EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001282 (Gene tree)
Gene ID: 111228175
Gene Symbol: -
Alias: -
Full Name: POP5 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2872 bases
Position: chrBDQW01000017.1:7894587-7897458
Accession: 111228175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001627	RNase_P_Rpp14	PF01900.19	2.7e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001684	-	1455	XM_022753982	ENSSDUP00000001627	167 (aa)	XP_022609703	UPI000BBF2B13

Gene Model

Click here to download ENSSDUG00000001282's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001282's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001282	-	85	55.634	ENSG00000167272	POP5	96	52.229	Homo_sapiens
ENSSDUG00000001282	-	90	79.333	ENSAPOG00000023686	POP5	100	77.844	Acanthochromis_polyacanthus
ENSSDUG00000001282	-	99	52.071	ENSAMEG00000008503	POP5	96	50.595	Ailuropoda_melanoleuca
ENSSDUG00000001282	-	93	85.806	ENSACIG00000018362	pop5	99	84.242	Amphilophus_citrinellus
ENSSDUG00000001282	-	93	81.290	ENSAOCG00000001930	pop5	100	80.240	Amphiprion_ocellaris
ENSSDUG00000001282	-	93	81.935	ENSAPEG00000006795	pop5	100	80.838	Amphiprion_percula
ENSSDUG00000001282	-	93	86.538	ENSATEG00000016792	pop5	100	85.629	Anabas_testudineus
ENSSDUG00000001282	-	57	62.105	ENSAPLG00000015761	POP5	97	58.095	Anas_platyrhynchos
ENSSDUG00000001282	-	95	49.367	ENSACAG00000003091	POP5	95	49.367	Anolis_carolinensis
ENSSDUG00000001282	-	85	57.343	ENSANAG00000023744	POP5	96	53.797	Aotus_nancymaae
ENSSDUG00000001282	-	90	86.093	ENSACLG00000021131	-	99	82.635	Astatotilapia_calliptera
ENSSDUG00000001282	-	89	63.758	ENSAMXG00000038175	pop5	97	58.084	Astyanax_mexicanus
ENSSDUG00000001282	-	99	54.491	ENSBTAG00000005385	POP5	98	54.491	Bos_taurus
ENSSDUG00000001282	-	85	56.338	ENSCJAG00000001309	POP5	98	52.096	Callithrix_jacchus
ENSSDUG00000001282	-	99	51.786	ENSCAFG00000010389	POP5	99	51.786	Canis_familiaris
ENSSDUG00000001282	-	99	51.786	ENSCAFG00020020663	POP5	99	51.786	Canis_lupus_dingo
ENSSDUG00000001282	-	99	52.695	ENSCHIG00000016402	POP5	98	52.695	Capra_hircus
ENSSDUG00000001282	-	85	54.930	ENSTSYG00000027616	POP5	96	52.071	Carlito_syrichta
ENSSDUG00000001282	-	65	50.459	ENSCAPG00000016873	POP5	95	50.459	Cavia_aperea
ENSSDUG00000001282	-	98	51.220	ENSCPOG00000012337	POP5	96	51.220	Cavia_porcellus
ENSSDUG00000001282	-	85	55.634	ENSCCAG00000023154	POP5	98	51.497	Cebus_capucinus
ENSSDUG00000001282	-	85	55.634	ENSCATG00000036825	POP5	96	52.229	Cercocebus_atys
ENSSDUG00000001282	-	99	51.807	ENSCLAG00000007808	POP5	98	51.807	Chinchilla_lanigera
ENSSDUG00000001282	-	85	55.634	ENSCSAG00000002246	POP5	96	52.229	Chlorocebus_sabaeus
ENSSDUG00000001282	-	87	43.836	ENSCHOG00000013969	POP5	96	43.293	Choloepus_hoffmanni
ENSSDUG00000001282	-	99	54.545	ENSCPBG00000011331	POP5	97	54.545	Chrysemys_picta_bellii
ENSSDUG00000001282	-	85	54.930	ENSCANG00000028001	POP5	98	50.898	Colobus_angolensis_palliatus
ENSSDUG00000001282	-	99	53.012	ENSCGRG00001017974	Pop5	98	53.012	Cricetulus_griseus_chok1gshd
ENSSDUG00000001282	-	99	53.012	ENSCGRG00000010102	Pop5	98	53.012	Cricetulus_griseus_crigri
