EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001651 (Gene tree)
Gene ID: 111237195
Gene Symbol: rpp38
Alias: fc10d08|wu:fc10d08|zgc:92924
Full Name: ribonuclease P/MRP subunit p38
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 804 bases
Position: chrBDQW01000814.1:220787-221590
Accession: 111237195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002103	Ribosomal_L7Ae	PF01248.26	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002166	-	804	XM_022766188	ENSSDUP00000002103	267 (aa)	XP_022621909	UPI000BBE7C0C

Gene Model

Click here to download ENSSDUG00000001651's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG
sdu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001651's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001651	rpp38	98	43.110	ENSG00000152464	RPP38	99	45.181	Homo_sapiens
ENSSDUG00000001651	rpp38	96	69.004	ENSAPOG00000001240	rpp38	95	67.897	Acanthochromis_polyacanthus
ENSSDUG00000001651	rpp38	98	43.214	ENSAMEG00000018832	RPP38	94	42.960	Ailuropoda_melanoleuca
ENSSDUG00000001651	rpp38	96	73.034	ENSACIG00000011592	rpp38	96	75.655	Amphilophus_citrinellus
ENSSDUG00000001651	rpp38	96	67.018	ENSAOCG00000017293	rpp38	95	65.845	Amphiprion_ocellaris
ENSSDUG00000001651	rpp38	96	70.522	ENSAPEG00000002315	rpp38	95	68.657	Amphiprion_percula
ENSSDUG00000001651	rpp38	100	77.778	ENSATEG00000000731	rpp38	96	76.538	Anabas_testudineus
ENSSDUG00000001651	rpp38	89	44.444	ENSAPLG00000002054	RPP38	88	43.254	Anas_platyrhynchos
ENSSDUG00000001651	rpp38	96	75.486	ENSACLG00000016962	rpp38	95	76.265	Astatotilapia_calliptera
ENSSDUG00000001651	rpp38	96	75.486	ENSACLG00000016958	rpp38	95	76.265	Astatotilapia_calliptera
ENSSDUG00000001651	rpp38	96	47.287	ENSAMXG00000025023	rpp38	93	46.899	Astyanax_mexicanus
ENSSDUG00000001651	rpp38	98	42.349	ENSBTAG00000007702	RPP38	94	41.516	Bos_taurus
ENSSDUG00000001651	rpp38	98	45.714	ENSCAFG00000024373	RPP38	94	44.238	Canis_familiaris
ENSSDUG00000001651	rpp38	98	45.714	ENSCAFG00020008008	RPP38	94	44.238	Canis_lupus_dingo
ENSSDUG00000001651	rpp38	98	41.993	ENSCHIG00000012484	RPP38	94	41.155	Capra_hircus
ENSSDUG00000001651	rpp38	93	45.896	ENSCPOG00000003981	RPP38	89	44.528	Cavia_porcellus
ENSSDUG00000001651	rpp38	98	43.262	ENSCLAG00000010194	RPP38	94	44.727	Chinchilla_lanigera
ENSSDUG00000001651	rpp38	95	44.485	ENSCSAG00000019055	RPP38	94	44.203	Chlorocebus_sabaeus
ENSSDUG00000001651	rpp38	98	42.908	ENSCHOG00000004335	RPP38	94	42.238	Choloepus_hoffmanni
ENSSDUG00000001651	rpp38	98	43.223	ENSCGRG00001001395	Rpp38	94	43.382	Cricetulus_griseus_chok1gshd
