EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001683 (Gene tree)
Gene ID: 111223268
Gene Symbol: trit1
Alias: si:ch211-194e15.1
Full Name: tRNA isopentenyltransferase 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 42498 bases
Position: chrBDQW01000110.1:421188-463685
Accession: 111223268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002166	zf-met	PF12874.7	0.00032	1	1
ENSSDUP00000002166	IPPT	PF01715.17	5.1e-66	1	1
ENSSDUP00000002166	zf-C2H2_jaz	PF12171.8	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002229	-	1551	XM_022747351	ENSSDUP00000002166	482 (aa)	XP_022603072	UPI000BBE6E5C

Gene Model

Click here to download ENSSDUG00000001683's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001683	trit1	85	62.439	ENSG00000043514	TRIT1	99	62.791	Homo_sapiens
ENSSDUG00000001683	trit1	96	84.483	ENSAPOG00000020918	trit1	100	84.483	Acanthochromis_polyacanthus
ENSSDUG00000001683	trit1	85	61.707	ENSAMEG00000004342	TRIT1	91	60.093	Ailuropoda_melanoleuca
ENSSDUG00000001683	trit1	98	80.672	ENSACIG00000017409	trit1	99	80.882	Amphilophus_citrinellus
ENSSDUG00000001683	trit1	100	85.950	ENSAOCG00000009850	trit1	100	85.950	Amphiprion_ocellaris
ENSSDUG00000001683	trit1	100	86.157	ENSAPEG00000001481	trit1	100	86.157	Amphiprion_percula
ENSSDUG00000001683	trit1	100	85.979	ENSATEG00000005426	trit1	100	85.979	Anabas_testudineus
ENSSDUG00000001683	trit1	68	53.333	ENSAPLG00000011421	TRIT1	94	53.333	Anas_platyrhynchos
ENSSDUG00000001683	trit1	89	60.465	ENSACAG00000002280	TRIT1	83	62.077	Anolis_carolinensis
ENSSDUG00000001683	trit1	85	61.707	ENSANAG00000030732	TRIT1	90	59.490	Aotus_nancymaae
ENSSDUG00000001683	trit1	100	83.058	ENSACLG00000004920	trit1	100	83.058	Astatotilapia_calliptera
ENSSDUG00000001683	trit1	90	70.208	ENSAMXG00000010959	trit1	95	70.208	Astyanax_mexicanus
ENSSDUG00000001683	trit1	85	61.463	ENSBTAG00000013832	TRIT1	91	59.584	Bos_taurus
ENSSDUG00000001683	trit1	82	37.129	WBGene00001740	gro-1	94	37.002	Caenorhabditis_elegans
ENSSDUG00000001683	trit1	85	62.195	ENSCJAG00000002620	TRIT1	90	63.692	Callithrix_jacchus
ENSSDUG00000001683	trit1	85	61.557	ENSCAFG00000003048	TRIT1	87	61.557	Canis_familiaris
ENSSDUG00000001683	trit1	85	59.906	ENSCAFG00020003875	TRIT1	92	60.938	Canis_lupus_dingo
ENSSDUG00000001683	trit1	85	61.005	ENSCHIG00000013259	TRIT1	91	59.184	Capra_hircus
ENSSDUG00000001683	trit1	84	62.408	ENSTSYG00000004363	TRIT1	86	62.408	Carlito_syrichta
ENSSDUG00000001683	trit1	76	54.076	ENSCAPG00000017001	TRIT1	92	54.076	Cavia_aperea
ENSSDUG00000001683	trit1	95	57.484	ENSCPOG00000012820	TRIT1	99	56.632	Cavia_porcellus
ENSSDUG00000001683	trit1	85	61.707	ENSCCAG00000031271	TRIT1	94	60.894	Cebus_capucinus
