EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001321 (Gene tree)
Gene ID: 111225958
Gene Symbol: exd2
Alias: fi72h12|wu:fi72h12|zgc:175195
Full Name: exonuclease 3'-5' domain containing 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 12496 bases
Position: chrBDQW01000149.1:132004-144499
Accession: 111225958
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001698	DNA_pol_A_exo1	PF01612.20	3.1e-16	1	1
ENSSDUP00000001737	DNA_pol_A_exo1	PF01612.20	3.5e-16	1	1
ENSSDUP00000001725	DNA_pol_A_exo1	PF01612.20	1.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001785	-	1809	-	ENSSDUP00000001725	602 (aa)	-	-
ENSSDUT00000001798	-	2166	XM_022751022	ENSSDUP00000001737	625 (aa)	XP_022606743	-
ENSSDUT00000001758	-	7016	XM_022751024	ENSSDUP00000001698	582 (aa)	XP_022606745	-

Gene Model

Click here to download ENSSDUG00000001321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001321	exd2	100	58.373	ENSG00000081177	EXD2	100	62.550	Homo_sapiens
ENSSDUG00000001321	exd2	100	87.220	ENSAPOG00000004053	exd2	97	87.220	Acanthochromis_polyacanthus
ENSSDUG00000001321	exd2	99	56.250	ENSAMEG00000014467	EXD2	99	57.143	Ailuropoda_melanoleuca
ENSSDUG00000001321	exd2	100	82.720	ENSACIG00000012036	exd2	100	81.629	Amphilophus_citrinellus
ENSSDUG00000001321	exd2	100	89.440	ENSAOCG00000008005	exd2	97	89.440	Amphiprion_ocellaris
ENSSDUG00000001321	exd2	100	88.480	ENSAPEG00000006784	exd2	97	88.800	Amphiprion_percula
ENSSDUG00000001321	exd2	100	88.160	ENSATEG00000019834	exd2	100	85.512	Anabas_testudineus
ENSSDUG00000001321	exd2	88	62.687	ENSAPLG00000003322	EXD2	99	62.500	Anas_platyrhynchos
ENSSDUG00000001321	exd2	99	58.400	ENSACAG00000005306	EXD2	99	58.400	Anolis_carolinensis
ENSSDUG00000001321	exd2	100	57.735	ENSANAG00000024026	EXD2	100	57.735	Aotus_nancymaae
ENSSDUG00000001321	exd2	100	81.440	ENSACLG00000000445	exd2	100	79.749	Astatotilapia_calliptera
ENSSDUG00000001321	exd2	100	69.085	ENSAMXG00000043700	exd2	100	68.567	Astyanax_mexicanus
ENSSDUG00000001321	exd2	99	55.981	ENSBTAG00000010052	EXD2	99	56.230	Bos_taurus
ENSSDUG00000001321	exd2	100	58.054	ENSCJAG00000014987	EXD2	100	58.054	Callithrix_jacchus
ENSSDUG00000001321	exd2	99	57.120	ENSCAFG00000016557	EXD2	99	57.532	Canis_familiaris
ENSSDUG00000001321	exd2	99	57.120	ENSCAFG00020005886	EXD2	99	57.532	Canis_lupus_dingo
ENSSDUG00000001321	exd2	99	56.039	ENSCHIG00000021919	EXD2	99	56.290	Capra_hircus
ENSSDUG00000001321	exd2	100	56.619	ENSTSYG00000002206	EXD2	100	56.550	Carlito_syrichta
ENSSDUG00000001321	exd2	100	57.280	ENSCAPG00000011298	EXD2	100	57.440	Cavia_aperea