ENSSDUG00000001282	-	81	80.147	ENSCSEG00000011103	pop5	99	70.303	Cynoglossus_semilaevis
ENSSDUG00000001282	-	88	78.912	ENSCSEG00000008332	-	99	74.545	Cynoglossus_semilaevis
ENSSDUG00000001282	-	99	52.071	ENSCVAG00000009152	-	99	52.071	Cyprinodon_variegatus
ENSSDUG00000001282	-	92	61.290	ENSDARG00000053452	pop5	99	59.524	Danio_rerio
ENSSDUG00000001282	-	85	55.944	ENSDNOG00000045952	-	92	53.659	Dasypus_novemcinctus
ENSSDUG00000001282	-	85	55.172	ENSDNOG00000012668	-	83	53.012	Dasypus_novemcinctus
ENSSDUG00000001282	-	99	50.000	ENSDORG00000029401	Pop5	99	52.695	Dipodomys_ordii
ENSSDUG00000001282	-	98	48.780	ENSETEG00000009283	POP5	96	48.780	Echinops_telfairi
ENSSDUG00000001282	-	98	39.634	ENSEBUG00000016369	pop5	100	39.634	Eptatretus_burgeri
ENSSDUG00000001282	-	85	55.634	ENSEASG00005004714	POP5	92	52.761	Equus_asinus_asinus
ENSSDUG00000001282	-	85	55.634	ENSECAG00000010012	POP5	92	52.761	Equus_caballus
ENSSDUG00000001282	-	98	69.512	ENSELUG00000023394	pop5	100	69.512	Esox_lucius
ENSSDUG00000001282	-	98	53.049	ENSFCAG00000042614	POP5	96	53.049	Felis_catus
ENSSDUG00000001282	-	92	57.792	ENSFALG00000007537	POP5	98	56.024	Ficedula_albicollis
ENSSDUG00000001282	-	85	54.225	ENSFDAG00000009972	POP5	94	51.899	Fukomys_damarensis
ENSSDUG00000001282	-	98	80.488	ENSFHEG00000022341	pop5	99	80.488	Fundulus_heteroclitus
ENSSDUG00000001282	-	78	74.809	ENSGMOG00000001073	pop5	99	74.809	Gadus_morhua
ENSSDUG00000001282	-	85	57.042	ENSGALG00000007124	POP5	56	54.037	Gallus_gallus
ENSSDUG00000001282	-	91	79.605	ENSGAFG00000005937	-	100	79.641	Gambusia_affinis
ENSSDUG00000001282	-	99	77.576	ENSGACG00000012710	-	100	77.576	Gasterosteus_aculeatus
ENSSDUG00000001282	-	99	54.545	ENSGAGG00000016005	POP5	97	54.545	Gopherus_agassizii
ENSSDUG00000001282	-	85	55.634	ENSGGOG00000013505	POP5	96	52.229	Gorilla_gorilla
ENSSDUG00000001282	-	90	87.417	ENSHBUG00000011718	-	99	83.832	Haplochromis_burtoni
ENSSDUG00000001282	-	98	52.439	ENSHGLG00000011786	POP5	96	52.439	Heterocephalus_glaber_female
ENSSDUG00000001282	-	98	52.439	ENSHGLG00100014284	POP5	96	52.439	Heterocephalus_glaber_male
ENSSDUG00000001282	-	90	76.667	ENSHCOG00000011809	pop5	99	73.939	Hippocampus_comes
ENSSDUG00000001282	-	89	64.430	ENSIPUG00000003437	pop5	99	61.446	Ictalurus_punctatus
ENSSDUG00000001282	-	99	51.497	ENSSTOG00000012577	POP5	99	51.497	Ictidomys_tridecemlineatus
ENSSDUG00000001282	-	85	61.538	ENSJJAG00000001080	Pop5	97	56.886	Jaculus_jaculus
ENSSDUG00000001282	-	90	84.667	ENSKMAG00000011158	-	97	83.030	Kryptolebias_marmoratus
ENSSDUG00000001282	-	95	79.747	ENSLBEG00000008652	pop5	91	78.443	Labrus_bergylta
ENSSDUG00000001282	-	99	51.190	ENSLACG00000018188	POP5	99	51.190	Latimeria_chalumnae
ENSSDUG00000001282	-	88	62.585	ENSLOCG00000002924	pop5	97	58.683	Lepisosteus_oculatus
ENSSDUG00000001282	-	98	50.602	ENSLAFG00000014545	POP5	96	50.602	Loxodonta_africana
ENSSDUG00000001282	-	85	55.634	ENSMFAG00000045933	POP5	98	52.597	Macaca_fascicularis
ENSSDUG00000001282	-	85	55.634	ENSMMUG00000040120	POP5	96	52.229	Macaca_mulatta
ENSSDUG00000001282	-	85	55.634	ENSMNEG00000041716	POP5	96	52.229	Macaca_nemestrina
