EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000001413 (Gene tree)
Gene ID: 111236576
Gene Symbol: dhx38
Alias: zgc:63517
Full Name: DEAH-box helicase 38
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 32467 bases
Position: chrBDQW01000674.1:1523676-1556142
Accession: 111236576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002028	DEAD	PF00270.29	1.5e-06	1	1
ENSSDUP00000001951	DEAD	PF00270.29	1.6e-06	1	1
ENSSDUP00000001915	DEAD	PF00270.29	1.7e-06	1	1
ENSSDUP00000001951	HA2	PF04408.23	8e-20	1	1
ENSSDUP00000002028	HA2	PF04408.23	8e-20	1	1
ENSSDUP00000001915	HA2	PF04408.23	8.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001977	-	4183	-	ENSSDUP00000001915	1264 (aa)	-	-
ENSSDUT00000002091	-	3696	XM_022765365	ENSSDUP00000002028	1231 (aa)	XP_022621086	-
ENSSDUT00000002014	-	4164	-	ENSSDUP00000001951	1231 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000001413's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001413's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000001413	dhx38	55	39.804	ENSSDUG00000012511	dhx40	91	40.795
ENSSDUG00000001413	dhx38	51	44.168	ENSSDUG00000017798	dhx33	94	44.168
ENSSDUG00000001413	dhx38	66	47.195	ENSSDUG00000010822	dhx8	68	47.239
ENSSDUG00000001413	dhx38	51	53.858	ENSSDUG00000006948	dhx16	60	53.858
ENSSDUG00000001413	dhx38	52	45.015	ENSSDUG00000007372	dhx15	83	45.356
ENSSDUG00000001413	dhx38	66	46.973	ENSSDUG00000010774	dhx8	70	46.723
ENSSDUG00000001413	dhx38	52	44.394	ENSSDUG00000016954	zgc:158828	94	44.394
ENSSDUG00000001413	dhx38	53	44.745	ENSSDUG00000002650	DHX15	86	45.181
ENSSDUG00000001413	dhx38	50	38.288	ENSSDUG00000009022	dhx57	51	36.620
ENSSDUG00000001413	dhx38	53	40.000	ENSSDUG00000002265	dhx37	62	40.000
ENSSDUG00000001413	dhx38	51	30.462	ENSSDUG00000017808	dhx32a	89	30.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001413	dhx38	99	81.260	ENSG00000140829	DHX38	99	86.842	Homo_sapiens
ENSSDUG00000001413	dhx38	100	94.805	ENSAPOG00000010788	dhx38	100	93.785	Acanthochromis_polyacanthus
ENSSDUG00000001413	dhx38	99	81.855	ENSAMEG00000002227	DHX38	99	82.016	Ailuropoda_melanoleuca
ENSSDUG00000001413	dhx38	100	94.643	ENSACIG00000000573	dhx38	100	93.675	Amphilophus_citrinellus
ENSSDUG00000001413	dhx38	100	95.250	ENSAOCG00000007610	dhx38	100	95.250	Amphiprion_ocellaris
ENSSDUG00000001413	dhx38	83	94.526	ENSAOCG00000013483	-	98	95.015	Amphiprion_ocellaris
ENSSDUG00000001413	dhx38	100	95.057	ENSAPEG00000011410	dhx38	98	95.705	Amphiprion_percula
ENSSDUG00000001413	dhx38	100	93.593	ENSATEG00000004692	dhx38	100	92.436	Anabas_testudineus
ENSSDUG00000001413	dhx38	91	82.482	ENSAPLG00000015279	DHX38	100	82.835	Anas_platyrhynchos
ENSSDUG00000001413	dhx38	99	73.370	ENSACAG00000008115	DHX38	99	73.328	Anolis_carolinensis
ENSSDUG00000001413	dhx38	99	81.260	ENSANAG00000022259	DHX38	99	82.310	Aotus_nancymaae
ENSSDUG00000001413	dhx38	100	92.539	ENSACLG00000001837	dhx38	99	92.539	Astatotilapia_calliptera
