EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001552 (Gene tree)
Gene ID: 111216985
Gene Symbol: tyw1
Alias: im:6898509|wu:fb74d01|zgc:153368
Full Name: tRNA-yW synthesizing protein 1 homolog
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 61256 bases
Position: chrBDQW01000036.1:417624-478879
Accession: 111216985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002031	Wyosine_form	PF08608.12	2.1e-27	1	1
ENSSDUP00000001999	Wyosine_form	PF08608.12	2.3e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002062	-	3850	XM_022738668	ENSSDUP00000001999	754 (aa)	XP_022594389	UPI000BBE4934
ENSSDUT00000002095	-	2106	-	ENSSDUP00000002031	701 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000001552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001552	tyw1	91	64.615	ENSG00000277149	TYW1B	93	65.385	Homo_sapiens
ENSSDUG00000001552	tyw1	95	70.398	ENSG00000198874	TYW1	98	67.764	Homo_sapiens
ENSSDUG00000001552	tyw1	100	88.344	ENSAPOG00000014391	tyw1	100	88.344	Acanthochromis_polyacanthus
ENSSDUG00000001552	tyw1	93	87.652	ENSACIG00000007325	tyw1	100	83.288	Amphilophus_citrinellus
ENSSDUG00000001552	tyw1	100	89.007	ENSAOCG00000016792	tyw1	100	88.874	Amphiprion_ocellaris
ENSSDUG00000001552	tyw1	100	89.139	ENSAPEG00000015939	tyw1	100	89.007	Amphiprion_percula
ENSSDUG00000001552	tyw1	91	87.408	ENSATEG00000006856	tyw1	94	87.408	Anabas_testudineus
ENSSDUG00000001552	tyw1	93	70.827	ENSANAG00000037051	-	98	66.575	Aotus_nancymaae
ENSSDUG00000001552	tyw1	100	85.942	ENSACLG00000018688	tyw1	100	85.809	Astatotilapia_calliptera
ENSSDUG00000001552	tyw1	94	80.061	ENSAMXG00000004157	tyw1	98	76.309	Astyanax_mexicanus
ENSSDUG00000001552	tyw1	93	72.741	ENSBTAG00000008446	TYW1	98	67.950	Bos_taurus
ENSSDUG00000001552	tyw1	95	69.867	ENSCJAG00000004295	-	98	66.350	Callithrix_jacchus
ENSSDUG00000001552	tyw1	95	72.114	ENSCAFG00000010867	-	98	68.033	Canis_familiaris
ENSSDUG00000001552	tyw1	94	65.813	ENSCAFG00020005367	-	98	64.317	Canis_lupus_dingo
ENSSDUG00000001552	tyw1	93	73.002	ENSCHIG00000019510	-	98	68.044	Capra_hircus
ENSSDUG00000001552	tyw1	83	71.501	ENSTSYG00000008236	-	98	66.972	Carlito_syrichta
ENSSDUG00000001552	tyw1	90	64.642	ENSCAPG00000013569	-	100	65.116	Cavia_aperea
ENSSDUG00000001552	tyw1	93	68.889	ENSCPOG00000011182	-	99	66.213	Cavia_porcellus
ENSSDUG00000001552	tyw1	95	71.196	ENSCCAG00000026643	-	98	67.538	Cebus_capucinus
ENSSDUG00000001552	tyw1	95	70.103	ENSCATG00000043677	-	98	67.353	Cercocebus_atys
ENSSDUG00000001552	tyw1	93	69.760	ENSCLAG00000006321	-	99	66.485	Chinchilla_lanigera
ENSSDUG00000001552	tyw1	87	71.455	ENSCSAG00000018274	-	98	71.818	Chlorocebus_sabaeus
ENSSDUG00000001552	tyw1	52	82.479	ENSCHOG00000003801	-	56	82.479	Choloepus_hoffmanni
ENSSDUG00000001552	tyw1	100	67.059	ENSCPBG00000014896	-	100	72.943	Chrysemys_picta_bellii
