EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001234 (Gene tree)
Gene ID: 111236053
Gene Symbol: mrpl17
Alias: zgc:103551
Full Name: mitochondrial ribosomal protein L17
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2326 bases
Position: chrBDQW01000551.1:368238-370563
Accession: 111236053
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001551	Ribosomal_L17	PF01196.19	8.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001608	-	747	XM_022764660	ENSSDUP00000001551	165 (aa)	XP_022620381	UPI000BBE2EFB

Gene Model

Click here to download ENSSDUG00000001234's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001234's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001234	mrpl17	100	64.848	ENSG00000158042	MRPL17	94	64.848	Homo_sapiens
ENSSDUG00000001234	mrpl17	99	94.512	ENSAPOG00000014937	mrpl17	99	94.512	Acanthochromis_polyacanthus
ENSSDUG00000001234	mrpl17	81	69.403	ENSAMEG00000016246	MRPL17	91	64.968	Ailuropoda_melanoleuca
ENSSDUG00000001234	mrpl17	99	95.732	ENSACIG00000011247	mrpl17	99	95.732	Amphilophus_citrinellus
ENSSDUG00000001234	mrpl17	59	42.424	ENSACIG00000010456	-	69	42.424	Amphilophus_citrinellus
ENSSDUG00000001234	mrpl17	99	95.732	ENSAOCG00000009243	mrpl17	99	95.732	Amphiprion_ocellaris
ENSSDUG00000001234	mrpl17	99	95.732	ENSAPEG00000009301	mrpl17	99	95.732	Amphiprion_percula
ENSSDUG00000001234	mrpl17	100	93.939	ENSATEG00000018777	mrpl17	100	93.939	Anabas_testudineus
ENSSDUG00000001234	mrpl17	97	67.081	ENSACAG00000009480	MRPL17	93	67.081	Anolis_carolinensis
ENSSDUG00000001234	mrpl17	100	64.242	ENSANAG00000019957	MRPL17	94	64.242	Aotus_nancymaae
ENSSDUG00000001234	mrpl17	99	91.463	ENSACLG00000027400	mrpl17	99	91.463	Astatotilapia_calliptera
ENSSDUG00000001234	mrpl17	96	84.277	ENSAMXG00000015294	mrpl17	91	84.277	Astyanax_mexicanus
ENSSDUG00000001234	mrpl17	95	64.968	ENSBTAG00000024781	MRPL17	91	64.968	Bos_taurus
ENSSDUG00000001234	mrpl17	86	31.515	WBGene00021829	mrpl-17	85	31.515	Caenorhabditis_elegans
ENSSDUG00000001234	mrpl17	100	63.636	ENSCJAG00000038483	MRPL17	94	63.636	Callithrix_jacchus
ENSSDUG00000001234	mrpl17	81	70.149	ENSCAFG00000006589	MRPL17	75	64.968	Canis_familiaris
ENSSDUG00000001234	mrpl17	81	70.149	ENSCAFG00020009746	MRPL17	91	64.968	Canis_lupus_dingo
ENSSDUG00000001234	mrpl17	81	67.910	ENSCHIG00000015842	MRPL17	91	63.694	Capra_hircus
ENSSDUG00000001234	mrpl17	81	70.149	ENSTSYG00000027878	MRPL17	93	64.024	Carlito_syrichta
ENSSDUG00000001234	mrpl17	95	67.308	ENSCPOG00000032658	MRPL17	89	67.308	Cavia_porcellus
ENSSDUG00000001234	mrpl17	100	64.242	ENSCCAG00000025049	MRPL17	94	64.242	Cebus_capucinus
ENSSDUG00000001234	mrpl17	100	64.242	ENSCATG00000035650	MRPL17	94	64.242	Cercocebus_atys