ENSSDUG00000001651	rpp38	98	43.223	ENSCGRG00000017441	Rpp38	94	43.382	Cricetulus_griseus_crigri
ENSSDUG00000001651	rpp38	96	68.582	ENSCSEG00000001721	rpp38	96	67.954	Cynoglossus_semilaevis
ENSSDUG00000001651	rpp38	96	62.500	ENSCVAG00000001676	rpp38	95	62.132	Cyprinodon_variegatus
ENSSDUG00000001651	rpp38	92	50.980	ENSDARG00000040350	rpp38	94	49.813	Danio_rerio
ENSSDUG00000001651	rpp38	98	41.667	ENSDNOG00000040314	RPP38	94	40.141	Dasypus_novemcinctus
ENSSDUG00000001651	rpp38	97	43.590	ENSDORG00000009783	Rpp38	93	44.061	Dipodomys_ordii
ENSSDUG00000001651	rpp38	98	41.935	ENSETEG00000002839	RPP38	94	42.491	Echinops_telfairi
ENSSDUG00000001651	rpp38	98	42.294	ENSEASG00005019783	RPP38	93	41.135	Equus_asinus_asinus
ENSSDUG00000001651	rpp38	93	40.602	ENSEEUG00000014677	RPP38	89	41.791	Erinaceus_europaeus
ENSSDUG00000001651	rpp38	96	53.979	ENSELUG00000010160	rpp38	96	52.595	Esox_lucius
ENSSDUG00000001651	rpp38	98	43.214	ENSFCAG00000022449	RPP38	94	42.754	Felis_catus
ENSSDUG00000001651	rpp38	90	43.254	ENSFALG00000014804	RPP38	86	41.833	Ficedula_albicollis
ENSSDUG00000001651	rpp38	98	41.901	ENSFDAG00000018669	RPP38	94	40.959	Fukomys_damarensis
ENSSDUG00000001651	rpp38	96	64.260	ENSFHEG00000013741	rpp38	95	64.130	Fundulus_heteroclitus
ENSSDUG00000001651	rpp38	90	46.245	ENSGALG00000008794	RPP38	84	43.874	Gallus_gallus
ENSSDUG00000001651	rpp38	59	78.125	ENSGACG00000009258	rpp38	99	78.125	Gasterosteus_aculeatus
ENSSDUG00000001651	rpp38	96	75.875	ENSHBUG00000010937	rpp38	95	76.654	Haplochromis_burtoni
ENSSDUG00000001651	rpp38	98	42.908	ENSHGLG00000012144	RPP38	94	41.455	Heterocephalus_glaber_female
ENSSDUG00000001651	rpp38	96	49.416	ENSIPUG00000022879	rpp38	94	48.450	Ictalurus_punctatus
ENSSDUG00000001651	rpp38	98	43.110	ENSSTOG00000025699	RPP38	92	42.294	Ictidomys_tridecemlineatus
ENSSDUG00000001651	rpp38	98	44.326	ENSJJAG00000007523	Rpp38	94	44.404	Jaculus_jaculus
ENSSDUG00000001651	rpp38	92	64.202	ENSKMAG00000003986	rpp38	89	62.835	Kryptolebias_marmoratus
ENSSDUG00000001651	rpp38	100	70.652	ENSLBEG00000006853	rpp38	96	70.566	Labrus_bergylta
ENSSDUG00000001651	rpp38	97	42.958	ENSLACG00000006502	RPP38	95	42.958	Latimeria_chalumnae
ENSSDUG00000001651	rpp38	100	47.331	ENSLOCG00000018347	rpp38	93	45.387	Lepisosteus_oculatus
ENSSDUG00000001651	rpp38	93	44.569	ENSLAFG00000000509	RPP38	89	43.893	Loxodonta_africana
ENSSDUG00000001651	rpp38	95	43.382	ENSMMUG00000007679	RPP38	94	43.841	Macaca_mulatta
ENSSDUG00000001651	rpp38	99	80.377	ENSMAMG00000012774	rpp38	95	80.156	Mastacembelus_armatus