ENSSDUG00000001282	-	85	56.338	ENSMLEG00000029377	POP5	96	52.866	Mandrillus_leucophaeus
ENSSDUG00000001282	-	93	83.226	ENSMAMG00000002108	pop5	100	82.635	Mastacembelus_armatus
ENSSDUG00000001282	-	90	86.755	ENSMZEG00005000069	-	99	83.234	Maylandia_zebra
ENSSDUG00000001282	-	99	53.293	ENSMAUG00000019670	Pop5	99	53.293	Mesocricetus_auratus
ENSSDUG00000001282	-	98	52.727	ENSMICG00000008692	POP5	92	52.147	Microcebus_murinus
ENSSDUG00000001282	-	99	52.096	ENSMOCG00000013322	Pop5	99	52.096	Microtus_ochrogaster
ENSSDUG00000001282	-	86	84.615	ENSMMOG00000010471	pop5	98	80.864	Mola_mola
ENSSDUG00000001282	-	99	54.217	ENSMODG00000003066	POP5	65	54.217	Monodelphis_domestica
ENSSDUG00000001282	-	92	84.967	ENSMALG00000017797	-	100	82.036	Monopterus_albus
ENSSDUG00000001282	-	99	52.695	MGP_CAROLIEiJ_G0027618	Pop5	99	52.695	Mus_caroli
ENSSDUG00000001282	-	99	52.695	ENSMUSG00000060152	Pop5	99	52.695	Mus_musculus
ENSSDUG00000001282	-	99	52.096	MGP_PahariEiJ_G0024198	Pop5	99	52.096	Mus_pahari
ENSSDUG00000001282	-	99	52.096	MGP_SPRETEiJ_G0028616	Pop5	99	52.096	Mus_spretus
ENSSDUG00000001282	-	85	54.930	ENSMPUG00000003221	POP5	96	50.920	Mustela_putorius_furo
ENSSDUG00000001282	-	85	56.944	ENSMLUG00000014657	POP5	98	53.529	Myotis_lucifugus
ENSSDUG00000001282	-	85	56.338	ENSNGAG00000002594	Pop5	98	51.786	Nannospalax_galili
ENSSDUG00000001282	-	83	73.188	ENSNBRG00000001020	-	100	73.188	Neolamprologus_brichardi
ENSSDUG00000001282	-	85	55.634	ENSNLEG00000015839	POP5	99	51.807	Nomascus_leucogenys
ENSSDUG00000001282	-	94	50.955	ENSMEUG00000015288	POP5	97	50.955	Notamacropus_eugenii
ENSSDUG00000001282	-	85	54.225	ENSOPRG00000004327	POP5	92	50.920	Ochotona_princeps
ENSSDUG00000001282	-	84	50.000	ENSODEG00000010351	-	88	50.000	Octodon_degus
ENSSDUG00000001282	-	85	54.225	ENSODEG00000006549	-	98	51.205	Octodon_degus
ENSSDUG00000001282	-	90	88.079	ENSONIG00000011172	pop5	99	83.832	Oreochromis_niloticus
ENSSDUG00000001282	-	57	56.842	ENSOANG00000001792	-	98	53.043	Ornithorhynchus_anatinus
ENSSDUG00000001282	-	85	54.930	ENSOCUG00000006537	POP5	96	51.220	Oryctolagus_cuniculus
ENSSDUG00000001282	-	100	74.405	ENSORLG00000014745	pop5	100	74.405	Oryzias_latipes
ENSSDUG00000001282	-	100	74.251	ENSORLG00020001168	pop5	100	74.251	Oryzias_latipes_hni
ENSSDUG00000001282	-	100	73.373	ENSORLG00015013535	pop5	100	73.373	Oryzias_latipes_hsok
ENSSDUG00000001282	-	100	77.844	ENSOMEG00000017643	pop5	100	77.844	Oryzias_melastigma
ENSSDUG00000001282	-	88	54.730	ENSOGAG00000008528	POP5	90	54.730	Otolemur_garnettii
ENSSDUG00000001282	-	99	52.071	ENSOARG00000012764	POP5	98	52.071	Ovis_aries
ENSSDUG00000001282	-	85	55.634	ENSPPAG00000043719	POP5	96	52.229	Pan_paniscus
ENSSDUG00000001282	-	98	53.049	ENSPPRG00000006474	POP5	96	53.049	Panthera_pardus
ENSSDUG00000001282	-	98	53.049	ENSPTIG00000012194	POP5	96	53.049	Panthera_tigris_altaica
ENSSDUG00000001282	-	85	55.634	ENSPTRG00000005543	POP5	96	52.229	Pan_troglodytes
ENSSDUG00000001282	-	85	55.634	ENSPANG00000014166	POP5	96	52.229	Papio_anubis
ENSSDUG00000001282	-	88	69.388	ENSPKIG00000025154	pop5	98	64.417	Paramormyrops_kingsleyae
