EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000001575 (Gene tree)
Gene ID: 111239948
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 10968 bases
Position: chrBDQW01006988.1:203973-214940
Accession: 111239948
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002012	PARP	PF00644.20	9.1e-22	1	1
ENSSDUP00000002062	PARP	PF00644.20	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002076	-	6436	XM_022769896	ENSSDUP00000002012	1626 (aa)	XP_022625617	UPI000BBEFC19
ENSSDUT00000002125	-	1218	-	ENSSDUP00000002062	405 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000001575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000001575	-	50	34.389	ENSSDUG00000003200	parp11	71	34.513
ENSSDUG00000001575	-	78	47.291	ENSSDUG00000007576	-	99	33.659
ENSSDUG00000001575	-	78	46.829	ENSSDUG00000013560	-	90	30.979
ENSSDUG00000001575	-	77	45.813	ENSSDUG00000007589	-	92	32.039
ENSSDUG00000001575	-	62	83.255	ENSSDUG00000001451	-	72	83.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001575	-	79	34.545	ENSAPOG00000007412	-	96	49.682	Acanthochromis_polyacanthus
ENSSDUG00000001575	-	99	75.854	ENSAPOG00000021642	-	100	87.245	Acanthochromis_polyacanthus
ENSSDUG00000001575	-	79	39.692	ENSACIG00000009912	-	97	47.739	Amphilophus_citrinellus
ENSSDUG00000001575	-	99	42.308	ENSACIG00000003944	si:ch211-219a4.3	86	44.776	Amphilophus_citrinellus
ENSSDUG00000001575	-	95	42.927	ENSACIG00000004115	si:ch211-219a4.3	55	53.600	Amphilophus_citrinellus
ENSSDUG00000001575	-	91	65.972	ENSAOCG00000017389	-	95	86.500	Amphiprion_ocellaris
ENSSDUG00000001575	-	79	40.909	ENSAOCG00000002980	-	98	52.174	Amphiprion_ocellaris
ENSSDUG00000001575	-	78	42.995	ENSAPEG00000003728	-	99	33.494	Amphiprion_percula
ENSSDUG00000001575	-	78	47.783	ENSAPEG00000003700	-	93	33.333	Amphiprion_percula
ENSSDUG00000001575	-	99	85.572	ENSAPEG00000001687	-	100	89.175	Amphiprion_percula
ENSSDUG00000001575	-	79	50.000	ENSATEG00000002592	-	95	35.071	Anabas_testudineus
ENSSDUG00000001575	-	77	47.573	ENSATEG00000002598	-	97	35.144	Anabas_testudineus
ENSSDUG00000001575	-	79	47.549	ENSATEG00000002587	-	99	39.216	Anabas_testudineus
ENSSDUG00000001575	-	99	81.592	ENSATEG00000011611	-	99	70.191	Anabas_testudineus
ENSSDUG00000001575	-	77	45.813	ENSACLG00000013116	-	99	32.756	Astatotilapia_calliptera
ENSSDUG00000001575	-	78	39.222	ENSACLG00000013093	-	98	39.222	Astatotilapia_calliptera
ENSSDUG00000001575	-	78	40.099	ENSACLG00000005418	-	94	42.938	Astatotilapia_calliptera
ENSSDUG00000001575	-	99	75.622	ENSACLG00000001129	-	95	80.255	Astatotilapia_calliptera
ENSSDUG00000001575	-	89	44.828	ENSAMXG00000031852	-	99	31.370	Astyanax_mexicanus
ENSSDUG00000001575	-	88	41.290	ENSAMXG00000035876	si:cabz01030277.1	98	41.290	Astyanax_mexicanus
