EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000001461 (Gene tree)
Gene ID: 111228173
Gene Symbol: tent5bb
Alias: fam46bb|si:dkey-181o6.1
Full Name: protein FAM46A-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 14231 bases
Position: chrBDQW01000202.1:555083-569313
Accession: 111228173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000001861	NTP_transf_7	PF07984.12	5.1e-157	1	1
ENSSDUP00000001847	NTP_transf_7	PF07984.12	2e-139	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000001909	-	1918	-	ENSSDUP00000001847	401 (aa)	-	-
ENSSDUT00000001923	-	2616	XM_022753977	ENSSDUP00000001861	393 (aa)	XP_022609698	UPI000BBE4C19

Gene Model

Click here to download ENSSDUG00000001461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000001461	tent5bb	68	64.794	ENSSDUG00000014400	tent5c	88	64.794
ENSSDUG00000001461	tent5bb	94	61.436	ENSSDUG00000011768	-	94	61.436
ENSSDUG00000001461	tent5bb	95	60.695	ENSSDUG00000014579	tent5d	95	60.695
ENSSDUG00000001461	tent5bb	98	73.247	ENSSDUG00000009273	TENT5A	96	73.247
ENSSDUG00000001461	tent5bb	100	85.533	ENSSDUG00000017177	tent5ba	100	85.533
ENSSDUG00000001461	tent5bb	98	69.870	ENSSDUG00000011243	tent5ab	98	69.870

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001461	tent5bb	100	97.455	ENSAPOG00000013301	tent5bb	100	97.455	Acanthochromis_polyacanthus
ENSSDUG00000001461	tent5bb	99	84.184	ENSAPOG00000001189	tent5ba	99	84.184	Acanthochromis_polyacanthus
ENSSDUG00000001461	tent5bb	68	85.130	ENSACIG00000010290	tent5ba	90	85.130	Amphilophus_citrinellus
ENSSDUG00000001461	tent5bb	100	95.929	ENSACIG00000020894	tent5bb	100	95.929	Amphilophus_citrinellus
ENSSDUG00000001461	tent5bb	99	84.184	ENSAOCG00000018686	tent5ba	99	84.184	Amphiprion_ocellaris
ENSSDUG00000001461	tent5bb	100	97.455	ENSAOCG00000021898	tent5bb	100	97.455	Amphiprion_ocellaris
ENSSDUG00000001461	tent5bb	100	96.947	ENSAPEG00000004406	tent5bb	100	96.947	Amphiprion_percula
ENSSDUG00000001461	tent5bb	99	84.184	ENSAPEG00000018735	tent5ba	99	84.184	Amphiprion_percula
ENSSDUG00000001461	tent5bb	100	96.183	ENSATEG00000009686	tent5bb	100	96.183	Anabas_testudineus
ENSSDUG00000001461	tent5bb	100	86.041	ENSATEG00000023735	tent5ba	100	86.041	Anabas_testudineus
ENSSDUG00000001461	tent5bb	100	95.165	ENSACLG00000009811	tent5bb	100	95.165	Astatotilapia_calliptera
ENSSDUG00000001461	tent5bb	98	85.309	ENSACLG00000012695	tent5ba	99	85.309	Astatotilapia_calliptera
ENSSDUG00000001461	tent5bb	99	89.031	ENSAMXG00000032411	tent5bb	99	89.031	Astyanax_mexicanus
ENSSDUG00000001461	tent5bb	100	82.443	ENSAMXG00000037518	tent5ba	100	82.443	Astyanax_mexicanus
ENSSDUG00000001461	tent5bb	100	84.304	ENSCSEG00000005309	tent5ba	100	84.304	Cynoglossus_semilaevis
ENSSDUG00000001461	tent5bb	87	85.423	ENSCVAG00000020190	tent5ba	86	85.423	Cyprinodon_variegatus
ENSSDUG00000001461	tent5bb	100	91.349	ENSCVAG00000013534	tent5bb	100	91.349	Cyprinodon_variegatus
ENSSDUG00000001461	tent5bb	100	87.532	ENSDARG00000011797	tent5bb	100	87.532	Danio_rerio
ENSSDUG00000001461	tent5bb	100	84.478	ENSDARG00000039943	tent5ba	100	84.478	Danio_rerio
ENSSDUG00000001461	tent5bb	99	80.818	ENSELUG00000022605	tent5ba	98	80.818	Esox_lucius
ENSSDUG00000001461	tent5bb	100	86.902	ENSELUG00000011161	tent5bb	100	86.902	Esox_lucius