ENSSDUG00000001234	mrpl17	81	70.896	ENSCLAG00000015854	MRPL17	86	69.136	Chinchilla_lanigera
ENSSDUG00000001234	mrpl17	99	64.634	ENSCSAG00000004367	MRPL17	88	64.634	Chlorocebus_sabaeus
ENSSDUG00000001234	mrpl17	95	71.795	ENSCPBG00000000499	MRPL17	87	71.795	Chrysemys_picta_bellii
ENSSDUG00000001234	mrpl17	90	41.722	ENSCING00000004204	-	90	41.722	Ciona_intestinalis
ENSSDUG00000001234	mrpl17	92	41.558	ENSCSAVG00000011072	-	94	41.558	Ciona_savignyi
ENSSDUG00000001234	mrpl17	81	72.388	ENSCANG00000042315	MRPL17	94	65.455	Colobus_angolensis_palliatus
ENSSDUG00000001234	mrpl17	85	68.794	ENSCGRG00000004658	Mrpl17	89	66.026	Cricetulus_griseus_crigri
ENSSDUG00000001234	mrpl17	100	89.697	ENSCSEG00000015170	mrpl17	98	89.697	Cynoglossus_semilaevis
ENSSDUG00000001234	mrpl17	100	92.121	ENSCVAG00000015116	mrpl17	100	92.121	Cyprinodon_variegatus
ENSSDUG00000001234	mrpl17	99	82.317	ENSDARG00000075677	mrpl17	99	82.317	Danio_rerio
ENSSDUG00000001234	mrpl17	98	66.258	ENSDNOG00000047312	-	65	66.258	Dasypus_novemcinctus
ENSSDUG00000001234	mrpl17	85	67.606	ENSDORG00000026555	Mrpl17	86	69.136	Dipodomys_ordii
ENSSDUG00000001234	mrpl17	85	68.085	ENSETEG00000008580	MRPL17	90	66.038	Echinops_telfairi
ENSSDUG00000001234	mrpl17	95	60.256	ENSEBUG00000013244	mrpl17	78	60.256	Eptatretus_burgeri
ENSSDUG00000001234	mrpl17	81	70.896	ENSEASG00005003093	MRPL17	91	66.242	Equus_asinus_asinus
ENSSDUG00000001234	mrpl17	81	70.896	ENSECAG00000010156	MRPL17	91	66.242	Equus_caballus
ENSSDUG00000001234	mrpl17	100	63.030	ENSEEUG00000013026	MRPL17	96	63.030	Erinaceus_europaeus
ENSSDUG00000001234	mrpl17	99	88.344	ENSELUG00000020191	mrpl17	97	88.344	Esox_lucius
ENSSDUG00000001234	mrpl17	81	70.149	ENSFCAG00000036047	MRPL17	78	65.605	Felis_catus
ENSSDUG00000001234	mrpl17	85	69.014	ENSFDAG00000013150	MRPL17	89	66.667	Fukomys_damarensis
ENSSDUG00000001234	mrpl17	100	92.121	ENSFHEG00000006763	mrpl17	100	92.121	Fundulus_heteroclitus
ENSSDUG00000001234	mrpl17	95	88.535	ENSGMOG00000013596	mrpl17	89	88.535	Gadus_morhua
ENSSDUG00000001234	mrpl17	99	66.258	ENSGALG00000002605	MRPL17	99	66.258	Gallus_gallus
ENSSDUG00000001234	mrpl17	100	89.820	ENSGAFG00000010332	mrpl17	100	89.820	Gambusia_affinis
ENSSDUG00000001234	mrpl17	99	84.146	ENSGACG00000003236	mrpl17	97	84.146	Gasterosteus_aculeatus
ENSSDUG00000001234	mrpl17	56	65.979	ENSGAGG00000000396	MRPL17	91	65.979	Gopherus_agassizii
ENSSDUG00000001234	mrpl17	100	64.848	ENSGGOG00000038003	MRPL17	94	64.848	Gorilla_gorilla
ENSSDUG00000001234	mrpl17	99	92.683	ENSHBUG00000017678	mrpl17	99	92.683	Haplochromis_burtoni
ENSSDUG00000001234	mrpl17	95	66.667	ENSHGLG00000006859	MRPL17	92	65.517	Heterocephalus_glaber_female
