EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001782 (Gene tree)
Gene ID: 111223086
Gene Symbol: yars
Alias: TyrRS|cb204|wu:fk52b08
Full Name: tyrosyl-tRNA synthetase
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3458 bases
Position: chrBDQW01000110.1:519289-522746
Accession: 111223086
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002319	tRNA_bind	PF01588.20	3.5e-30	1	1
ENSSDUP00000002319	tRNA-synt_1b	PF00579.25	4.5e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002384	-	1593	XM_022747112	ENSSDUP00000002319	530 (aa)	XP_022602833	-

Gene Model

Click here to download ENSSDUG00000001782's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001782's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001782	yars	100	79.245	ENSG00000134684	YARS	100	79.057	Homo_sapiens
ENSSDUG00000001782	yars	100	92.871	ENSAPOG00000020788	yars	100	91.932	Acanthochromis_polyacanthus
ENSSDUG00000001782	yars	100	80.189	ENSAMEG00000007476	YARS	100	80.000	Ailuropoda_melanoleuca
ENSSDUG00000001782	yars	100	92.830	ENSACIG00000017504	yars	100	92.830	Amphilophus_citrinellus
ENSSDUG00000001782	yars	100	92.322	ENSAOCG00000009987	yars	100	92.135	Amphiprion_ocellaris
ENSSDUG00000001782	yars	100	92.322	ENSAPEG00000001273	yars	100	92.135	Amphiprion_percula
ENSSDUG00000001782	yars	100	92.135	ENSATEG00000005301	yars	100	92.322	Anabas_testudineus
ENSSDUG00000001782	yars	98	73.614	ENSAPLG00000005739	YARS	98	74.131	Anas_platyrhynchos
ENSSDUG00000001782	yars	99	77.316	ENSACAG00000003568	YARS	99	77.127	Anolis_carolinensis
ENSSDUG00000001782	yars	100	79.434	ENSANAG00000034533	YARS	100	79.245	Aotus_nancymaae
ENSSDUG00000001782	yars	100	90.189	ENSACLG00000004618	yars	100	91.321	Astatotilapia_calliptera
ENSSDUG00000001782	yars	100	87.736	ENSAMXG00000010993	yars	100	87.736	Astyanax_mexicanus
ENSSDUG00000001782	yars	100	79.245	ENSBTAG00000018065	YARS	100	79.057	Bos_taurus
ENSSDUG00000001782	yars	100	79.245	ENSCJAG00000001037	YARS	100	79.057	Callithrix_jacchus
ENSSDUG00000001782	yars	100	79.434	ENSCAFG00000010481	YARS	94	79.245	Canis_familiaris
ENSSDUG00000001782	yars	100	79.623	ENSCAFG00020025379	YARS	100	79.434	Canis_lupus_dingo
ENSSDUG00000001782	yars	100	79.434	ENSCHIG00000014340	YARS	100	79.245	Capra_hircus
ENSSDUG00000001782	yars	100	79.057	ENSTSYG00000005019	YARS	100	78.868	Carlito_syrichta
ENSSDUG00000001782	yars	90	55.672	ENSCAPG00000008627	YARS	100	56.842	Cavia_aperea
ENSSDUG00000001782	yars	100	78.868	ENSCPOG00000009614	YARS	94	78.679	Cavia_porcellus
ENSSDUG00000001782	yars	100	79.245	ENSCCAG00000036757	YARS	98	79.057	Cebus_capucinus
ENSSDUG00000001782	yars	100	79.245	ENSCATG00000044394	YARS	100	79.057	Cercocebus_atys
ENSSDUG00000001782	yars	100	78.679	ENSCLAG00000008977	YARS	93	78.491	Chinchilla_lanigera
ENSSDUG00000001782	yars	100	79.057	ENSCSAG00000001062	YARS	100	78.868	Chlorocebus_sabaeus
ENSSDUG00000001782	yars	96	70.254	ENSCHOG00000003939	YARS	100	70.059	Choloepus_hoffmanni
ENSSDUG00000001782	yars	100	78.868	ENSCPBG00000010998	YARS	100	78.868	Chrysemys_picta_bellii