ENSSDUG00000001683	trit1	85	58.596	ENSCATG00000034344	TRIT1	90	64.062	Cercocebus_atys
ENSSDUG00000001683	trit1	89	59.404	ENSCLAG00000009828	TRIT1	95	58.444	Chinchilla_lanigera
ENSSDUG00000001683	trit1	85	58.049	ENSCSAG00000001137	TRIT1	97	58.049	Chlorocebus_sabaeus
ENSSDUG00000001683	trit1	90	60.230	ENSCHOG00000000435	TRIT1	92	60.230	Choloepus_hoffmanni
ENSSDUG00000001683	trit1	85	45.455	ENSCSAVG00000002050	-	91	45.455	Ciona_savignyi
ENSSDUG00000001683	trit1	92	59.193	ENSCANG00000043008	TRIT1	90	64.062	Colobus_angolensis_palliatus
ENSSDUG00000001683	trit1	96	58.190	ENSCGRG00001001894	Trit1	99	57.322	Cricetulus_griseus_chok1gshd
ENSSDUG00000001683	trit1	91	55.455	ENSCGRG00000007059	Trit1	96	55.455	Cricetulus_griseus_crigri
ENSSDUG00000001683	trit1	86	84.337	ENSCSEG00000009574	trit1	97	81.579	Cynoglossus_semilaevis
ENSSDUG00000001683	trit1	91	69.021	ENSDARG00000032876	trit1	99	70.659	Danio_rerio
ENSSDUG00000001683	trit1	85	54.777	ENSDNOG00000001994	TRIT1	88	54.777	Dasypus_novemcinctus
ENSSDUG00000001683	trit1	85	55.448	ENSDORG00000012449	Trit1	89	55.448	Dipodomys_ordii
ENSSDUG00000001683	trit1	85	40.367	FBgn0043799	CG31381	90	40.367	Drosophila_melanogaster
ENSSDUG00000001683	trit1	84	61.017	ENSETEG00000008733	TRIT1	99	59.953	Echinops_telfairi
ENSSDUG00000001683	trit1	86	56.595	ENSEBUG00000012845	trit1	92	56.595	Eptatretus_burgeri
ENSSDUG00000001683	trit1	85	60.526	ENSECAG00000010597	TRIT1	80	60.526	Equus_caballus
ENSSDUG00000001683	trit1	71	55.814	ENSEEUG00000009269	TRIT1	75	55.182	Erinaceus_europaeus
ENSSDUG00000001683	trit1	98	64.990	ENSELUG00000017278	trit1	99	64.990	Esox_lucius
ENSSDUG00000001683	trit1	90	59.722	ENSFCAG00000006029	TRIT1	94	58.575	Felis_catus
ENSSDUG00000001683	trit1	78	61.600	ENSFALG00000000532	TRIT1	98	59.045	Ficedula_albicollis
ENSSDUG00000001683	trit1	84	59.905	ENSFDAG00000003098	TRIT1	92	59.905	Fukomys_damarensis
ENSSDUG00000001683	trit1	70	76.119	ENSFHEG00000022274	trit1	99	76.119	Fundulus_heteroclitus
ENSSDUG00000001683	trit1	89	79.350	ENSGMOG00000006522	trit1	100	79.350	Gadus_morhua
ENSSDUG00000001683	trit1	90	59.584	ENSGALG00000003851	TRIT1	94	59.584	Gallus_gallus
ENSSDUG00000001683	trit1	73	78.348	ENSGAFG00000018636	trit1	93	79.070	Gambusia_affinis
ENSSDUG00000001683	trit1	89	82.569	ENSGACG00000008493	trit1	100	82.569	Gasterosteus_aculeatus
ENSSDUG00000001683	trit1	78	61.702	ENSGAGG00000000522	TRIT1	92	61.702	Gopherus_agassizii
ENSSDUG00000001683	trit1	85	62.439	ENSGGOG00000010070	TRIT1	89	63.950	Gorilla_gorilla
ENSSDUG00000001683	trit1	100	83.471	ENSHBUG00000018999	trit1	100	83.471	Haplochromis_burtoni