ENSSDUG00000001413	dhx38	98	89.191	ENSAMXG00000004396	dhx38	97	89.191	Astyanax_mexicanus
ENSSDUG00000001413	dhx38	99	82.149	ENSBTAG00000013265	DHX38	99	82.229	Bos_taurus
ENSSDUG00000001413	dhx38	90	57.885	WBGene00003389	mog-1	95	58.596	Caenorhabditis_elegans
ENSSDUG00000001413	dhx38	99	81.341	ENSCJAG00000015103	DHX38	99	82.391	Callithrix_jacchus
ENSSDUG00000001413	dhx38	99	82.149	ENSCAFG00000020228	DHX38	99	82.472	Canis_familiaris
ENSSDUG00000001413	dhx38	99	81.598	ENSCAFG00020020392	DHX38	99	81.921	Canis_lupus_dingo
ENSSDUG00000001413	dhx38	99	82.149	ENSCHIG00000027105	DHX38	99	82.149	Capra_hircus
ENSSDUG00000001413	dhx38	99	82.324	ENSTSYG00000012023	DHX38	99	82.567	Carlito_syrichta
ENSSDUG00000001413	dhx38	99	81.235	ENSCAPG00000016032	DHX38	99	81.476	Cavia_aperea
ENSSDUG00000001413	dhx38	99	82.068	ENSCPOG00000013965	DHX38	99	82.310	Cavia_porcellus
ENSSDUG00000001413	dhx38	99	81.260	ENSCCAG00000031157	DHX38	99	82.310	Cebus_capucinus
ENSSDUG00000001413	dhx38	99	75.261	ENSCATG00000036889	DHX38	99	76.305	Cercocebus_atys
ENSSDUG00000001413	dhx38	99	81.826	ENSCLAG00000008250	DHX38	99	82.068	Chinchilla_lanigera
ENSSDUG00000001413	dhx38	99	81.341	ENSCSAG00000004218	DHX38	99	82.310	Chlorocebus_sabaeus
ENSSDUG00000001413	dhx38	55	85.503	ENSCHOG00000009444	-	100	85.503	Choloepus_hoffmanni
ENSSDUG00000001413	dhx38	99	81.075	ENSCPBG00000027010	DHX38	99	81.010	Chrysemys_picta_bellii
ENSSDUG00000001413	dhx38	99	62.560	ENSCING00000003597	-	98	63.711	Ciona_intestinalis
ENSSDUG00000001413	dhx38	99	63.593	ENSCSAVG00000001117	-	100	80.349	Ciona_savignyi
ENSSDUG00000001413	dhx38	99	80.937	ENSCANG00000039299	DHX38	99	82.097	Colobus_angolensis_palliatus
ENSSDUG00000001413	dhx38	99	81.987	ENSCGRG00001021542	Dhx38	99	82.229	Cricetulus_griseus_chok1gshd
ENSSDUG00000001413	dhx38	99	81.987	ENSCGRG00000017386	Dhx38	99	82.229	Cricetulus_griseus_crigri
ENSSDUG00000001413	dhx38	100	93.014	ENSCSEG00000008437	dhx38	100	90.931	Cynoglossus_semilaevis
ENSSDUG00000001413	dhx38	99	93.415	ENSCVAG00000023150	dhx38	98	93.415	Cyprinodon_variegatus
ENSSDUG00000001413	dhx38	100	87.248	ENSDARG00000100013	dhx38	100	87.431	Danio_rerio
ENSSDUG00000001413	dhx38	99	81.745	ENSDNOG00000006717	DHX38	99	81.906	Dasypus_novemcinctus
ENSSDUG00000001413	dhx38	99	82.310	ENSDORG00000005226	Dhx38	99	82.310	Dipodomys_ordii
ENSSDUG00000001413	dhx38	99	60.016	FBgn0026713	l(1)G0007	100	72.407	Drosophila_melanogaster
ENSSDUG00000001413	dhx38	61	92.727	ENSETEG00000014663	-	67	92.727	Echinops_telfairi
ENSSDUG00000001413	dhx38	99	71.612	ENSEBUG00000005875	dhx38	99	71.348	Eptatretus_burgeri
ENSSDUG00000001413	dhx38	100	81.694	ENSEASG00005013249	DHX38	99	81.946	Equus_asinus_asinus
ENSSDUG00000001413	dhx38	100	81.774	ENSECAG00000000526	DHX38	99	81.935	Equus_caballus
ENSSDUG00000001413	dhx38	100	83.913	ENSELUG00000014379	dhx38	100	84.262	Esox_lucius