ENSSDUG00000001321	exd2	100	57.120	ENSCPOG00000010018	EXD2	100	57.280	Cavia_porcellus
ENSSDUG00000001321	exd2	100	57.416	ENSCCAG00000032107	EXD2	100	57.416	Cebus_capucinus
ENSSDUG00000001321	exd2	100	58.373	ENSCATG00000030404	EXD2	100	58.147	Cercocebus_atys
ENSSDUG00000001321	exd2	98	58.604	ENSCLAG00000005648	EXD2	99	58.604	Chinchilla_lanigera
ENSSDUG00000001321	exd2	100	57.188	ENSCSAG00000013084	EXD2	100	57.188	Chlorocebus_sabaeus
ENSSDUG00000001321	exd2	100	59.812	ENSCPBG00000021585	EXD2	100	59.591	Chrysemys_picta_bellii
ENSSDUG00000001321	exd2	92	41.682	ENSCING00000016481	-	92	41.324	Ciona_intestinalis
ENSSDUG00000001321	exd2	100	57.895	ENSCANG00000036359	EXD2	100	57.895	Colobus_angolensis_palliatus
ENSSDUG00000001321	exd2	100	52.790	ENSCGRG00001022081	Exd2	100	53.111	Cricetulus_griseus_chok1gshd
ENSSDUG00000001321	exd2	91	59.643	ENSCGRG00000010700	Exd2	90	58.191	Cricetulus_griseus_crigri
ENSSDUG00000001321	exd2	99	80.251	ENSCSEG00000009761	exd2	97	76.689	Cynoglossus_semilaevis
ENSSDUG00000001321	exd2	100	83.520	ENSCVAG00000016150	exd2	93	83.520	Cyprinodon_variegatus
ENSSDUG00000001321	exd2	100	69.157	ENSDARG00000016117	exd2	100	69.157	Danio_rerio
ENSSDUG00000001321	exd2	99	56.480	ENSDNOG00000046970	EXD2	99	56.480	Dasypus_novemcinctus
ENSSDUG00000001321	exd2	100	56.270	ENSDORG00000015087	Exd2	100	56.829	Dipodomys_ordii
ENSSDUG00000001321	exd2	95	37.133	FBgn0037901	CG6744	93	37.031	Drosophila_melanogaster
ENSSDUG00000001321	exd2	82	60.636	ENSETEG00000013803	EXD2	100	60.757	Echinops_telfairi
ENSSDUG00000001321	exd2	98	41.060	ENSEBUG00000013264	exd2	99	42.051	Eptatretus_burgeri
ENSSDUG00000001321	exd2	99	56.361	ENSEASG00005016586	EXD2	99	57.097	Equus_asinus_asinus
ENSSDUG00000001321	exd2	99	53.994	ENSECAG00000019103	EXD2	84	56.444	Equus_caballus
ENSSDUG00000001321	exd2	82	61.630	ENSEEUG00000007011	EXD2	100	62.151	Erinaceus_europaeus
ENSSDUG00000001321	exd2	99	74.920	ENSELUG00000022318	exd2	99	75.879	Esox_lucius
ENSSDUG00000001321	exd2	99	56.571	ENSFCAG00000014350	EXD2	99	56.982	Felis_catus
ENSSDUG00000001321	exd2	100	57.234	ENSFALG00000005050	EXD2	100	56.938	Ficedula_albicollis
ENSSDUG00000001321	exd2	100	57.692	ENSFDAG00000009719	EXD2	100	57.692	Fukomys_damarensis
ENSSDUG00000001321	exd2	100	82.080	ENSFHEG00000010499	exd2	100	80.312	Fundulus_heteroclitus
ENSSDUG00000001321	exd2	75	62.528	ENSGMOG00000005937	exd2	99	62.749	Gadus_morhua
ENSSDUG00000001321	exd2	92	61.989	ENSGALG00000009456	EXD2	100	57.257	Gallus_gallus
ENSSDUG00000001321	exd2	100	79.680	ENSGAFG00000017943	exd2	100	77.519	Gambusia_affinis