ENSSDUG00000001575	-	99	45.854	ENSBTAG00000016656	PARP14	84	47.980	Bos_taurus
ENSSDUG00000001575	-	99	46.154	ENSCPOG00000020020	PARP14	69	30.370	Cavia_porcellus
ENSSDUG00000001575	-	88	65.730	ENSCSEG00000020071	-	98	69.110	Cynoglossus_semilaevis
ENSSDUG00000001575	-	99	42.512	ENSCSEG00000017936	si:ch211-219a4.3	84	43.810	Cynoglossus_semilaevis
ENSSDUG00000001575	-	99	45.366	ENSCVAG00000014299	-	98	30.955	Cyprinodon_variegatus
ENSSDUG00000001575	-	100	72.772	ENSCVAG00000017536	-	100	59.963	Cyprinodon_variegatus
ENSSDUG00000001575	-	78	40.000	ENSCVAG00000014329	-	96	46.734	Cyprinodon_variegatus
ENSSDUG00000001575	-	50	72.772	ENSCVAG00000017520	-	92	71.889	Cyprinodon_variegatus
ENSSDUG00000001575	-	99	44.554	ENSDARG00000040445	si:ch211-219a4.3	99	32.081	Danio_rerio
ENSSDUG00000001575	-	92	32.575	ENSDARG00000100612	si:ch211-163c2.1	97	32.575	Danio_rerio
ENSSDUG00000001575	-	85	39.865	ENSDARG00000105415	si:ch211-163c2.1	99	33.455	Danio_rerio
ENSSDUG00000001575	-	99	32.855	ENSDARG00000099377	si:cabz01030277.1	99	34.181	Danio_rerio
ENSSDUG00000001575	-	78	32.727	ENSEBUG00000002611	-	66	44.221	Eptatretus_burgeri
ENSSDUG00000001575	-	99	41.584	ENSELUG00000009798	si:ch211-219a4.3	68	34.870	Esox_lucius
ENSSDUG00000001575	-	99	58.654	ENSELUG00000007568	-	99	48.559	Esox_lucius
ENSSDUG00000001575	-	51	49.038	ENSFHEG00000008820	-	89	50.980	Fundulus_heteroclitus
ENSSDUG00000001575	-	100	76.238	ENSFHEG00000008557	-	100	62.408	Fundulus_heteroclitus
ENSSDUG00000001575	-	99	36.279	ENSGMOG00000011231	-	98	40.171	Gadus_morhua
ENSSDUG00000001575	-	99	42.857	ENSGAFG00000009879	si:ch211-219a4.3	99	30.609	Gambusia_affinis
ENSSDUG00000001575	-	78	38.006	ENSGAFG00000002533	-	97	47.264	Gambusia_affinis
ENSSDUG00000001575	-	77	70.142	ENSGAFG00000001802	-	99	61.314	Gambusia_affinis
ENSSDUG00000001575	-	100	77.723	ENSGAFG00000001814	-	92	81.218	Gambusia_affinis
ENSSDUG00000001575	-	82	71.782	ENSGACG00000018943	-	99	62.287	Gasterosteus_aculeatus
ENSSDUG00000001575	-	99	38.537	ENSGACG00000002353	si:ch211-219a4.3	95	40.816	Gasterosteus_aculeatus
ENSSDUG00000001575	-	78	38.679	ENSHBUG00000005369	-	97	42.564	Haplochromis_burtoni
ENSSDUG00000001575	-	50	43.902	ENSHBUG00000005337	-	94	30.435	Haplochromis_burtoni
ENSSDUG00000001575	-	99	76.119	ENSHBUG00000018235	-	99	79.487	Haplochromis_burtoni
ENSSDUG00000001575	-	99	31.243	ENSIPUG00000008165	si:cabz01030277.1	99	31.243	Ictalurus_punctatus
ENSSDUG00000001575	-	99	45.161	ENSSTOG00000019423	PARP14	75	47.030	Ictidomys_tridecemlineatus
ENSSDUG00000001575	-	55	39.806	ENSKMAG00000000939	-	92	39.806	Kryptolebias_marmoratus
ENSSDUG00000001575	-	78	39.264	ENSKMAG00000003908	-	96	48.387	Kryptolebias_marmoratus