ENSSDUG00000001234	mrpl17	95	66.667	ENSHGLG00100013588	MRPL17	89	66.667	Heterocephalus_glaber_male
ENSSDUG00000001234	mrpl17	97	85.000	ENSHCOG00000011399	mrpl17	98	85.000	Hippocampus_comes
ENSSDUG00000001234	mrpl17	96	81.761	ENSIPUG00000018383	MRPL17	94	81.761	Ictalurus_punctatus
ENSSDUG00000001234	mrpl17	54	57.798	ENSSTOG00000003313	-	100	57.798	Ictidomys_tridecemlineatus
ENSSDUG00000001234	mrpl17	81	70.149	ENSJJAG00000022535	Mrpl17	90	65.409	Jaculus_jaculus
ENSSDUG00000001234	mrpl17	100	88.485	ENSKMAG00000011240	mrpl17	99	88.485	Kryptolebias_marmoratus
ENSSDUG00000001234	mrpl17	100	95.758	ENSLBEG00000003781	mrpl17	100	95.758	Labrus_bergylta
ENSSDUG00000001234	mrpl17	95	67.308	ENSLACG00000015317	MRPL17	87	67.308	Latimeria_chalumnae
ENSSDUG00000001234	mrpl17	100	76.364	ENSLOCG00000004435	mrpl17	99	76.364	Lepisosteus_oculatus
ENSSDUG00000001234	mrpl17	85	67.376	ENSLAFG00000004834	MRPL17	90	66.038	Loxodonta_africana
ENSSDUG00000001234	mrpl17	100	64.242	ENSMFAG00000005488	MRPL17	94	64.242	Macaca_fascicularis
ENSSDUG00000001234	mrpl17	100	64.242	ENSMMUG00000004544	MRPL17	94	64.242	Macaca_mulatta
ENSSDUG00000001234	mrpl17	100	64.242	ENSMNEG00000031071	MRPL17	94	64.242	Macaca_nemestrina
ENSSDUG00000001234	mrpl17	100	64.242	ENSMLEG00000040344	MRPL17	94	64.242	Mandrillus_leucophaeus
ENSSDUG00000001234	mrpl17	100	90.909	ENSMAMG00000005242	mrpl17	97	90.909	Mastacembelus_armatus
ENSSDUG00000001234	mrpl17	99	92.683	ENSMZEG00005003468	mrpl17	99	92.683	Maylandia_zebra
ENSSDUG00000001234	mrpl17	85	68.085	ENSMAUG00000005494	Mrpl17	100	56.757	Mesocricetus_auratus
ENSSDUG00000001234	mrpl17	81	70.896	ENSMICG00000035814	MRPL17	95	64.242	Microcebus_murinus
ENSSDUG00000001234	mrpl17	85	70.922	ENSMOCG00000018077	Mrpl17	89	67.949	Microtus_ochrogaster
ENSSDUG00000001234	mrpl17	99	93.902	ENSMMOG00000015377	mrpl17	99	93.902	Mola_mola
ENSSDUG00000001234	mrpl17	96	64.780	ENSMODG00000018267	MRPL17	100	64.780	Monodelphis_domestica
ENSSDUG00000001234	mrpl17	100	93.333	ENSMALG00000013904	mrpl17	100	93.333	Monopterus_albus
ENSSDUG00000001234	mrpl17	81	73.134	MGP_CAROLIEiJ_G0030241	Mrpl17	100	59.459	Mus_caroli
ENSSDUG00000001234	mrpl17	81	73.134	ENSMUSG00000030879	Mrpl17	100	59.459	Mus_musculus
ENSSDUG00000001234	mrpl17	81	73.134	MGP_PahariEiJ_G0013456	Mrpl17	100	59.459	Mus_pahari
ENSSDUG00000001234	mrpl17	81	73.134	MGP_SPRETEiJ_G0031353	Mrpl17	100	59.459	Mus_spretus
ENSSDUG00000001234	mrpl17	86	66.197	ENSMPUG00000018502	-	91	63.694	Mustela_putorius_furo
ENSSDUG00000001234	mrpl17	86	66.901	ENSMPUG00000005449	-	74	64.331	Mustela_putorius_furo
ENSSDUG00000001234	mrpl17	95	66.879	ENSMLUG00000001144	MRPL17	91	66.879	Myotis_lucifugus