ENSSDUG00000001321	exd2	84	87.795	ENSGACG00000005358	exd2	99	87.795	Gasterosteus_aculeatus
ENSSDUG00000001321	exd2	100	59.429	ENSGAGG00000023895	EXD2	100	58.889	Gopherus_agassizii
ENSSDUG00000001321	exd2	100	58.214	ENSGGOG00000001258	EXD2	100	58.214	Gorilla_gorilla
ENSSDUG00000001321	exd2	100	81.120	ENSHBUG00000019366	exd2	100	80.063	Haplochromis_burtoni
ENSSDUG00000001321	exd2	100	56.378	ENSHGLG00000008157	EXD2	100	56.693	Heterocephalus_glaber_female
ENSSDUG00000001321	exd2	100	56.556	ENSHGLG00100003936	EXD2	100	56.872	Heterocephalus_glaber_male
ENSSDUG00000001321	exd2	100	72.170	ENSHCOG00000018905	exd2	100	71.698	Hippocampus_comes
ENSSDUG00000001321	exd2	100	69.206	ENSIPUG00000000560	exd2	100	68.652	Ictalurus_punctatus
ENSSDUG00000001321	exd2	100	55.730	ENSSTOG00000000175	EXD2	100	55.887	Ictidomys_tridecemlineatus
ENSSDUG00000001321	exd2	77	49.134	ENSJJAG00000021417	-	100	51.481	Jaculus_jaculus
ENSSDUG00000001321	exd2	100	84.320	ENSKMAG00000016785	exd2	100	82.031	Kryptolebias_marmoratus
ENSSDUG00000001321	exd2	100	86.146	ENSLBEG00000028400	exd2	97	86.783	Labrus_bergylta
ENSSDUG00000001321	exd2	100	55.183	ENSLACG00000018609	EXD2	100	55.112	Latimeria_chalumnae
ENSSDUG00000001321	exd2	100	66.560	ENSLOCG00000013376	exd2	100	67.042	Lepisosteus_oculatus
ENSSDUG00000001321	exd2	100	57.827	ENSLAFG00000018508	EXD2	100	62.016	Loxodonta_africana
ENSSDUG00000001321	exd2	100	57.895	ENSMFAG00000041413	EXD2	100	57.668	Macaca_fascicularis
ENSSDUG00000001321	exd2	100	58.054	ENSMMUG00000020514	EXD2	100	57.827	Macaca_mulatta
ENSSDUG00000001321	exd2	100	58.054	ENSMNEG00000038561	EXD2	100	57.827	Macaca_nemestrina
ENSSDUG00000001321	exd2	100	58.214	ENSMLEG00000044130	EXD2	100	58.214	Mandrillus_leucophaeus
ENSSDUG00000001321	exd2	100	88.320	ENSMAMG00000000136	exd2	97	88.320	Mastacembelus_armatus
ENSSDUG00000001321	exd2	100	81.440	ENSMZEG00005011274	exd2	100	79.283	Maylandia_zebra
ENSSDUG00000001321	exd2	91	62.230	ENSMGAG00000011874	EXD2	99	57.929	Meleagris_gallopavo
ENSSDUG00000001321	exd2	100	50.394	ENSMICG00000009606	EXD2	100	50.629	Microcebus_murinus
ENSSDUG00000001321	exd2	100	53.655	ENSMOCG00000019497	Exd2	100	53.738	Microtus_ochrogaster
ENSSDUG00000001321	exd2	100	86.864	ENSMMOG00000000384	exd2	100	86.864	Mola_mola
ENSSDUG00000001321	exd2	99	50.706	ENSMODG00000010228	EXD2	99	52.709	Monodelphis_domestica
ENSSDUG00000001321	exd2	100	86.720	ENSMALG00000022371	exd2	97	86.720	Monopterus_albus
ENSSDUG00000001321	exd2	100	53.425	ENSMUSG00000032705	Exd2	100	53.506	Mus_musculus
ENSSDUG00000001321	exd2	100	53.727	MGP_PahariEiJ_G0029652	Exd2	100	53.655	Mus_pahari
