EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001268 (Gene tree)
Gene ID: 111229431
Gene Symbol: si:dkey-93h22.8
Alias: fc32h05|fi41c08|im:7140483|wu:fc32h05|wu:fi41c08
Full Name: peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8721 bases
Position: chrBDQW01000230.1:1662009-1670729
Accession: 111229431
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001603	RRM_1	PF00076.22	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001660	-	4769	XM_022755762	ENSSDUP00000001603	1228 (aa)	XP_022611483	UPI000BBF0143

Gene Model

Click here to download ENSSDUG00000001268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001268	si:dkey-93h22.8	100	62.660	ENSAPEG00000014568	si:dkey-93h22.8	100	63.563	Amphiprion_percula
ENSSDUG00000001268	si:dkey-93h22.8	62	63.813	ENSATEG00000020218	-	99	63.554	Anabas_testudineus
ENSSDUG00000001268	si:dkey-93h22.8	99	61.409	ENSACLG00000019359	-	96	61.107	Astatotilapia_calliptera
ENSSDUG00000001268	si:dkey-93h22.8	52	65.909	ENSAMXG00000020783	si:dkey-93h22.8	51	67.961	Astyanax_mexicanus
ENSSDUG00000001268	si:dkey-93h22.8	82	68.354	ENSELUG00000018785	-	84	68.354	Esox_lucius
ENSSDUG00000001268	si:dkey-93h22.8	86	83.544	ENSGAFG00000011120	si:dkey-93h22.8	88	83.974	Gambusia_affinis
ENSSDUG00000001268	si:dkey-93h22.8	99	61.890	ENSHBUG00000019347	-	96	61.557	Haplochromis_burtoni
ENSSDUG00000001268	si:dkey-93h22.8	64	36.588	ENSHCOG00000015325	-	69	37.158	Hippocampus_comes
ENSSDUG00000001268	si:dkey-93h22.8	100	61.890	ENSMAMG00000011169	-	100	63.331	Mastacembelus_armatus
ENSSDUG00000001268	si:dkey-93h22.8	99	61.409	ENSMZEG00005008228	-	99	61.107	Maylandia_zebra
ENSSDUG00000001268	si:dkey-93h22.8	100	65.020	ENSMALG00000005052	-	99	65.020	Monopterus_albus
ENSSDUG00000001268	si:dkey-93h22.8	71	75.159	ENSORLG00000012355	si:dkey-93h22.8	81	75.641	Oryzias_latipes
ENSSDUG00000001268	si:dkey-93h22.8	71	75.796	ENSORLG00020004449	si:dkey-93h22.8	80	76.282	Oryzias_latipes_hni
ENSSDUG00000001268	si:dkey-93h22.8	72	76.875	ENSORLG00015002960	si:dkey-93h22.8	80	76.923	Oryzias_latipes_hsok
ENSSDUG00000001268	si:dkey-93h22.8	74	76.582	ENSOMEG00000012140	si:dkey-93h22.8	75	76.923	Oryzias_melastigma
ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	ENSPFOG00000001320	si:dkey-93h22.8	70	83.333	Poecilia_formosa
ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	ENSPLAG00000001769	si:dkey-93h22.8	75	37.992	Poecilia_latipinna
ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	ENSPMEG00000014605	si:dkey-93h22.8	76	39.545	Poecilia_mexicana
ENSSDUG00000001268	si:dkey-93h22.8	91	82.278	ENSPREG00000000446	si:dkey-93h22.8	76	40.454	Poecilia_reticulata
ENSSDUG00000001268	si:dkey-93h22.8	99	61.329	ENSPNYG00000002682	-	99	61.026	Pundamilia_nyererei
ENSSDUG00000001268	si:dkey-93h22.8	55	63.924	ENSPNAG00000023094	si:dkey-93h22.8	55	63.924	Pygocentrus_nattereri
ENSSDUG00000001268	si:dkey-93h22.8	100	96.498	ENSSLDG00000012010	si:dkey-93h22.8	100	96.498	Seriola_lalandi_dorsalis
ENSSDUG00000001268	si:dkey-93h22.8	91	82.911	ENSXMAG00000000243	si:dkey-93h22.8	91	83.333	Xiphophorus_maculatus