ENSSDUG00000001413	dhx38	99	82.149	ENSFCAG00000005831	DHX38	99	82.229	Felis_catus
ENSSDUG00000001413	dhx38	99	78.011	ENSFALG00000002671	DHX38	99	78.006	Ficedula_albicollis
ENSSDUG00000001413	dhx38	99	81.987	ENSFDAG00000015601	DHX38	99	82.229	Fukomys_damarensis
ENSSDUG00000001413	dhx38	99	93.008	ENSFHEG00000006031	dhx38	98	92.927	Fundulus_heteroclitus
ENSSDUG00000001413	dhx38	100	88.720	ENSGMOG00000002840	dhx38	100	88.720	Gadus_morhua
ENSSDUG00000001413	dhx38	99	79.743	ENSGALG00000000787	DHX38	99	79.743	Gallus_gallus
ENSSDUG00000001413	dhx38	99	93.252	ENSGAFG00000017271	dhx38	98	93.252	Gambusia_affinis
ENSSDUG00000001413	dhx38	100	92.382	ENSGACG00000015776	dhx38	100	92.302	Gasterosteus_aculeatus
ENSSDUG00000001413	dhx38	99	80.834	ENSGAGG00000015601	DHX38	99	81.090	Gopherus_agassizii
ENSSDUG00000001413	dhx38	99	81.260	ENSGGOG00000013052	DHX38	99	82.391	Gorilla_gorilla
ENSSDUG00000001413	dhx38	100	95.620	ENSHBUG00000013363	dhx38	98	95.620	Haplochromis_burtoni
ENSSDUG00000001413	dhx38	99	82.149	ENSHGLG00000013308	DHX38	99	82.391	Heterocephalus_glaber_female
ENSSDUG00000001413	dhx38	99	81.341	ENSHGLG00100015625	DHX38	99	81.583	Heterocephalus_glaber_male
ENSSDUG00000001413	dhx38	100	91.389	ENSHCOG00000003102	dhx38	100	90.713	Hippocampus_comes
ENSSDUG00000001413	dhx38	100	87.990	ENSIPUG00000006233	DHX38	99	89.314	Ictalurus_punctatus
ENSSDUG00000001413	dhx38	99	82.082	ENSSTOG00000000534	DHX38	99	82.082	Ictidomys_tridecemlineatus
ENSSDUG00000001413	dhx38	93	89.692	ENSJJAG00000015149	Dhx38	99	89.276	Jaculus_jaculus
ENSSDUG00000001413	dhx38	100	93.912	ENSKMAG00000006694	dhx38	100	92.277	Kryptolebias_marmoratus
ENSSDUG00000001413	dhx38	99	91.520	ENSLBEG00000026364	dhx38	99	91.520	Labrus_bergylta
ENSSDUG00000001413	dhx38	99	78.829	ENSLACG00000013007	DHX38	99	79.247	Latimeria_chalumnae
ENSSDUG00000001413	dhx38	100	87.196	ENSLOCG00000004169	dhx38	100	87.192	Lepisosteus_oculatus
ENSSDUG00000001413	dhx38	99	82.310	ENSLAFG00000016360	DHX38	99	82.149	Loxodonta_africana
ENSSDUG00000001413	dhx38	99	81.260	ENSMFAG00000031852	DHX38	99	82.310	Macaca_fascicularis
ENSSDUG00000001413	dhx38	99	81.179	ENSMMUG00000000677	DHX38	99	82.229	Macaca_mulatta
ENSSDUG00000001413	dhx38	99	81.260	ENSMNEG00000045083	DHX38	99	82.310	Macaca_nemestrina
ENSSDUG00000001413	dhx38	99	81.341	ENSMLEG00000029417	DHX38	99	82.391	Mandrillus_leucophaeus
ENSSDUG00000001413	dhx38	100	94.399	ENSMAMG00000021512	dhx38	100	93.471	Mastacembelus_armatus
ENSSDUG00000001413	dhx38	100	92.776	ENSMZEG00005014283	dhx38	100	90.996	Maylandia_zebra
ENSSDUG00000001413	dhx38	91	82.628	ENSMGAG00000008791	DHX38	100	82.384	Meleagris_gallopavo
ENSSDUG00000001413	dhx38	84	86.098	ENSMAUG00000006330	Dhx38	100	87.024	Mesocricetus_auratus
ENSSDUG00000001413	dhx38	99	82.149	ENSMICG00000011402	DHX38	99	82.391	Microcebus_murinus
ENSSDUG00000001413	dhx38	99	79.790	ENSMOCG00000016798	Dhx38	99	80.113	Microtus_ochrogaster