ENSSDUG00000001321	exd2	100	53.681	MGP_SPRETEiJ_G0018741	Exd2	100	53.610	Mus_spretus
ENSSDUG00000001321	exd2	99	56.410	ENSMPUG00000007368	EXD2	99	56.501	Mustela_putorius_furo
ENSSDUG00000001321	exd2	84	60.853	ENSMLUG00000011848	EXD2	100	60.853	Myotis_lucifugus
ENSSDUG00000001321	exd2	100	82.927	ENSNBRG00000004615	exd2	100	82.764	Neolamprologus_brichardi
ENSSDUG00000001321	exd2	100	58.214	ENSNLEG00000001275	EXD2	100	58.214	Nomascus_leucogenys
ENSSDUG00000001321	exd2	82	62.028	ENSOPRG00000000078	EXD2	100	62.351	Ochotona_princeps
ENSSDUG00000001321	exd2	100	56.850	ENSODEG00000014245	EXD2	100	57.668	Octodon_degus
ENSSDUG00000001321	exd2	100	81.760	ENSONIG00000000385	exd2	100	79.439	Oreochromis_niloticus
ENSSDUG00000001321	exd2	84	53.295	ENSOANG00000012621	EXD2	100	52.591	Ornithorhynchus_anatinus
ENSSDUG00000001321	exd2	100	54.758	ENSOCUG00000006626	EXD2	100	55.760	Oryctolagus_cuniculus
ENSSDUG00000001321	exd2	100	75.879	ENSORLG00000019790	exd2	100	75.118	Oryzias_latipes
ENSSDUG00000001321	exd2	100	75.559	ENSORLG00020004434	exd2	100	75.118	Oryzias_latipes_hni
ENSSDUG00000001321	exd2	100	75.879	ENSORLG00015001003	exd2	100	75.118	Oryzias_latipes_hsok
ENSSDUG00000001321	exd2	100	75.079	ENSOMEG00000023552	exd2	100	75.079	Oryzias_melastigma
ENSSDUG00000001321	exd2	100	56.418	ENSOGAG00000012059	EXD2	99	56.508	Otolemur_garnettii
ENSSDUG00000001321	exd2	99	56.039	ENSOARG00000021181	EXD2	99	56.290	Ovis_aries
ENSSDUG00000001321	exd2	100	58.214	ENSPPAG00000042293	EXD2	100	58.214	Pan_paniscus
ENSSDUG00000001321	exd2	99	56.410	ENSPPRG00000002946	EXD2	99	56.822	Panthera_pardus
ENSSDUG00000001321	exd2	99	56.410	ENSPTIG00000018876	EXD2	99	56.822	Panthera_tigris_altaica
ENSSDUG00000001321	exd2	100	58.214	ENSPTRG00000006480	EXD2	100	62.351	Pan_troglodytes
ENSSDUG00000001321	exd2	100	58.214	ENSPANG00000025013	EXD2	100	58.214	Papio_anubis
ENSSDUG00000001321	exd2	99	69.731	ENSPKIG00000007907	exd2	99	70.560	Paramormyrops_kingsleyae
ENSSDUG00000001321	exd2	100	55.151	ENSPSIG00000010111	EXD2	100	55.134	Pelodiscus_sinensis
ENSSDUG00000001321	exd2	100	78.309	ENSPMGG00000021023	exd2	100	78.150	Periophthalmus_magnuspinnatus
ENSSDUG00000001321	exd2	51	56.536	ENSPCIG00000012390	-	100	56.678	Phascolarctos_cinereus
ENSSDUG00000001321	exd2	100	78.720	ENSPFOG00000004789	exd2	100	78.720	Poecilia_formosa
ENSSDUG00000001321	exd2	100	78.880	ENSPLAG00000020798	exd2	100	77.812	Poecilia_latipinna
ENSSDUG00000001321	exd2	100	79.360	ENSPMEG00000006063	exd2	100	77.054	Poecilia_mexicana
ENSSDUG00000001321	exd2	100	80.583	ENSPREG00000008479	exd2	100	80.583	Poecilia_reticulata