ENSSDUG00000001651	rpp38	96	76.265	ENSMZEG00005003189	rpp38	95	77.043	Maylandia_zebra
ENSSDUG00000001651	rpp38	96	75.486	ENSMZEG00005003200	rpp38	95	76.265	Maylandia_zebra
ENSSDUG00000001651	rpp38	90	45.669	ENSMGAG00000008217	RPP38	84	43.651	Meleagris_gallopavo
ENSSDUG00000001651	rpp38	98	43.682	ENSMAUG00000003644	Rpp38	94	43.015	Mesocricetus_auratus
ENSSDUG00000001651	rpp38	98	41.958	ENSMOCG00000007020	Rpp38	94	42.182	Microtus_ochrogaster
ENSSDUG00000001651	rpp38	99	69.030	ENSMMOG00000003446	rpp38	95	70.115	Mola_mola
ENSSDUG00000001651	rpp38	91	44.402	ENSMODG00000024091	RPP38	90	42.857	Monodelphis_domestica
ENSSDUG00000001651	rpp38	95	76.226	ENSMALG00000002356	rpp38	93	75.194	Monopterus_albus
ENSSDUG00000001651	rpp38	98	45.324	MGP_CAROLIEiJ_G0023133	Rpp38	94	45.487	Mus_caroli
ENSSDUG00000001651	rpp38	98	43.416	ENSMUSG00000049950	Rpp38	94	44.404	Mus_musculus
ENSSDUG00000001651	rpp38	98	45.683	MGP_PahariEiJ_G0019193	Rpp38	94	45.055	Mus_pahari
ENSSDUG00000001651	rpp38	98	43.431	MGP_SPRETEiJ_G0024051	Rpp38	94	44.404	Mus_spretus
ENSSDUG00000001651	rpp38	98	42.958	ENSMPUG00000018523	RPP38	94	43.682	Mustela_putorius_furo
ENSSDUG00000001651	rpp38	95	42.066	ENSMLUG00000002153	RPP38	94	43.116	Myotis_lucifugus
ENSSDUG00000001651	rpp38	98	44.718	ENSNGAG00000011066	Rpp38	94	44.565	Nannospalax_galili
ENSSDUG00000001651	rpp38	96	72.093	ENSNBRG00000006994	rpp38	96	75.969	Neolamprologus_brichardi
ENSSDUG00000001651	rpp38	96	75.194	ENSONIG00000020467	rpp38	94	75.581	Oreochromis_niloticus
ENSSDUG00000001651	rpp38	95	41.971	ENSOCUG00000022768	-	94	43.173	Oryctolagus_cuniculus
ENSSDUG00000001651	rpp38	95	42.701	ENSOCUG00000024367	-	94	43.911	Oryctolagus_cuniculus
ENSSDUG00000001651	rpp38	96	66.667	ENSORLG00000009219	rpp38	95	65.779	Oryzias_latipes
ENSSDUG00000001651	rpp38	96	66.415	ENSORLG00020011503	rpp38	92	65.530	Oryzias_latipes_hni
ENSSDUG00000001651	rpp38	96	66.415	ENSORLG00015017702	rpp38	92	65.530	Oryzias_latipes_hsok
ENSSDUG00000001651	rpp38	91	64.800	ENSOMEG00000005414	rpp38	95	64.286	Oryzias_melastigma
ENSSDUG00000001651	rpp38	98	44.366	ENSOGAG00000008059	RPP38	95	44.765	Otolemur_garnettii
ENSSDUG00000001651	rpp38	98	42.349	ENSOARG00000004534	RPP38	94	41.516	Ovis_aries
ENSSDUG00000001651	rpp38	98	44.170	ENSPPAG00000041577	RPP38	86	42.545	Pan_paniscus
ENSSDUG00000001651	rpp38	98	43.571	ENSPPRG00000015329	RPP38	94	42.754	Panthera_pardus
ENSSDUG00000001651	rpp38	98	43.571	ENSPTIG00000007188	RPP38	94	42.754	Panthera_tigris_altaica
ENSSDUG00000001651	rpp38	98	44.170	ENSPTRG00000002318	RPP38	86	42.545	Pan_troglodytes