ENSSDUG00000001683	trit1	84	55.774	ENSHGLG00000009564	-	87	55.774	Heterocephalus_glaber_female
ENSSDUG00000001683	trit1	84	61.179	ENSHGLG00000010308	-	92	59.535	Heterocephalus_glaber_female
ENSSDUG00000001683	trit1	77	46.505	ENSHGLG00100018159	-	94	46.505	Heterocephalus_glaber_male
ENSSDUG00000001683	trit1	84	61.179	ENSHGLG00100015382	-	92	59.535	Heterocephalus_glaber_male
ENSSDUG00000001683	trit1	85	75.644	ENSHCOG00000006755	trit1	100	68.559	Hippocampus_comes
ENSSDUG00000001683	trit1	95	67.826	ENSIPUG00000021822	trit1	95	67.826	Ictalurus_punctatus
ENSSDUG00000001683	trit1	90	58.796	ENSSTOG00000006446	TRIT1	88	58.796	Ictidomys_tridecemlineatus
ENSSDUG00000001683	trit1	92	53.587	ENSJJAG00000000300	-	91	54.713	Jaculus_jaculus
ENSSDUG00000001683	trit1	92	55.756	ENSJJAG00000000316	-	95	55.756	Jaculus_jaculus
ENSSDUG00000001683	trit1	100	77.893	ENSKMAG00000021788	trit1	99	77.893	Kryptolebias_marmoratus
ENSSDUG00000001683	trit1	100	83.162	ENSLBEG00000024262	trit1	100	83.162	Labrus_bergylta
ENSSDUG00000001683	trit1	89	63.889	ENSLACG00000013861	TRIT1	87	63.889	Latimeria_chalumnae
ENSSDUG00000001683	trit1	89	69.213	ENSLOCG00000002057	trit1	95	67.035	Lepisosteus_oculatus
ENSSDUG00000001683	trit1	89	59.813	ENSLAFG00000016876	TRIT1	90	59.813	Loxodonta_africana
ENSSDUG00000001683	trit1	85	62.195	ENSMFAG00000001316	TRIT1	90	64.062	Macaca_fascicularis
ENSSDUG00000001683	trit1	85	62.195	ENSMMUG00000016220	TRIT1	90	64.062	Macaca_mulatta
ENSSDUG00000001683	trit1	85	62.195	ENSMNEG00000023137	TRIT1	90	64.062	Macaca_nemestrina
ENSSDUG00000001683	trit1	85	62.195	ENSMLEG00000035296	TRIT1	90	64.062	Mandrillus_leucophaeus
ENSSDUG00000001683	trit1	100	85.270	ENSMAMG00000005868	trit1	100	85.124	Mastacembelus_armatus
ENSSDUG00000001683	trit1	100	83.058	ENSMZEG00005011506	trit1	100	83.058	Maylandia_zebra
ENSSDUG00000001683	trit1	78	60.533	ENSMGAG00000005516	TRIT1	99	60.533	Meleagris_gallopavo
ENSSDUG00000001683	trit1	94	58.242	ENSMAUG00000000399	Trit1	99	56.695	Mesocricetus_auratus
ENSSDUG00000001683	trit1	87	61.575	ENSMICG00000016294	TRIT1	88	61.575	Microcebus_murinus
ENSSDUG00000001683	trit1	86	60.656	ENSMOCG00000008173	Trit1	95	59.111	Microtus_ochrogaster
ENSSDUG00000001683	trit1	91	76.136	ENSMMOG00000021140	trit1	98	76.136	Mola_mola
ENSSDUG00000001683	trit1	86	60.238	ENSMODG00000017650	TRIT1	91	60.238	Monodelphis_domestica
ENSSDUG00000001683	trit1	98	82.983	ENSMALG00000017843	trit1	99	83.193	Monopterus_albus
ENSSDUG00000001683	trit1	90	60.648	MGP_CAROLIEiJ_G0026428	Trit1	94	59.641	Mus_caroli
ENSSDUG00000001683	trit1	87	62.291	ENSMUSG00000028653	Trit1	91	61.201	Mus_musculus
ENSSDUG00000001683	trit1	87	62.530	MGP_PahariEiJ_G0028758	Trit1	91	61.432	Mus_pahari