ENSSDUG00000001321	exd2	100	58.054	ENSPPYG00000005937	EXD2	100	58.054	Pongo_abelii
ENSSDUG00000001321	exd2	82	61.829	ENSPCAG00000007242	EXD2	100	61.952	Procavia_capensis
ENSSDUG00000001321	exd2	99	58.080	ENSPCOG00000028702	EXD2	99	57.853	Propithecus_coquereli
ENSSDUG00000001321	exd2	82	61.554	ENSPVAG00000016901	EXD2	100	61.554	Pteropus_vampyrus
ENSSDUG00000001321	exd2	100	81.440	ENSPNYG00000010343	exd2	100	80.377	Pundamilia_nyererei
ENSSDUG00000001321	exd2	100	68.553	ENSPNAG00000009476	exd2	100	69.340	Pygocentrus_nattereri
ENSSDUG00000001321	exd2	91	59.964	ENSRNOG00000027707	Exd2	100	53.976	Rattus_norvegicus
ENSSDUG00000001321	exd2	100	57.735	ENSRBIG00000031108	EXD2	100	58.054	Rhinopithecus_bieti
ENSSDUG00000001321	exd2	100	57.735	ENSRROG00000033249	EXD2	100	58.054	Rhinopithecus_roxellana
ENSSDUG00000001321	exd2	100	57.416	ENSSBOG00000035171	EXD2	100	57.416	Saimiri_boliviensis_boliviensis
ENSSDUG00000001321	exd2	99	54.281	ENSSHAG00000005008	EXD2	99	54.281	Sarcophilus_harrisii
ENSSDUG00000001321	exd2	100	70.156	ENSSFOG00015006470	exd2	100	71.094	Scleropages_formosus
ENSSDUG00000001321	exd2	100	79.251	ENSSMAG00000009321	exd2	100	78.241	Scophthalmus_maximus
ENSSDUG00000001321	exd2	100	98.720	ENSSLDG00000011348	exd2	97	98.720	Seriola_lalandi_dorsalis
ENSSDUG00000001321	exd2	71	62.500	ENSSARG00000012747	EXD2	84	59.483	Sorex_araneus
ENSSDUG00000001321	exd2	84	63.619	ENSSPUG00000002120	EXD2	100	63.424	Sphenodon_punctatus
ENSSDUG00000001321	exd2	100	89.137	ENSSPAG00000002512	exd2	97	89.776	Stegastes_partitus
ENSSDUG00000001321	exd2	99	57.303	ENSSSCG00000002305	EXD2	95	61.434	Sus_scrofa
ENSSDUG00000001321	exd2	100	58.095	ENSTGUG00000011469	EXD2	100	58.095	Taeniopygia_guttata
ENSSDUG00000001321	exd2	99	79.032	ENSTRUG00000003672	exd2	99	79.032	Takifugu_rubripes
ENSSDUG00000001321	exd2	91	80.762	ENSTNIG00000003046	exd2	100	81.703	Tetraodon_nigroviridis
ENSSDUG00000001321	exd2	82	61.431	ENSTTRG00000013954	EXD2	100	61.554	Tursiops_truncatus
ENSSDUG00000001321	exd2	99	55.911	ENSUAMG00000010774	EXD2	99	56.480	Ursus_americanus
ENSSDUG00000001321	exd2	99	56.000	ENSUMAG00000010083	EXD2	99	56.571	Ursus_maritimus
ENSSDUG00000001321	exd2	70	62.617	ENSVPAG00000005658	EXD2	99	63.232	Vicugna_pacos
ENSSDUG00000001321	exd2	99	57.120	ENSVVUG00000003704	EXD2	99	57.372	Vulpes_vulpes
ENSSDUG00000001321	exd2	99	57.325	ENSXETG00000017930	exd2	99	57.393	Xenopus_tropicalis
ENSSDUG00000001321	exd2	65	84.043	ENSXCOG00000014338	exd2	63	84.043	Xiphophorus_couchianus
ENSSDUG00000001321	exd2	100	79.360	ENSXMAG00000003565	exd2	100	78.281	Xiphophorus_maculatus