ENSSDUG00000001234	mrpl17	81	70.896	ENSNGAG00000012128	Mrpl17	95	64.072	Nannospalax_galili
ENSSDUG00000001234	mrpl17	99	92.683	ENSNBRG00000015689	mrpl17	99	92.683	Neolamprologus_brichardi
ENSSDUG00000001234	mrpl17	100	64.848	ENSNLEG00000032707	MRPL17	94	64.848	Nomascus_leucogenys
ENSSDUG00000001234	mrpl17	96	65.409	ENSMEUG00000013588	-	100	65.409	Notamacropus_eugenii
ENSSDUG00000001234	mrpl17	81	72.388	ENSOPRG00000008141	MRPL17	95	65.868	Ochotona_princeps
ENSSDUG00000001234	mrpl17	95	68.590	ENSODEG00000009556	MRPL17	89	68.590	Octodon_degus
ENSSDUG00000001234	mrpl17	99	92.683	ENSONIG00000011427	mrpl17	99	92.683	Oreochromis_niloticus
ENSSDUG00000001234	mrpl17	71	56.410	ENSOANG00000007173	-	91	56.410	Ornithorhynchus_anatinus
ENSSDUG00000001234	mrpl17	78	69.767	ENSOCUG00000005726	MRPL17	89	66.026	Oryctolagus_cuniculus
ENSSDUG00000001234	mrpl17	100	91.515	ENSORLG00000028920	mrpl17	100	91.515	Oryzias_latipes
ENSSDUG00000001234	mrpl17	100	91.515	ENSORLG00020000015	mrpl17	100	91.515	Oryzias_latipes_hni
ENSSDUG00000001234	mrpl17	100	91.515	ENSORLG00015005891	mrpl17	100	91.515	Oryzias_latipes_hsok
ENSSDUG00000001234	mrpl17	100	83.636	ENSOMEG00000019409	mrpl17	99	83.636	Oryzias_melastigma
ENSSDUG00000001234	mrpl17	85	68.085	ENSOGAG00000014856	MRPL17	93	65.031	Otolemur_garnettii
ENSSDUG00000001234	mrpl17	81	68.657	ENSOARG00000016577	MRPL17	91	64.331	Ovis_aries
ENSSDUG00000001234	mrpl17	100	64.848	ENSPPAG00000038749	MRPL17	94	64.848	Pan_paniscus
ENSSDUG00000001234	mrpl17	81	70.149	ENSPPRG00000022075	MRPL17	91	65.605	Panthera_pardus
ENSSDUG00000001234	mrpl17	81	70.149	ENSPTIG00000014738	MRPL17	78	65.605	Panthera_tigris_altaica
ENSSDUG00000001234	mrpl17	100	64.848	ENSPTRG00000044450	MRPL17	94	64.848	Pan_troglodytes
ENSSDUG00000001234	mrpl17	100	64.242	ENSPANG00000025791	MRPL17	94	64.242	Papio_anubis
ENSSDUG00000001234	mrpl17	100	80.606	ENSPKIG00000021330	mrpl17	99	80.606	Paramormyrops_kingsleyae
ENSSDUG00000001234	mrpl17	100	93.939	ENSPMGG00000018670	mrpl17	100	93.939	Periophthalmus_magnuspinnatus
ENSSDUG00000001234	mrpl17	81	71.642	ENSPEMG00000012735	Mrpl17	89	66.667	Peromyscus_maniculatus_bairdii
ENSSDUG00000001234	mrpl17	100	64.848	ENSPCIG00000010796	MRPL17	99	64.848	Phascolarctos_cinereus
ENSSDUG00000001234	mrpl17	100	89.820	ENSPFOG00000003148	mrpl17	100	89.820	Poecilia_formosa
ENSSDUG00000001234	mrpl17	100	89.820	ENSPLAG00000007818	mrpl17	100	89.820	Poecilia_latipinna
ENSSDUG00000001234	mrpl17	96	92.453	ENSPMEG00000011833	mrpl17	95	92.453	Poecilia_mexicana
ENSSDUG00000001234	mrpl17	100	89.222	ENSPREG00000014661	mrpl17	100	89.222	Poecilia_reticulata
ENSSDUG00000001234	mrpl17	100	64.848	ENSPPYG00000003534	MRPL17	94	64.848	Pongo_abelii
