EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001398 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 23783 bases
Position: chrBDQW01006988.1:94067-117849
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001764	MMR_HSR1	PF01926.23	1.2e-10	1	1
ENSSDUP00000001770	MMR_HSR1	PF01926.23	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001831	-	3234	-	ENSSDUP00000001770	602 (aa)	-	-
ENSSDUT00000001824	-	3672	-	ENSSDUP00000001764	602 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000001398's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001398's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001398	-	73	53.273	ENSATEG00000010935	-	83	47.565	Anabas_testudineus
ENSSDUG00000001398	-	74	52.850	ENSATEG00000010951	-	94	49.119	Anabas_testudineus
ENSSDUG00000001398	-	61	35.484	ENSDARG00000087012	BX004816.2	78	33.333	Danio_rerio
ENSSDUG00000001398	-	52	35.277	ENSDARG00000060049	zgc:195075	58	39.271	Danio_rerio
ENSSDUG00000001398	-	50	34.494	ENSFHEG00000013922	-	56	39.437	Fundulus_heteroclitus
ENSSDUG00000001398	-	73	38.877	ENSGAFG00000006126	-	81	38.008	Gambusia_affinis
ENSSDUG00000001398	-	54	51.064	ENSKMAG00000014089	-	70	53.979	Kryptolebias_marmoratus
ENSSDUG00000001398	-	66	49.873	ENSKMAG00000014074	-	68	49.873	Kryptolebias_marmoratus
ENSSDUG00000001398	-	82	49.027	ENSMAMG00000013278	-	93	47.826	Mastacembelus_armatus
ENSSDUG00000001398	-	75	41.153	ENSMZEG00005020552	-	55	55.914	Maylandia_zebra
ENSSDUG00000001398	-	51	34.591	ENSNBRG00000023111	-	69	39.720	Neolamprologus_brichardi
ENSSDUG00000001398	-	52	32.710	ENSONIG00000014258	-	63	38.028	Oreochromis_niloticus
ENSSDUG00000001398	-	54	44.785	ENSPFOG00000003348	-	68	53.589	Poecilia_formosa
ENSSDUG00000001398	-	88	39.414	ENSPMEG00000008997	-	57	41.235	Poecilia_mexicana
ENSSDUG00000001398	-	95	33.635	ENSPREG00000008177	-	58	40.648	Poecilia_reticulata
ENSSDUG00000001398	-	50	33.654	ENSPNAG00000008992	-	80	33.550	Pygocentrus_nattereri
ENSSDUG00000001398	-	50	31.373	ENSSPAG00000020154	-	79	33.221	Stegastes_partitus
ENSSDUG00000001398	-	50	61.353	ENSSPAG00000015913	-	92	61.353	Stegastes_partitus
ENSSDUG00000001398	-	92	36.230	ENSXMAG00000024901	-	90	37.349	Xiphophorus_maculatus