ENSSDUG00000001552	tyw1	83	58.814	ENSCING00000004125	-	97	59.729	Ciona_intestinalis
ENSSDUG00000001552	tyw1	54	70.332	ENSCSAVG00000005712	-	100	55.778	Ciona_savignyi
ENSSDUG00000001552	tyw1	95	70.103	ENSCANG00000033209	-	98	67.353	Colobus_angolensis_palliatus
ENSSDUG00000001552	tyw1	68	76.659	ENSCGRG00001003679	Tyw1	88	76.351	Cricetulus_griseus_chok1gshd
ENSSDUG00000001552	tyw1	100	83.069	ENSCSEG00000005810	tyw1	98	83.179	Cynoglossus_semilaevis
ENSSDUG00000001552	tyw1	91	80.527	ENSCVAG00000001054	tyw1	96	80.820	Cyprinodon_variegatus
ENSSDUG00000001552	tyw1	98	76.471	ENSDARG00000062987	tyw1	99	75.629	Danio_rerio
ENSSDUG00000001552	tyw1	95	71.598	ENSDNOG00000024165	-	98	68.457	Dasypus_novemcinctus
ENSSDUG00000001552	tyw1	88	64.320	ENSDORG00000014772	Tyw1	91	64.640	Dipodomys_ordii
ENSSDUG00000001552	tyw1	54	48.429	ENSETEG00000009904	-	84	48.429	Echinops_telfairi
ENSSDUG00000001552	tyw1	61	74.074	ENSEBUG00000004494	tyw1	91	74.074	Eptatretus_burgeri
ENSSDUG00000001552	tyw1	95	71.598	ENSEASG00005008818	-	99	68.320	Equus_asinus_asinus
ENSSDUG00000001552	tyw1	95	66.117	ENSECAG00000023164	-	99	62.397	Equus_caballus
ENSSDUG00000001552	tyw1	59	80.412	ENSEEUG00000005950	-	57	79.592	Erinaceus_europaeus
ENSSDUG00000001552	tyw1	98	77.299	ENSELUG00000008449	tyw1	100	73.294	Esox_lucius
ENSSDUG00000001552	tyw1	93	73.435	ENSFCAG00000014262	-	98	68.076	Felis_catus
ENSSDUG00000001552	tyw1	95	68.155	ENSFALG00000013810	-	99	64.973	Ficedula_albicollis
ENSSDUG00000001552	tyw1	95	68.336	ENSFDAG00000013270	-	98	66.345	Fukomys_damarensis
ENSSDUG00000001552	tyw1	86	82.382	ENSFHEG00000020824	tyw1	81	82.172	Fundulus_heteroclitus
ENSSDUG00000001552	tyw1	93	71.299	ENSGALG00000001110	-	98	66.986	Gallus_gallus
ENSSDUG00000001552	tyw1	97	83.106	ENSGACG00000012692	tyw1	99	83.106	Gasterosteus_aculeatus
ENSSDUG00000001552	tyw1	93	71.772	ENSGAGG00000022393	-	98	68.493	Gopherus_agassizii
ENSSDUG00000001552	tyw1	85	61.881	ENSGGOG00000001473	TYW1	98	59.604	Gorilla_gorilla
ENSSDUG00000001552	tyw1	100	85.676	ENSHBUG00000002640	tyw1	100	85.544	Haplochromis_burtoni
ENSSDUG00000001552	tyw1	91	67.818	ENSHGLG00000012093	-	100	67.818	Heterocephalus_glaber_female
ENSSDUG00000001552	tyw1	93	69.611	ENSHGLG00100011743	TYW1	98	66.392	Heterocephalus_glaber_male
ENSSDUG00000001552	tyw1	92	73.538	ENSHCOG00000019949	tyw1	97	67.659	Hippocampus_comes
ENSSDUG00000001552	tyw1	94	78.485	ENSIPUG00000016330	tyw1	100	72.870	Ictalurus_punctatus
ENSSDUG00000001552	tyw1	95	68.483	ENSSTOG00000004067	-	90	66.529	Ictidomys_tridecemlineatus
ENSSDUG00000001552	tyw1	93	69.428	ENSJJAG00000022959	Tyw1	98	66.022	Jaculus_jaculus
ENSSDUG00000001552	tyw1	96	86.892	ENSKMAG00000018599	tyw1	100	82.626	Kryptolebias_marmoratus
ENSSDUG00000001552	tyw1	95	69.016	ENSLACG00000018917	tyw1	96	66.213	Latimeria_chalumnae