ENSSDUG00000001282	-	66	57.273	ENSPSIG00000013154	POP5	86	57.273	Pelodiscus_sinensis
ENSSDUG00000001282	-	99	75.152	ENSPMGG00000000812	-	100	75.152	Periophthalmus_magnuspinnatus
ENSSDUG00000001282	-	99	52.096	ENSPEMG00000017493	Pop5	99	52.096	Peromyscus_maniculatus_bairdii
ENSSDUG00000001282	-	92	78.065	ENSPFOG00000013000	pop5	100	77.381	Poecilia_formosa
ENSSDUG00000001282	-	92	79.221	ENSPLAG00000014070	pop5	100	78.443	Poecilia_latipinna
ENSSDUG00000001282	-	91	79.605	ENSPMEG00000012863	POP5	100	79.641	Poecilia_mexicana
ENSSDUG00000001282	-	91	79.605	ENSPMEG00000024039	pop5	100	79.641	Poecilia_mexicana
ENSSDUG00000001282	-	92	82.468	ENSPREG00000020151	pop5	100	82.036	Poecilia_reticulata
ENSSDUG00000001282	-	85	56.338	ENSPPYG00000005036	POP5	83	51.807	Pongo_abelii
ENSSDUG00000001282	-	62	55.769	ENSPCAG00000004788	POP5	100	55.769	Procavia_capensis
ENSSDUG00000001282	-	85	54.930	ENSPCOG00000017618	POP5	92	52.147	Propithecus_coquereli
ENSSDUG00000001282	-	85	56.338	ENSPVAG00000002233	POP5	92	52.761	Pteropus_vampyrus
ENSSDUG00000001282	-	90	87.417	ENSPNYG00000002679	pop5	99	83.832	Pundamilia_nyererei
ENSSDUG00000001282	-	87	63.014	ENSPNAG00000012662	pop5	94	58.683	Pygocentrus_nattereri
ENSSDUG00000001282	-	94	52.532	ENSRNOG00000001199	Pop5	99	51.497	Rattus_norvegicus
ENSSDUG00000001282	-	85	54.930	ENSRBIG00000043505	POP5	98	51.948	Rhinopithecus_bieti
ENSSDUG00000001282	-	85	54.930	ENSRROG00000045063	POP5	98	51.948	Rhinopithecus_roxellana
ENSSDUG00000001282	-	85	55.634	ENSSBOG00000032691	POP5	100	57.353	Saimiri_boliviensis_boliviensis
ENSSDUG00000001282	-	91	69.079	ENSSFOG00015005630	pop5	98	66.667	Scleropages_formosus
ENSSDUG00000001282	-	93	84.713	ENSSMAG00000018868	pop5	100	84.024	Scophthalmus_maximus
ENSSDUG00000001282	-	100	97.605	ENSSLDG00000017031	pop5	100	97.605	Seriola_lalandi_dorsalis
ENSSDUG00000001282	-	100	97.605	ENSSLDG00000003801	-	100	97.605	Seriola_lalandi_dorsalis
ENSSDUG00000001282	-	62	57.692	ENSSARG00000005564	POP5	64	57.692	Sorex_araneus
ENSSDUG00000001282	-	88	56.463	ENSSPUG00000015531	POP5	99	52.410	Sphenodon_punctatus
ENSSDUG00000001282	-	88	85.714	ENSSPAG00000015306	pop5	100	81.437	Stegastes_partitus
ENSSDUG00000001282	-	99	51.497	ENSSSCG00000009912	POP5	98	51.497	Sus_scrofa
ENSSDUG00000001282	-	99	54.217	ENSTGUG00000009602	POP5	99	54.217	Taeniopygia_guttata
ENSSDUG00000001282	-	98	78.528	ENSTRUG00000016214	pop5	98	78.528	Takifugu_rubripes
ENSSDUG00000001282	-	85	80.986	ENSTNIG00000011465	pop5	85	80.986	Tetraodon_nigroviridis
ENSSDUG00000001282	-	85	54.930	ENSTBEG00000010131	POP5	97	50.000	Tupaia_belangeri
ENSSDUG00000001282	-	99	52.381	ENSTTRG00000000153	POP5	99	52.381	Tursiops_truncatus
ENSSDUG00000001282	-	98	49.390	ENSUAMG00000015541	POP5	75	49.390	Ursus_americanus
ENSSDUG00000001282	-	99	50.602	ENSUMAG00000006137	POP5	96	50.602	Ursus_maritimus
ENSSDUG00000001282	-	99	53.571	ENSVPAG00000010365	POP5	98	53.571	Vicugna_pacos
ENSSDUG00000001282	-	99	51.786	ENSVVUG00000021154	POP5	99	51.786	Vulpes_vulpes
ENSSDUG00000001282	-	58	60.825	ENSXETG00000031793	POP5	85	60.825	Xenopus_tropicalis
ENSSDUG00000001282	-	89	81.081	ENSXMAG00000003508	-	87	79.042	Xiphophorus_maculatus