ENSSDUG00000001461	tent5bb	99	84.319	ENSFHEG00000015561	tent5ba	99	84.319	Fundulus_heteroclitus
ENSSDUG00000001461	tent5bb	100	92.621	ENSFHEG00000005285	tent5bb	100	92.621	Fundulus_heteroclitus
ENSSDUG00000001461	tent5bb	100	90.609	ENSGMOG00000018930	tent5bb	99	90.609	Gadus_morhua
ENSSDUG00000001461	tent5bb	87	79.942	ENSGMOG00000019728	-	100	79.942	Gadus_morhua
ENSSDUG00000001461	tent5bb	99	85.090	ENSGAFG00000002722	tent5ba	99	85.090	Gambusia_affinis
ENSSDUG00000001461	tent5bb	100	92.621	ENSGAFG00000000761	tent5bb	100	92.621	Gambusia_affinis
ENSSDUG00000001461	tent5bb	100	92.875	ENSGACG00000007689	tent5bb	99	92.875	Gasterosteus_aculeatus
ENSSDUG00000001461	tent5bb	100	84.264	ENSGACG00000007269	tent5ba	97	84.085	Gasterosteus_aculeatus
ENSSDUG00000001461	tent5bb	98	85.309	ENSHBUG00000020683	tent5ba	99	85.309	Haplochromis_burtoni
ENSSDUG00000001461	tent5bb	99	95.153	ENSHBUG00000010176	tent5bb	99	95.153	Haplochromis_burtoni
ENSSDUG00000001461	tent5bb	100	81.980	ENSHCOG00000005840	tent5ba	100	81.980	Hippocampus_comes
ENSSDUG00000001461	tent5bb	99	83.418	ENSIPUG00000016887	fam46b	99	83.418	Ictalurus_punctatus
ENSSDUG00000001461	tent5bb	99	81.633	ENSIPUG00000010747	FAM46A	99	81.633	Ictalurus_punctatus
ENSSDUG00000001461	tent5bb	100	91.858	ENSKMAG00000012836	tent5bb	100	91.858	Kryptolebias_marmoratus
ENSSDUG00000001461	tent5bb	100	83.756	ENSKMAG00000013207	tent5ba	100	83.756	Kryptolebias_marmoratus
ENSSDUG00000001461	tent5bb	100	94.402	ENSLBEG00000001602	tent5bb	100	94.402	Labrus_bergylta
ENSSDUG00000001461	tent5bb	100	85.787	ENSLBEG00000007247	tent5ba	100	85.787	Labrus_bergylta
ENSSDUG00000001461	tent5bb	100	94.402	ENSLBEG00000005911	-	100	94.402	Labrus_bergylta
ENSSDUG00000001461	tent5bb	100	83.715	ENSLOCG00000003743	tent5bb	100	83.715	Lepisosteus_oculatus
ENSSDUG00000001461	tent5bb	100	97.201	ENSMAMG00000002667	tent5bb	86	97.201	Mastacembelus_armatus
ENSSDUG00000001461	tent5bb	100	84.772	ENSMAMG00000023970	tent5ba	100	84.772	Mastacembelus_armatus
ENSSDUG00000001461	tent5bb	98	85.309	ENSMZEG00005019712	tent5ba	99	85.309	Maylandia_zebra
ENSSDUG00000001461	tent5bb	100	95.165	ENSMZEG00005016765	tent5bb	100	95.165	Maylandia_zebra
ENSSDUG00000001461	tent5bb	100	95.929	ENSMMOG00000014403	tent5bb	100	95.929	Mola_mola
ENSSDUG00000001461	tent5bb	98	84.675	ENSMMOG00000008974	tent5ba	99	84.675	Mola_mola
ENSSDUG00000001461	tent5bb	100	84.264	ENSMALG00000007424	tent5ba	100	84.264	Monopterus_albus
ENSSDUG00000001461	tent5bb	100	94.402	ENSMALG00000016702	tent5bb	100	94.402	Monopterus_albus
ENSSDUG00000001461	tent5bb	98	85.309	ENSNBRG00000000536	tent5ba	99	85.309	Neolamprologus_brichardi
ENSSDUG00000001461	tent5bb	100	95.165	ENSNBRG00000021689	tent5bb	100	95.165	Neolamprologus_brichardi
ENSSDUG00000001461	tent5bb	100	95.420	ENSONIG00000007603	tent5bb	100	95.420	Oreochromis_niloticus
ENSSDUG00000001461	tent5bb	98	85.309	ENSONIG00000006760	tent5ba	99	85.309	Oreochromis_niloticus
ENSSDUG00000001461	tent5bb	100	93.893	ENSORLG00000020877	tent5bb	97	93.893	Oryzias_latipes
ENSSDUG00000001461	tent5bb	99	84.833	ENSORLG00000028579	tent5ba	99	84.833	Oryzias_latipes
ENSSDUG00000001461	tent5bb	99	84.833	ENSORLG00020022604	tent5ba	100	84.399	Oryzias_latipes_hni
ENSSDUG00000001461	tent5bb	100	93.893	ENSORLG00020020448	tent5bb	97	93.893	Oryzias_latipes_hni