ENSSDUG00000001575	-	99	65.236	ENSKMAG00000016827	-	99	79.397	Kryptolebias_marmoratus
ENSSDUG00000001575	-	78	39.938	ENSKMAG00000012870	-	95	48.925	Kryptolebias_marmoratus
ENSSDUG00000001575	-	79	72.139	ENSLBEG00000016023	-	97	66.055	Labrus_bergylta
ENSSDUG00000001575	-	78	48.804	ENSLACG00000001018	-	99	35.612	Latimeria_chalumnae
ENSSDUG00000001575	-	99	54.902	ENSLOCG00000000942	-	99	38.782	Lepisosteus_oculatus
ENSSDUG00000001575	-	99	46.305	ENSLOCG00000000239	si:cabz01030277.1	99	35.740	Lepisosteus_oculatus
ENSSDUG00000001575	-	97	75.532	ENSMAMG00000012368	-	99	68.980	Mastacembelus_armatus
ENSSDUG00000001575	-	99	33.815	ENSMAMG00000014821	si:cabz01030277.1	99	33.682	Mastacembelus_armatus
ENSSDUG00000001575	-	77	46.305	ENSMZEG00005021082	-	99	31.868	Maylandia_zebra
ENSSDUG00000001575	-	78	31.579	ENSMZEG00005025708	-	80	44.578	Maylandia_zebra
ENSSDUG00000001575	-	78	42.500	ENSMZEG00005026601	-	89	51.000	Maylandia_zebra
ENSSDUG00000001575	-	90	47.273	ENSMZEG00005025678	si:ch211-219a4.3	93	45.771	Maylandia_zebra
ENSSDUG00000001575	-	99	75.622	ENSMZEG00005020476	-	99	65.806	Maylandia_zebra
ENSSDUG00000001575	-	50	43.750	ENSMGAG00000016901	-	99	30.899	Meleagris_gallopavo
ENSSDUG00000001575	-	99	45.098	ENSMOCG00000021121	Parp14	74	30.435	Microtus_ochrogaster
ENSSDUG00000001575	-	78	40.777	ENSMMOG00000005282	-	97	32.767	Mola_mola
ENSSDUG00000001575	-	78	37.931	ENSMMOG00000005277	-	98	31.376	Mola_mola
ENSSDUG00000001575	-	87	35.526	ENSMODG00000018308	-	74	31.373	Monodelphis_domestica
ENSSDUG00000001575	-	99	43.137	ENSMODG00000018318	-	73	37.342	Monodelphis_domestica
ENSSDUG00000001575	-	75	45.813	ENSMALG00000015837	-	99	31.119	Monopterus_albus
ENSSDUG00000001575	-	64	40.892	ENSMALG00000015864	-	99	32.347	Monopterus_albus
ENSSDUG00000001575	-	54	43.421	ENSMLUG00000027718	-	51	43.421	Myotis_lucifugus
ENSSDUG00000001575	-	64	41.132	ENSNBRG00000004017	-	90	48.187	Neolamprologus_brichardi
ENSSDUG00000001575	-	64	42.803	ENSNBRG00000003877	-	87	42.803	Neolamprologus_brichardi
ENSSDUG00000001575	-	99	67.734	ENSNBRG00000005232	-	99	78.974	Neolamprologus_brichardi
ENSSDUG00000001575	-	79	44.878	ENSOPRG00000013872	PARP14	51	39.891	Ochotona_princeps
ENSSDUG00000001575	-	79	36.119	ENSONIG00000017776	-	90	46.448	Oreochromis_niloticus
ENSSDUG00000001575	-	79	75.124	ENSONIG00000007870	-	99	65.146	Oreochromis_niloticus
ENSSDUG00000001575	-	75	49.268	ENSONIG00000012986	-	99	34.483	Oreochromis_niloticus
ENSSDUG00000001575	-	50	41.327	ENSONIG00000004517	-	99	41.327	Oreochromis_niloticus
ENSSDUG00000001575	-	77	43.069	ENSORLG00000008781	-	97	30.568	Oryzias_latipes
ENSSDUG00000001575	-	78	44.712	ENSORLG00000007845	-	91	33.701	Oryzias_latipes
ENSSDUG00000001575	-	51	46.890	ENSORLG00000026291	-	77	40.836	Oryzias_latipes