ENSSDUG00000001683	trit1	87	62.053	MGP_SPRETEiJ_G0027408	Trit1	91	60.970	Mus_spretus
ENSSDUG00000001683	trit1	85	62.044	ENSMPUG00000014291	TRIT1	91	60.185	Mustela_putorius_furo
ENSSDUG00000001683	trit1	85	60.000	ENSMLUG00000000334	TRIT1	87	60.000	Myotis_lucifugus
ENSSDUG00000001683	trit1	85	62.439	ENSNLEG00000012038	TRIT1	90	64.062	Nomascus_leucogenys
ENSSDUG00000001683	trit1	90	53.687	ENSMEUG00000005217	TRIT1	78	71.545	Notamacropus_eugenii
ENSSDUG00000001683	trit1	59	53.614	ENSOPRG00000003205	-	60	53.614	Ochotona_princeps
ENSSDUG00000001683	trit1	90	58.028	ENSODEG00000006117	TRIT1	91	58.756	Octodon_degus
ENSSDUG00000001683	trit1	97	83.824	ENSONIG00000015407	trit1	99	83.824	Oreochromis_niloticus
ENSSDUG00000001683	trit1	78	59.467	ENSOANG00000002779	TRIT1	97	58.869	Ornithorhynchus_anatinus
ENSSDUG00000001683	trit1	93	58.889	ENSOCUG00000002054	TRIT1	94	58.889	Oryctolagus_cuniculus
ENSSDUG00000001683	trit1	100	74.689	ENSORLG00000005802	trit1	100	74.689	Oryzias_latipes
ENSSDUG00000001683	trit1	100	74.587	ENSORLG00020005519	trit1	100	74.587	Oryzias_latipes_hni
ENSSDUG00000001683	trit1	100	74.174	ENSORLG00015018715	trit1	100	74.174	Oryzias_latipes_hsok
ENSSDUG00000001683	trit1	100	73.444	ENSOMEG00000006569	trit1	98	73.237	Oryzias_melastigma
ENSSDUG00000001683	trit1	87	61.190	ENSOGAG00000009571	TRIT1	88	61.098	Otolemur_garnettii
ENSSDUG00000001683	trit1	85	62.019	ENSOARG00000020140	TRIT1	87	62.019	Ovis_aries
ENSSDUG00000001683	trit1	85	62.439	ENSPPAG00000023930	TRIT1	90	64.062	Pan_paniscus
ENSSDUG00000001683	trit1	90	59.259	ENSPPRG00000009680	TRIT1	92	59.633	Panthera_pardus
ENSSDUG00000001683	trit1	90	59.259	ENSPTIG00000021134	TRIT1	92	59.633	Panthera_tigris_altaica
ENSSDUG00000001683	trit1	85	62.439	ENSPTRG00000000579	TRIT1	90	64.062	Pan_troglodytes
ENSSDUG00000001683	trit1	85	61.951	ENSPANG00000018125	TRIT1	90	63.750	Papio_anubis
ENSSDUG00000001683	trit1	79	66.667	ENSPKIG00000024527	trit1	97	66.667	Paramormyrops_kingsleyae
ENSSDUG00000001683	trit1	75	46.556	ENSPSIG00000017073	TRIT1	99	46.556	Pelodiscus_sinensis
ENSSDUG00000001683	trit1	86	73.141	ENSPMGG00000018445	trit1	99	73.861	Periophthalmus_magnuspinnatus
ENSSDUG00000001683	trit1	90	59.862	ENSPEMG00000022418	Trit1	91	59.862	Peromyscus_maniculatus_bairdii
ENSSDUG00000001683	trit1	78	58.225	ENSPMAG00000008892	trit1	98	57.360	Petromyzon_marinus
ENSSDUG00000001683	trit1	88	61.827	ENSPCIG00000020666	TRIT1	98	62.682	Phascolarctos_cinereus
ENSSDUG00000001683	trit1	99	78.870	ENSPFOG00000014626	trit1	98	78.870	Poecilia_formosa
ENSSDUG00000001683	trit1	70	81.493	ENSPLAG00000011669	trit1	97	80.000	Poecilia_latipinna