ENSSDUG00000001413	dhx38	100	92.351	ENSMMOG00000016558	dhx38	100	92.351	Mola_mola
ENSSDUG00000001413	dhx38	99	81.826	ENSMODG00000002549	DHX38	99	82.229	Monodelphis_domestica
ENSSDUG00000001413	dhx38	100	94.118	ENSMALG00000021005	dhx38	100	92.637	Monopterus_albus
ENSSDUG00000001413	dhx38	99	82.229	MGP_CAROLIEiJ_G0031541	Dhx38	99	82.229	Mus_caroli
ENSSDUG00000001413	dhx38	99	82.229	ENSMUSG00000037993	Dhx38	99	82.229	Mus_musculus
ENSSDUG00000001413	dhx38	99	82.068	MGP_PahariEiJ_G0023141	Dhx38	99	82.068	Mus_pahari
ENSSDUG00000001413	dhx38	99	82.310	MGP_SPRETEiJ_G0032659	Dhx38	99	82.310	Mus_spretus
ENSSDUG00000001413	dhx38	99	81.826	ENSMPUG00000007766	DHX38	99	81.987	Mustela_putorius_furo
ENSSDUG00000001413	dhx38	99	81.422	ENSMLUG00000013866	DHX38	99	82.229	Myotis_lucifugus
ENSSDUG00000001413	dhx38	99	82.068	ENSNGAG00000014084	Dhx38	99	82.258	Nannospalax_galili
ENSSDUG00000001413	dhx38	100	91.714	ENSNBRG00000010899	dhx38	99	91.714	Neolamprologus_brichardi
ENSSDUG00000001413	dhx38	99	81.179	ENSNLEG00000005630	DHX38	99	82.068	Nomascus_leucogenys
ENSSDUG00000001413	dhx38	55	88.703	ENSMEUG00000007747	-	72	88.703	Notamacropus_eugenii
ENSSDUG00000001413	dhx38	99	72.478	ENSOPRG00000012142	-	99	72.661	Ochotona_princeps
ENSSDUG00000001413	dhx38	99	79.773	ENSOPRG00000001884	DHX38	99	79.935	Ochotona_princeps
ENSSDUG00000001413	dhx38	99	81.987	ENSODEG00000015472	DHX38	99	82.229	Octodon_degus
ENSSDUG00000001413	dhx38	100	95.539	ENSONIG00000005916	dhx38	98	95.539	Oreochromis_niloticus
ENSSDUG00000001413	dhx38	99	81.179	ENSOCUG00000009067	DHX38	99	81.422	Oryctolagus_cuniculus
ENSSDUG00000001413	dhx38	99	92.445	ENSORLG00000007853	dhx38	98	92.445	Oryzias_latipes
ENSSDUG00000001413	dhx38	99	92.445	ENSORLG00020009844	dhx38	98	92.445	Oryzias_latipes_hni
ENSSDUG00000001413	dhx38	99	92.364	ENSORLG00015007999	dhx38	98	92.364	Oryzias_latipes_hsok
ENSSDUG00000001413	dhx38	99	92.283	ENSOMEG00000001782	dhx38	99	91.069	Oryzias_melastigma
ENSSDUG00000001413	dhx38	99	81.935	ENSOGAG00000008658	DHX38	99	82.177	Otolemur_garnettii
ENSSDUG00000001413	dhx38	99	78.698	ENSOARG00000003723	DHX38	99	79.019	Ovis_aries
ENSSDUG00000001413	dhx38	99	81.179	ENSPPAG00000042488	DHX38	99	82.310	Pan_paniscus
ENSSDUG00000001413	dhx38	99	82.149	ENSPPRG00000008930	DHX38	99	82.229	Panthera_pardus
ENSSDUG00000001413	dhx38	99	82.149	ENSPTIG00000017274	DHX38	99	82.229	Panthera_tigris_altaica
ENSSDUG00000001413	dhx38	99	81.099	ENSPTRG00000008338	DHX38	99	82.229	Pan_troglodytes
ENSSDUG00000001413	dhx38	99	81.341	ENSPANG00000022057	DHX38	99	82.310	Papio_anubis
ENSSDUG00000001413	dhx38	100	87.942	ENSPKIG00000009708	dhx38	100	87.942	Paramormyrops_kingsleyae
ENSSDUG00000001413	dhx38	100	90.016	ENSPMGG00000006063	dhx38	100	90.016	Periophthalmus_magnuspinnatus
ENSSDUG00000001413	dhx38	99	82.310	ENSPEMG00000008011	Dhx38	99	82.310	Peromyscus_maniculatus_bairdii
ENSSDUG00000001413	dhx38	99	82.310	ENSPCIG00000001712	DHX38	99	82.659	Phascolarctos_cinereus