ENSSDUG00000001575	-	99	31.342	ENSORLG00020005938	-	99	31.342	Oryzias_latipes_hni
ENSSDUG00000001575	-	51	46.890	ENSORLG00020005917	-	79	40.836	Oryzias_latipes_hni
ENSSDUG00000001575	-	92	30.440	ENSORLG00015021971	si:ch211-219a4.3	88	44.828	Oryzias_latipes_hsok
ENSSDUG00000001575	-	63	44.231	ENSORLG00015003387	-	74	44.231	Oryzias_latipes_hsok
ENSSDUG00000001575	-	99	66.667	ENSOMEG00000022143	-	99	56.258	Oryzias_melastigma
ENSSDUG00000001575	-	99	44.335	ENSOMEG00000019715	si:ch211-219a4.3	93	46.000	Oryzias_melastigma
ENSSDUG00000001575	-	79	40.615	ENSOMEG00000016395	-	99	49.746	Oryzias_melastigma
ENSSDUG00000001575	-	50	49.268	ENSOMEG00000016408	-	94	43.987	Oryzias_melastigma
ENSSDUG00000001575	-	79	39.385	ENSOMEG00000016380	-	94	49.239	Oryzias_melastigma
ENSSDUG00000001575	-	79	38.838	ENSOMEG00000016369	-	95	50.267	Oryzias_melastigma
ENSSDUG00000001575	-	78	41.102	ENSPKIG00000004027	-	99	30.381	Paramormyrops_kingsleyae
ENSSDUG00000001575	-	99	59.113	ENSPKIG00000022431	-	100	41.505	Paramormyrops_kingsleyae
ENSSDUG00000001575	-	50	42.647	ENSPKIG00000004135	-	88	35.443	Paramormyrops_kingsleyae
ENSSDUG00000001575	-	50	41.667	ENSPMGG00000007159	-	98	30.114	Periophthalmus_magnuspinnatus
ENSSDUG00000001575	-	50	39.423	ENSPMGG00000017987	-	90	41.624	Periophthalmus_magnuspinnatus
ENSSDUG00000001575	-	88	54.795	ENSPMGG00000004482	-	96	60.914	Periophthalmus_magnuspinnatus
ENSSDUG00000001575	-	78	40.175	ENSPMAG00000008296	-	95	42.929	Petromyzon_marinus
ENSSDUG00000001575	-	99	43.350	ENSPFOG00000016743	si:ch211-219a4.3	76	48.555	Poecilia_formosa
ENSSDUG00000001575	-	99	76.733	ENSPFOG00000000012	-	100	61.444	Poecilia_formosa
ENSSDUG00000001575	-	92	69.417	ENSPFOG00000023812	-	99	59.854	Poecilia_formosa
ENSSDUG00000001575	-	50	43.350	ENSPFOG00000021893	-	82	35.938	Poecilia_formosa
ENSSDUG00000001575	-	99	46.341	ENSPFOG00000005470	-	99	30.930	Poecilia_formosa
ENSSDUG00000001575	-	99	32.158	ENSPFOG00000024351	-	98	32.158	Poecilia_formosa
ENSSDUG00000001575	-	99	30.769	ENSPLAG00000004367	-	83	41.830	Poecilia_latipinna
ENSSDUG00000001575	-	62	41.016	ENSPLAG00000004362	-	87	46.561	Poecilia_latipinna
ENSSDUG00000001575	-	54	66.818	ENSPLAG00000023515	-	90	60.526	Poecilia_latipinna
ENSSDUG00000001575	-	99	30.977	ENSPMEG00000012541	-	83	42.157	Poecilia_mexicana
ENSSDUG00000001575	-	54	66.818	ENSPMEG00000004356	-	90	60.526	Poecilia_mexicana
ENSSDUG00000001575	-	99	77.228	ENSPMEG00000004328	-	96	75.701	Poecilia_mexicana
ENSSDUG00000001575	-	51	58.696	ENSPREG00000019182	-	51	56.818	Poecilia_reticulata
ENSSDUG00000001575	-	78	41.872	ENSPREG00000019242	-	99	31.337	Poecilia_reticulata
ENSSDUG00000001575	-	78	39.130	ENSPREG00000003560	-	95	48.241	Poecilia_reticulata