ENSSDUG00000001552	tyw1	94	76.751	ENSLOCG00000004035	tyw1	95	73.764	Lepisosteus_oculatus
ENSSDUG00000001552	tyw1	95	70.250	ENSMFAG00000035457	-	98	67.627	Macaca_fascicularis
ENSSDUG00000001552	tyw1	95	70.250	ENSMMUG00000030374	-	98	67.627	Macaca_mulatta
ENSSDUG00000001552	tyw1	95	70.250	ENSMNEG00000041992	-	98	71.818	Macaca_nemestrina
ENSSDUG00000001552	tyw1	95	70.250	ENSMLEG00000039741	-	98	67.490	Mandrillus_leucophaeus
ENSSDUG00000001552	tyw1	98	89.295	ENSMAMG00000016089	tyw1	99	88.462	Mastacembelus_armatus
ENSSDUG00000001552	tyw1	96	89.137	ENSMZEG00005024386	tyw1	98	88.988	Maylandia_zebra
ENSSDUG00000001552	tyw1	93	70.783	ENSMGAG00000002176	-	98	66.438	Meleagris_gallopavo
ENSSDUG00000001552	tyw1	93	70.651	ENSMAUG00000002959	Tyw1	98	66.529	Mesocricetus_auratus
ENSSDUG00000001552	tyw1	95	71.029	ENSMICG00000014374	-	99	68.356	Microcebus_murinus
ENSSDUG00000001552	tyw1	93	69.789	ENSMOCG00000017720	Tyw1	98	66.391	Microtus_ochrogaster
ENSSDUG00000001552	tyw1	93	84.462	ENSMMOG00000005064	tyw1	99	80.082	Mola_mola
ENSSDUG00000001552	tyw1	94	69.118	ENSMODG00000025697	-	98	67.166	Monodelphis_domestica
ENSSDUG00000001552	tyw1	100	87.401	ENSMALG00000010238	tyw1	100	87.401	Monopterus_albus
ENSSDUG00000001552	tyw1	94	69.865	MGP_CAROLIEiJ_G0027801	Tyw1	99	66.390	Mus_caroli
ENSSDUG00000001552	tyw1	94	70.015	ENSMUSG00000056310	Tyw1	99	66.943	Mus_musculus
ENSSDUG00000001552	tyw1	94	70.526	MGP_PahariEiJ_G0024383	Tyw1	99	66.621	Mus_pahari
ENSSDUG00000001552	tyw1	94	69.715	MGP_SPRETEiJ_G0028799	Tyw1	99	66.252	Mus_spretus
ENSSDUG00000001552	tyw1	93	72.061	ENSMPUG00000016191	-	95	71.603	Mustela_putorius_furo
ENSSDUG00000001552	tyw1	95	68.421	ENSMLUG00000013582	-	99	66.122	Myotis_lucifugus
ENSSDUG00000001552	tyw1	95	69.792	ENSNGAG00000002742	Tyw1	99	66.346	Nannospalax_galili
ENSSDUG00000001552	tyw1	96	85.417	ENSNBRG00000016996	tyw1	98	83.792	Neolamprologus_brichardi
ENSSDUG00000001552	tyw1	95	69.809	ENSNLEG00000013210	-	97	66.804	Nomascus_leucogenys
ENSSDUG00000001552	tyw1	93	55.488	ENSOPRG00000008734	-	87	55.488	Ochotona_princeps
ENSSDUG00000001552	tyw1	93	64.662	ENSODEG00000014729	-	95	64.555	Octodon_degus
ENSSDUG00000001552	tyw1	100	84.483	ENSONIG00000005872	tyw1	100	84.350	Oreochromis_niloticus
ENSSDUG00000001552	tyw1	93	70.896	ENSOCUG00000003173	-	98	67.218	Oryctolagus_cuniculus
ENSSDUG00000001552	tyw1	95	85.351	ENSORLG00000001393	tyw1	99	80.000	Oryzias_latipes
ENSSDUG00000001552	tyw1	95	85.052	ENSORLG00020019361	tyw1	100	79.735	Oryzias_latipes_hni
ENSSDUG00000001552	tyw1	100	79.657	ENSORLG00015008095	tyw1	99	79.921	Oryzias_latipes_hsok
ENSSDUG00000001552	tyw1	93	72.455	ENSOGAG00000016555	-	99	67.394	Otolemur_garnettii
ENSSDUG00000001552	tyw1	93	72.605	ENSOARG00000010673	-	99	67.989	Ovis_aries
ENSSDUG00000001552	tyw1	93	73.435	ENSPPRG00000004945	-	98	68.044	Panthera_pardus