ENSSDUG00000001683	trit1	54	79.231	ENSPMEG00000023788	trit1	93	79.231	Poecilia_mexicana
ENSSDUG00000001683	trit1	70	80.896	ENSPREG00000018182	trit1	93	79.403	Poecilia_reticulata
ENSSDUG00000001683	trit1	85	62.683	ENSPPYG00000001499	TRIT1	87	62.683	Pongo_abelii
ENSSDUG00000001683	trit1	68	49.848	ENSPCAG00000014680	TRIT1	90	49.848	Procavia_capensis
ENSSDUG00000001683	trit1	85	61.951	ENSPCOG00000014150	TRIT1	86	61.951	Propithecus_coquereli
ENSSDUG00000001683	trit1	85	54.878	ENSPVAG00000003344	TRIT1	76	74.775	Pteropus_vampyrus
ENSSDUG00000001683	trit1	64	86.408	ENSPNYG00000001003	trit1	100	86.408	Pundamilia_nyererei
ENSSDUG00000001683	trit1	89	69.697	ENSPNAG00000009466	trit1	93	70.620	Pygocentrus_nattereri
ENSSDUG00000001683	trit1	85	61.321	ENSRNOG00000014274	Trit1	87	61.321	Rattus_norvegicus
ENSSDUG00000001683	trit1	92	58.744	ENSRBIG00000043179	TRIT1	90	63.750	Rhinopithecus_bieti
ENSSDUG00000001683	trit1	92	58.744	ENSRROG00000042670	TRIT1	90	63.750	Rhinopithecus_roxellana
ENSSDUG00000001683	trit1	86	31.555	YOR274W	-	94	31.555	Saccharomyces_cerevisiae
ENSSDUG00000001683	trit1	92	58.239	ENSSBOG00000024417	TRIT1	90	64.465	Saimiri_boliviensis_boliviensis
ENSSDUG00000001683	trit1	83	57.320	ENSSHAG00000018363	TRIT1	94	57.320	Sarcophilus_harrisii
ENSSDUG00000001683	trit1	92	67.188	ENSSFOG00015007284	trit1	87	67.188	Scleropages_formosus
ENSSDUG00000001683	trit1	100	85.950	ENSSMAG00000020730	trit1	100	85.950	Scophthalmus_maximus
ENSSDUG00000001683	trit1	100	98.755	ENSSLDG00000008379	trit1	100	98.755	Seriola_lalandi_dorsalis
ENSSDUG00000001683	trit1	94	57.849	ENSSARG00000004540	TRIT1	96	57.849	Sorex_araneus
ENSSDUG00000001683	trit1	78	60.053	ENSSPUG00000003472	TRIT1	77	60.053	Sphenodon_punctatus
ENSSDUG00000001683	trit1	85	87.835	ENSSPAG00000020745	trit1	91	87.835	Stegastes_partitus
ENSSDUG00000001683	trit1	78	57.937	ENSTGUG00000001242	TRIT1	99	57.937	Taeniopygia_guttata
ENSSDUG00000001683	trit1	100	79.132	ENSTRUG00000013936	trit1	100	79.132	Takifugu_rubripes
ENSSDUG00000001683	trit1	94	76.652	ENSTNIG00000009240	trit1	96	79.080	Tetraodon_nigroviridis
ENSSDUG00000001683	trit1	72	76.829	ENSTBEG00000001317	TRIT1	68	76.829	Tupaia_belangeri
ENSSDUG00000001683	trit1	87	60.382	ENSTTRG00000005064	TRIT1	88	60.382	Tursiops_truncatus
ENSSDUG00000001683	trit1	52	62.948	ENSUAMG00000000522	-	98	60.294	Ursus_americanus
ENSSDUG00000001683	trit1	85	62.439	ENSUMAG00000017299	TRIT1	82	60.789	Ursus_maritimus
ENSSDUG00000001683	trit1	85	57.073	ENSVPAG00000003008	TRIT1	91	55.427	Vicugna_pacos
ENSSDUG00000001683	trit1	91	59.732	ENSXETG00000010952	trit1	97	58.772	Xenopus_tropicalis
ENSSDUG00000001683	trit1	70	81.493	ENSXMAG00000016302	trit1	91	80.000	Xiphophorus_maculatus