ENSSDUG00000001575	-	77	58.255	ENSPREG00000007470	-	98	73.196	Poecilia_reticulata
ENSSDUG00000001575	-	99	77.228	ENSPREG00000007508	-	99	76.000	Poecilia_reticulata
ENSSDUG00000001575	-	79	43.069	ENSPVAG00000012722	PARP14	77	43.069	Pteropus_vampyrus
ENSSDUG00000001575	-	78	37.618	ENSPNYG00000001714	-	91	44.633	Pundamilia_nyererei
ENSSDUG00000001575	-	78	43.902	ENSPNYG00000013937	-	93	45.771	Pundamilia_nyererei
ENSSDUG00000001575	-	78	42.188	ENSPNYG00000021378	-	89	50.500	Pundamilia_nyererei
ENSSDUG00000001575	-	78	38.580	ENSPNYG00000021303	-	97	45.274	Pundamilia_nyererei
ENSSDUG00000001575	-	61	42.308	ENSPNAG00000020642	-	99	31.655	Pygocentrus_nattereri
ENSSDUG00000001575	-	99	44.053	ENSSBOG00000032798	PARP14	82	30.781	Saimiri_boliviensis_boliviensis
ENSSDUG00000001575	-	99	44.390	ENSSHAG00000002478	PARP14	82	44.444	Sarcophilus_harrisii
ENSSDUG00000001575	-	60	40.000	ENSSFOG00015012771	-	99	30.743	Scleropages_formosus
ENSSDUG00000001575	-	95	51.538	ENSSFOG00015012828	-	92	60.204	Scleropages_formosus
ENSSDUG00000001575	-	78	42.857	ENSSFOG00015001605	-	89	46.584	Scleropages_formosus
ENSSDUG00000001575	-	100	96.620	ENSSLDG00000005702	-	100	96.620	Seriola_lalandi_dorsalis
ENSSDUG00000001575	-	76	47.059	ENSSPAG00000004771	-	95	32.304	Stegastes_partitus
ENSSDUG00000001575	-	100	83.663	ENSSPAG00000023229	-	99	68.157	Stegastes_partitus
ENSSDUG00000001575	-	99	32.423	ENSSPAG00000004785	-	99	32.420	Stegastes_partitus
ENSSDUG00000001575	-	76	40.394	ENSTRUG00000004579	-	89	43.878	Takifugu_rubripes
ENSSDUG00000001575	-	50	42.365	ENSTRUG00000004556	-	73	38.750	Takifugu_rubripes
ENSSDUG00000001575	-	78	37.624	ENSTNIG00000008883	-	87	39.487	Tetraodon_nigroviridis
ENSSDUG00000001575	-	81	40.059	ENSUAMG00000004120	-	92	45.500	Ursus_americanus
ENSSDUG00000001575	-	99	44.608	ENSVPAG00000002158	PARP14	73	46.701	Vicugna_pacos
ENSSDUG00000001575	-	99	44.144	ENSVVUG00000022533	PARP14	75	40.217	Vulpes_vulpes
ENSSDUG00000001575	-	51	44.498	ENSXETG00000010161	parp14.3	99	30.019	Xenopus_tropicalis
ENSSDUG00000001575	-	77	44.279	ENSXETG00000023400	-	78	46.392	Xenopus_tropicalis
ENSSDUG00000001575	-	73	34.091	ENSXETG00000031130	-	98	34.091	Xenopus_tropicalis
ENSSDUG00000001575	-	77	35.398	ENSXETG00000004526	-	92	38.974	Xenopus_tropicalis
ENSSDUG00000001575	-	78	41.872	ENSXCOG00000014707	-	89	46.087	Xiphophorus_couchianus
ENSSDUG00000001575	-	82	54.902	ENSXCOG00000006581	-	99	67.337	Xiphophorus_couchianus
ENSSDUG00000001575	-	77	70.616	ENSXMAG00000024189	-	99	61.314	Xiphophorus_maculatus
ENSSDUG00000001575	-	99	33.262	ENSXMAG00000027110	-	83	41.176	Xiphophorus_maculatus
ENSSDUG00000001575	-	77	45.588	ENSXMAG00000001866	-	96	34.615	Xiphophorus_maculatus
ENSSDUG00000001575	-	99	76.847	ENSXMAG00000016244	-	99	60.381	Xiphophorus_maculatus