ENSSDUG00000001651	rpp38	93	48.289	ENSPKIG00000025652	rpp38	93	47.778	Paramormyrops_kingsleyae
ENSSDUG00000001651	rpp38	93	44.151	ENSPSIG00000001527	RPP38	90	43.511	Pelodiscus_sinensis
ENSSDUG00000001651	rpp38	98	44.245	ENSPEMG00000008375	Rpp38	94	43.956	Peromyscus_maniculatus_bairdii
ENSSDUG00000001651	rpp38	93	45.318	ENSPCIG00000009096	RPP38	85	45.038	Phascolarctos_cinereus
ENSSDUG00000001651	rpp38	75	62.319	ENSPFOG00000016823	rpp38	94	62.626	Poecilia_formosa
ENSSDUG00000001651	rpp38	99	59.786	ENSPLAG00000007626	rpp38	96	59.191	Poecilia_latipinna
ENSSDUG00000001651	rpp38	96	56.015	ENSPMEG00000020392	rpp38	96	55.263	Poecilia_mexicana
ENSSDUG00000001651	rpp38	94	61.798	ENSPREG00000017744	rpp38	92	61.240	Poecilia_reticulata
ENSSDUG00000001651	rpp38	98	43.110	ENSPPYG00000002113	RPP38	94	42.182	Pongo_abelii
ENSSDUG00000001651	rpp38	95	43.015	ENSPVAG00000007155	RPP38	94	42.960	Pteropus_vampyrus
ENSSDUG00000001651	rpp38	96	75.875	ENSPNYG00000004293	rpp38	95	76.654	Pundamilia_nyererei
ENSSDUG00000001651	rpp38	91	49.383	ENSPNAG00000010633	rpp38	94	49.615	Pygocentrus_nattereri
ENSSDUG00000001651	rpp38	98	46.442	ENSRNOG00000038025	Rpp38	94	46.183	Rattus_norvegicus
ENSSDUG00000001651	rpp38	93	43.233	ENSSHAG00000015529	RPP38	90	43.411	Sarcophilus_harrisii
ENSSDUG00000001651	rpp38	96	75.385	ENSSMAG00000018276	rpp38	91	74.400	Scophthalmus_maximus
ENSSDUG00000001651	rpp38	100	95.911	ENSSLDG00000014355	rpp38	100	95.911	Seriola_lalandi_dorsalis
ENSSDUG00000001651	rpp38	98	39.483	ENSSARG00000012099	RPP38	93	37.218	Sorex_araneus
ENSSDUG00000001651	rpp38	96	41.818	ENSSPUG00000008560	-	93	41.199	Sphenodon_punctatus
ENSSDUG00000001651	rpp38	98	44.245	ENSSPUG00000018363	-	95	43.382	Sphenodon_punctatus
ENSSDUG00000001651	rpp38	93	44.737	ENSSPUG00000005237	-	89	43.359	Sphenodon_punctatus
ENSSDUG00000001651	rpp38	96	67.939	ENSSPAG00000020387	rpp38	95	65.517	Stegastes_partitus
ENSSDUG00000001651	rpp38	98	42.254	ENSSSCG00000027110	RPP38	94	41.489	Sus_scrofa
ENSSDUG00000001651	rpp38	89	42.745	ENSTGUG00000001366	RPP38	89	41.176	Taeniopygia_guttata
ENSSDUG00000001651	rpp38	99	65.441	ENSTNIG00000001334	rpp38	96	66.412	Tetraodon_nigroviridis
ENSSDUG00000001651	rpp38	98	42.254	ENSTTRG00000004420	RPP38	94	41.281	Tursiops_truncatus
ENSSDUG00000001651	rpp38	98	43.929	ENSUAMG00000002618	RPP38	94	44.043	Ursus_americanus
ENSSDUG00000001651	rpp38	98	44.128	ENSUMAG00000012382	RPP38	94	42.806	Ursus_maritimus
ENSSDUG00000001651	rpp38	98	45.161	ENSVVUG00000005272	RPP38	94	44.526	Vulpes_vulpes
ENSSDUG00000001651	rpp38	91	43.462	ENSXETG00000003419	rpp38	90	43.462	Xenopus_tropicalis