000001223	atxn2	87	72.527	ENSVPAG00000005940	ATXN2	90	53.691	Vicugna_pacos
ENSSDUG00000001223	atxn2	95	72.887	ENSVVUG00000016107	ATXN2	100	45.422	Vulpes_vulpes
ENSSDUG00000001223	atxn2	93	68.771	ENSXETG00000020912	atxn2	99	49.185	Xenopus_tropicalis
ENSSDUG00000001223	atxn2	60	78.650	ENSXCOG00000010001	atxn2	99	78.179	Xiphophorus_couchianus
ENSSDUG00000001223	atxn2	97	86.840	ENSXMAG00000003481	atxn2	100	87.407	Xiphophorus_maculatus