EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000001451 (Gene tree)
Gene ID: 111239971
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111239971
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 7136 bases
Position: chrBDQW01006988.1:140057-147192
Accession: 111239971
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001824	MMR_HSR1	PF01926.23	3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001908	-	786	-	ENSSDUP00000001846	261 (aa)	-	-
ENSSDUT00000001886	-	4530	XM_022769934	ENSSDUP00000001824	1188 (aa)	XP_022625655	UPI000BBE6FFE

Gene Model

Click here to download ENSSDUG00000001451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000001451	-	72	83.255	ENSSDUG00000001575	-	62	83.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001451	-	97	83.010	ENSATEG00000011040	-	89	83.010	Anabas_testudineus
ENSSDUG00000001451	-	78	60.831	ENSACLG00000001833	-	98	59.868	Astatotilapia_calliptera
ENSSDUG00000001451	-	76	56.833	ENSCVAG00000003284	-	91	56.705	Cyprinodon_variegatus
ENSSDUG00000001451	-	55	56.795	ENSFHEG00000010603	-	94	53.584	Fundulus_heteroclitus
ENSSDUG00000001451	-	60	53.559	ENSFHEG00000010614	-	94	53.546	Fundulus_heteroclitus
ENSSDUG00000001451	-	64	55.256	ENSGAFG00000006087	-	97	55.939	Gambusia_affinis
ENSSDUG00000001451	-	73	61.224	ENSHBUG00000018072	-	99	61.224	Haplochromis_burtoni
ENSSDUG00000001451	-	60	57.877	ENSHBUG00000015375	-	99	59.886	Haplochromis_burtoni
ENSSDUG00000001451	-	67	56.013	ENSKMAG00000011735	-	99	55.063	Kryptolebias_marmoratus
ENSSDUG00000001451	-	99	67.394	ENSLBEG00000015796	-	99	65.799	Labrus_bergylta
ENSSDUG00000001451	-	81	64.894	ENSMAMG00000013245	-	88	64.894	Mastacembelus_armatus
ENSSDUG00000001451	-	52	57.914	ENSOMEG00000018335	-	97	55.294	Oryzias_melastigma
ENSSDUG00000001451	-	53	58.010	ENSOMEG00000018412	-	91	58.010	Oryzias_melastigma
ENSSDUG00000001451	-	64	55.311	ENSPMEG00000009099	-	97	56.186	Poecilia_mexicana
ENSSDUG00000001451	-	61	53.756	ENSPMEG00000009067	-	93	53.667	Poecilia_mexicana
ENSSDUG00000001451	-	54	53.704	ENSPREG00000006740	-	86	53.859	Poecilia_reticulata
ENSSDUG00000001451	-	94	69.333	ENSSMAG00000003569	-	94	69.333	Scophthalmus_maximus
ENSSDUG00000001451	-	87	53.895	ENSXMAG00000028779	-	99	54.511	Xiphophorus_maculatus