ENSSDUG00000001234	mrpl17	81	71.642	ENSPCAG00000018837	-	90	66.038	Procavia_capensis
ENSSDUG00000001234	mrpl17	81	71.642	ENSPCAG00000018799	-	90	66.038	Procavia_capensis
ENSSDUG00000001234	mrpl17	81	50.376	ENSPCOG00000011215	-	91	48.466	Propithecus_coquereli
ENSSDUG00000001234	mrpl17	81	69.403	ENSPCOG00000014817	-	93	64.024	Propithecus_coquereli
ENSSDUG00000001234	mrpl17	95	64.968	ENSPVAG00000006422	MRPL17	92	64.968	Pteropus_vampyrus
ENSSDUG00000001234	mrpl17	99	92.683	ENSPNYG00000015200	mrpl17	99	92.683	Pundamilia_nyererei
ENSSDUG00000001234	mrpl17	98	85.802	ENSPNAG00000026698	mrpl17	98	85.802	Pygocentrus_nattereri
ENSSDUG00000001234	mrpl17	81	72.388	ENSRNOG00000019497	Mrpl17	89	67.308	Rattus_norvegicus
ENSSDUG00000001234	mrpl17	81	71.642	ENSRBIG00000040233	MRPL17	98	65.031	Rhinopithecus_bieti
ENSSDUG00000001234	mrpl17	81	71.642	ENSRROG00000032283	MRPL17	96	64.242	Rhinopithecus_roxellana
ENSSDUG00000001234	mrpl17	100	64.242	ENSSBOG00000031626	MRPL17	94	64.242	Saimiri_boliviensis_boliviensis
ENSSDUG00000001234	mrpl17	96	64.151	ENSSHAG00000010208	MRPL17	96	64.151	Sarcophilus_harrisii
ENSSDUG00000001234	mrpl17	100	79.394	ENSSFOG00015021634	mrpl17	99	79.394	Scleropages_formosus
ENSSDUG00000001234	mrpl17	100	92.727	ENSSMAG00000006719	mrpl17	100	92.727	Scophthalmus_maximus
ENSSDUG00000001234	mrpl17	100	100.000	ENSSLDG00000000596	mrpl17	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000001234	mrpl17	99	67.273	ENSSPUG00000015486	MRPL17	98	67.273	Sphenodon_punctatus
ENSSDUG00000001234	mrpl17	99	92.638	ENSSPAG00000000386	mrpl17	99	92.638	Stegastes_partitus
ENSSDUG00000001234	mrpl17	81	70.149	ENSSSCG00000024693	MRPL17	93	65.605	Sus_scrofa
ENSSDUG00000001234	mrpl17	95	64.744	ENSTGUG00000001893	MRPL17	95	64.744	Taeniopygia_guttata
ENSSDUG00000001234	mrpl17	96	74.227	ENSTRUG00000022925	mrpl17	98	74.227	Takifugu_rubripes
ENSSDUG00000001234	mrpl17	96	89.937	ENSTNIG00000008195	mrpl17	100	89.937	Tetraodon_nigroviridis
ENSSDUG00000001234	mrpl17	81	69.403	ENSTTRG00000004903	MRPL17	91	64.968	Tursiops_truncatus
ENSSDUG00000001234	mrpl17	81	70.149	ENSUAMG00000025644	MRPL17	74	65.605	Ursus_americanus
ENSSDUG00000001234	mrpl17	81	70.149	ENSUMAG00000000411	MRPL17	74	65.605	Ursus_maritimus
ENSSDUG00000001234	mrpl17	81	68.657	ENSVPAG00000008874	MRPL17	93	63.694	Vicugna_pacos
ENSSDUG00000001234	mrpl17	81	69.403	ENSVVUG00000024084	MRPL17	72	64.331	Vulpes_vulpes
ENSSDUG00000001234	mrpl17	96	63.522	ENSXETG00000027295	mrpl17	94	63.522	Xenopus_tropicalis
ENSSDUG00000001234	mrpl17	96	90.566	ENSXCOG00000019115	mrpl17	96	90.566	Xiphophorus_couchianus
ENSSDUG00000001234	mrpl17	100	89.091	ENSXMAG00000006741	mrpl17	100	89.091	Xiphophorus_maculatus