ENSSDUG00000001461	tent5bb	99	84.833	ENSORLG00015008860	tent5ba	99	84.833	Oryzias_latipes_hsok
ENSSDUG00000001461	tent5bb	100	93.893	ENSORLG00015008671	tent5bb	97	93.893	Oryzias_latipes_hsok
ENSSDUG00000001461	tent5bb	99	86.118	ENSOMEG00000010794	tent5ba	99	86.118	Oryzias_melastigma
ENSSDUG00000001461	tent5bb	100	81.170	ENSPKIG00000013826	-	100	81.170	Paramormyrops_kingsleyae
ENSSDUG00000001461	tent5bb	100	85.496	ENSPKIG00000020331	-	100	85.496	Paramormyrops_kingsleyae
ENSSDUG00000001461	tent5bb	100	83.756	ENSPMGG00000001810	tent5ba	100	83.756	Periophthalmus_magnuspinnatus
ENSSDUG00000001461	tent5bb	98	90.625	ENSPMGG00000016426	tent5bb	98	90.625	Periophthalmus_magnuspinnatus
ENSSDUG00000001461	tent5bb	100	91.603	ENSPFOG00000002816	tent5bb	100	91.603	Poecilia_formosa
ENSSDUG00000001461	tent5bb	99	85.347	ENSPFOG00000009565	tent5ba	99	85.347	Poecilia_formosa
ENSSDUG00000001461	tent5bb	99	91.753	ENSPLAG00000008840	tent5bb	99	91.753	Poecilia_latipinna
ENSSDUG00000001461	tent5bb	95	86.096	ENSPLAG00000002262	tent5ba	90	86.096	Poecilia_latipinna
ENSSDUG00000001461	tent5bb	100	91.858	ENSPMEG00000012300	tent5bb	100	91.858	Poecilia_mexicana
ENSSDUG00000001461	tent5bb	99	85.347	ENSPMEG00000010433	tent5ba	99	85.347	Poecilia_mexicana
ENSSDUG00000001461	tent5bb	99	85.090	ENSPREG00000008620	tent5ba	99	85.090	Poecilia_reticulata
ENSSDUG00000001461	tent5bb	97	85.263	ENSPREG00000014751	tent5bb	75	87.228	Poecilia_reticulata
ENSSDUG00000001461	tent5bb	98	85.309	ENSPNYG00000005263	tent5ba	99	85.309	Pundamilia_nyererei
ENSSDUG00000001461	tent5bb	100	94.911	ENSPNYG00000005829	tent5bb	100	94.911	Pundamilia_nyererei
ENSSDUG00000001461	tent5bb	98	89.637	ENSPNAG00000025421	tent5bb	96	89.258	Pygocentrus_nattereri
ENSSDUG00000001461	tent5bb	100	85.242	ENSPNAG00000022093	tent5ba	100	85.242	Pygocentrus_nattereri
ENSSDUG00000001461	tent5bb	100	82.443	ENSSFOG00015022222	tent5bb	100	82.443	Scleropages_formosus
ENSSDUG00000001461	tent5bb	100	93.384	ENSSMAG00000020437	tent5bb	88	92.068	Scophthalmus_maximus
ENSSDUG00000001461	tent5bb	100	85.533	ENSSMAG00000002009	tent5ba	100	85.533	Scophthalmus_maximus
ENSSDUG00000001461	tent5bb	100	85.533	ENSSLDG00000016410	tent5ba	100	85.533	Seriola_lalandi_dorsalis
ENSSDUG00000001461	tent5bb	100	99.746	ENSSLDG00000020016	tent5bb	100	99.746	Seriola_lalandi_dorsalis
ENSSDUG00000001461	tent5bb	99	84.439	ENSSPAG00000012949	tent5ba	99	84.439	Stegastes_partitus
ENSSDUG00000001461	tent5bb	100	97.201	ENSSPAG00000006276	tent5bb	86	97.201	Stegastes_partitus
ENSSDUG00000001461	tent5bb	100	85.533	ENSTRUG00000019516	tent5ba	100	85.533	Takifugu_rubripes
ENSSDUG00000001461	tent5bb	100	94.148	ENSTRUG00000010330	tent5bb	100	94.148	Takifugu_rubripes
ENSSDUG00000001461	tent5bb	100	87.786	ENSTNIG00000014035	tent5bb	99	87.786	Tetraodon_nigroviridis
ENSSDUG00000001461	tent5bb	100	83.461	ENSTNIG00000009661	tent5ba	99	83.461	Tetraodon_nigroviridis
ENSSDUG00000001461	tent5bb	87	92.375	ENSXCOG00000007280	tent5bb	93	92.375	Xiphophorus_couchianus
ENSSDUG00000001461	tent5bb	98	85.455	ENSXCOG00000016124	tent5ba	99	85.455	Xiphophorus_couchianus
ENSSDUG00000001461	tent5bb	100	92.366	ENSXMAG00000022155	tent5bb	100	92.366	Xiphophorus_maculatus
ENSSDUG00000001461	tent5bb	99	85.090	ENSXMAG00000010694	tent5ba	99	85.090	Xiphophorus_maculatus