ENSSDUG00000001413	dhx38	99	92.892	ENSPFOG00000001246	dhx38	98	92.892	Poecilia_formosa
ENSSDUG00000001413	dhx38	99	93.171	ENSPLAG00000004022	dhx38	98	93.415	Poecilia_latipinna
ENSSDUG00000001413	dhx38	99	93.008	ENSPMEG00000015475	dhx38	98	93.252	Poecilia_mexicana
ENSSDUG00000001413	dhx38	99	92.419	ENSPREG00000023207	dhx38	99	92.661	Poecilia_reticulata
ENSSDUG00000001413	dhx38	99	80.710	ENSPPYG00000007515	DHX38	99	81.759	Pongo_abelii
ENSSDUG00000001413	dhx38	93	86.418	ENSPCAG00000010592	DHX38	93	86.121	Procavia_capensis
ENSSDUG00000001413	dhx38	99	82.068	ENSPCOG00000027770	DHX38	99	82.310	Propithecus_coquereli
ENSSDUG00000001413	dhx38	93	83.060	ENSPVAG00000010259	DHX38	100	83.405	Pteropus_vampyrus
ENSSDUG00000001413	dhx38	100	95.296	ENSPNYG00000013335	dhx38	99	95.296	Pundamilia_nyererei
ENSSDUG00000001413	dhx38	100	89.068	ENSPNAG00000004859	dhx38	100	89.148	Pygocentrus_nattereri
ENSSDUG00000001413	dhx38	99	81.987	ENSRNOG00000014619	Dhx38	99	82.229	Rattus_norvegicus
ENSSDUG00000001413	dhx38	99	81.260	ENSRBIG00000025475	DHX38	99	82.310	Rhinopithecus_bieti
ENSSDUG00000001413	dhx38	99	81.260	ENSRROG00000028630	DHX38	99	82.310	Rhinopithecus_roxellana
ENSSDUG00000001413	dhx38	60	49.743	YKR086W	PRP16	71	49.743	Saccharomyces_cerevisiae
ENSSDUG00000001413	dhx38	99	81.260	ENSSBOG00000021842	DHX38	99	82.310	Saimiri_boliviensis_boliviensis
ENSSDUG00000001413	dhx38	99	73.553	ENSSHAG00000016871	DHX38	99	73.355	Sarcophilus_harrisii
ENSSDUG00000001413	dhx38	100	87.258	ENSSFOG00015014930	dhx38	100	87.351	Scleropages_formosus
ENSSDUG00000001413	dhx38	100	95.126	ENSSMAG00000000095	dhx38	98	95.045	Scophthalmus_maximus
ENSSDUG00000001413	dhx38	100	96.263	ENSSLDG00000021050	dhx38	100	96.263	Seriola_lalandi_dorsalis
ENSSDUG00000001413	dhx38	100	96.347	ENSSPAG00000020537	dhx38	100	96.347	Stegastes_partitus
ENSSDUG00000001413	dhx38	99	90.702	ENSSSCG00000002748	DHX38	92	90.020	Sus_scrofa
ENSSDUG00000001413	dhx38	99	76.309	ENSTGUG00000008196	DHX38	99	76.793	Taeniopygia_guttata
ENSSDUG00000001413	dhx38	100	91.477	ENSTRUG00000017588	dhx38	100	91.346	Takifugu_rubripes
ENSSDUG00000001413	dhx38	100	89.719	ENSTNIG00000009345	dhx38	99	89.719	Tetraodon_nigroviridis
ENSSDUG00000001413	dhx38	99	71.890	ENSTBEG00000001426	DHX38	99	72.052	Tupaia_belangeri
ENSSDUG00000001413	dhx38	99	77.276	ENSTTRG00000001914	DHX38	99	77.518	Tursiops_truncatus
ENSSDUG00000001413	dhx38	99	82.244	ENSUAMG00000020435	DHX38	99	82.244	Ursus_americanus
ENSSDUG00000001413	dhx38	99	81.260	ENSUMAG00000018189	DHX38	99	81.260	Ursus_maritimus
ENSSDUG00000001413	dhx38	99	82.149	ENSVVUG00000017474	DHX38	99	82.472	Vulpes_vulpes
ENSSDUG00000001413	dhx38	100	78.606	ENSXETG00000023447	dhx38	100	79.030	Xenopus_tropicalis
ENSSDUG00000001413	dhx38	99	92.520	ENSXCOG00000011321	dhx38	99	92.029	Xiphophorus_couchianus
ENSSDUG00000001413	dhx38	99	93.577	ENSXMAG00000003292	dhx38	98	93.577	Xiphophorus_maculatus