ENSSDUG00000001552	tyw1	93	73.435	ENSPTIG00000019545	-	98	68.044	Panthera_tigris_altaica
ENSSDUG00000001552	tyw1	95	64.912	ENSPTRG00000023076	TYW1B	97	62.791	Pan_troglodytes
ENSSDUG00000001552	tyw1	95	69.956	ENSPANG00000019053	-	98	67.353	Papio_anubis
ENSSDUG00000001552	tyw1	93	74.351	ENSPKIG00000006545	tyw1	96	70.856	Paramormyrops_kingsleyae
ENSSDUG00000001552	tyw1	96	80.854	ENSPMGG00000004240	tyw1	100	80.791	Periophthalmus_magnuspinnatus
ENSSDUG00000001552	tyw1	95	70.310	ENSPEMG00000008274	Tyw1	99	66.985	Peromyscus_maniculatus_bairdii
ENSSDUG00000001552	tyw1	96	85.799	ENSPFOG00000015855	tyw1	99	82.128	Poecilia_formosa
ENSSDUG00000001552	tyw1	96	85.799	ENSPLAG00000000838	tyw1	100	80.289	Poecilia_latipinna
ENSSDUG00000001552	tyw1	96	85.651	ENSPMEG00000019437	tyw1	100	80.420	Poecilia_mexicana
ENSSDUG00000001552	tyw1	96	81.563	ENSPREG00000018773	tyw1	99	77.973	Poecilia_reticulata
ENSSDUG00000001552	tyw1	95	70.398	ENSPPYG00000017514	TYW1	98	67.627	Pongo_abelii
ENSSDUG00000001552	tyw1	93	56.886	ENSPCOG00000015294	-	98	53.836	Propithecus_coquereli
ENSSDUG00000001552	tyw1	100	85.809	ENSPNYG00000022381	tyw1	100	85.676	Pundamilia_nyererei
ENSSDUG00000001552	tyw1	95	79.583	ENSPNAG00000009001	tyw1	98	77.186	Pygocentrus_nattereri
ENSSDUG00000001552	tyw1	94	70.060	ENSRNOG00000024352	Tyw1	98	66.391	Rattus_norvegicus
ENSSDUG00000001552	tyw1	95	70.103	ENSRBIG00000039619	-	98	67.353	Rhinopithecus_bieti
ENSSDUG00000001552	tyw1	95	69.956	ENSRROG00000039780	-	98	67.353	Rhinopithecus_roxellana
ENSSDUG00000001552	tyw1	92	40.508	YPL207W	-	76	40.227	Saccharomyces_cerevisiae
ENSSDUG00000001552	tyw1	93	71.128	ENSSBOG00000025873	-	98	66.162	Saimiri_boliviensis_boliviensis
ENSSDUG00000001552	tyw1	95	70.387	ENSSHAG00000010346	-	99	66.529	Sarcophilus_harrisii
ENSSDUG00000001552	tyw1	96	75.446	ENSSFOG00015001054	tyw1	98	72.849	Scleropages_formosus
ENSSDUG00000001552	tyw1	98	90.270	ENSSMAG00000020514	tyw1	100	89.257	Scophthalmus_maximus
ENSSDUG00000001552	tyw1	100	99.602	ENSSLDG00000003554	tyw1	100	99.602	Seriola_lalandi_dorsalis
ENSSDUG00000001552	tyw1	95	68.796	ENSSPUG00000002715	-	98	66.940	Sphenodon_punctatus
ENSSDUG00000001552	tyw1	93	71.536	ENSSSCG00000007733	-	99	68.182	Sus_scrofa
ENSSDUG00000001552	tyw1	86	69.687	ENSTGUG00000003428	-	99	67.218	Taeniopygia_guttata
ENSSDUG00000001552	tyw1	100	84.483	ENSTRUG00000016107	tyw1	98	84.483	Takifugu_rubripes
ENSSDUG00000001552	tyw1	93	86.787	ENSTNIG00000018999	tyw1	100	87.237	Tetraodon_nigroviridis
ENSSDUG00000001552	tyw1	95	72.564	ENSUMAG00000015343	-	98	67.852	Ursus_maritimus
ENSSDUG00000001552	tyw1	95	71.814	ENSVVUG00000016457	-	98	67.442	Vulpes_vulpes
ENSSDUG00000001552	tyw1	95	72.337	ENSXETG00000010094	tyw1	99	69.714	Xenopus_tropicalis
ENSSDUG00000001552	tyw1	98	84.906	ENSXMAG00000013125	tyw1	100	81.034	Xiphophorus_maculatus