ENSSDUG00000001782	yars	99	71.509	ENSCING00000005113	-	99	71.698	Ciona_intestinalis
ENSSDUG00000001782	yars	99	66.792	ENSCSAVG00000003706	-	99	67.235	Ciona_savignyi
ENSSDUG00000001782	yars	100	78.868	ENSCANG00000038285	YARS	100	78.679	Colobus_angolensis_palliatus
ENSSDUG00000001782	yars	100	79.434	ENSCGRG00001010863	Yars	100	74.906	Cricetulus_griseus_chok1gshd
ENSSDUG00000001782	yars	100	79.434	ENSCGRG00000007526	Yars	94	79.245	Cricetulus_griseus_crigri
ENSSDUG00000001782	yars	100	91.698	ENSCSEG00000009643	yars	100	91.887	Cynoglossus_semilaevis
ENSSDUG00000001782	yars	100	93.208	ENSCVAG00000016583	yars	100	93.019	Cyprinodon_variegatus
ENSSDUG00000001782	yars	100	86.604	ENSDARG00000035913	yars	100	95.175	Danio_rerio
ENSSDUG00000001782	yars	100	78.868	ENSDNOG00000000536	YARS	100	78.679	Dasypus_novemcinctus
ENSSDUG00000001782	yars	100	79.811	ENSDORG00000011871	Yars	100	79.623	Dipodomys_ordii
ENSSDUG00000001782	yars	99	66.856	FBgn0027080	TyrRS	99	66.667	Drosophila_melanogaster
ENSSDUG00000001782	yars	87	88.095	ENSETEG00000000215	YARS	87	88.095	Echinops_telfairi
ENSSDUG00000001782	yars	99	65.595	ENSEBUG00000004750	yars	100	64.773	Eptatretus_burgeri
ENSSDUG00000001782	yars	99	79.429	ENSEASG00005011762	YARS	93	78.868	Equus_asinus_asinus
ENSSDUG00000001782	yars	99	79.429	ENSECAG00000010015	YARS	68	78.868	Equus_caballus
ENSSDUG00000001782	yars	88	62.304	ENSEEUG00000005992	-	73	72.517	Erinaceus_europaeus
ENSSDUG00000001782	yars	100	88.302	ENSELUG00000017171	yars	100	88.113	Esox_lucius
ENSSDUG00000001782	yars	100	66.226	ENSFCAG00000000704	YARS	100	66.038	Felis_catus
ENSSDUG00000001782	yars	98	78.736	ENSFALG00000000592	YARS	93	78.095	Ficedula_albicollis
ENSSDUG00000001782	yars	100	78.679	ENSFDAG00000006620	YARS	94	78.491	Fukomys_damarensis
ENSSDUG00000001782	yars	100	93.609	ENSFHEG00000022444	yars	100	93.045	Fundulus_heteroclitus
ENSSDUG00000001782	yars	96	85.127	ENSGMOG00000006555	yars	100	85.127	Gadus_morhua
ENSSDUG00000001782	yars	99	79.198	ENSGALG00000003563	YARS	98	78.302	Gallus_gallus
ENSSDUG00000001782	yars	100	89.642	ENSGACG00000008516	yars	100	90.019	Gasterosteus_aculeatus
ENSSDUG00000001782	yars	100	79.811	ENSGAGG00000024290	YARS	100	79.623	Gopherus_agassizii
ENSSDUG00000001782	yars	100	79.057	ENSGGOG00000014013	YARS	100	78.868	Gorilla_gorilla
ENSSDUG00000001782	yars	100	90.280	ENSHBUG00000018909	yars	100	90.093	Haplochromis_burtoni
ENSSDUG00000001782	yars	100	78.113	ENSHGLG00000013843	YARS	94	77.925	Heterocephalus_glaber_female
ENSSDUG00000001782	yars	100	77.170	ENSHGLG00100002785	-	100	76.981	Heterocephalus_glaber_male
ENSSDUG00000001782	yars	70	73.984	ENSHGLG00100020546	-	99	73.713	Heterocephalus_glaber_male
ENSSDUG00000001782	yars	100	86.322	ENSHCOG00000006672	yars	100	85.582	Hippocampus_comes
ENSSDUG00000001782	yars	99	83.176	ENSIPUG00000021749	yars	99	82.987	Ictalurus_punctatus
ENSSDUG00000001782	yars	100	80.377	ENSSTOG00000012031	YARS	94	80.377	Ictidomys_tridecemlineatus
ENSSDUG00000001782	yars	100	78.302	ENSJJAG00000013281	Yars	93	78.113	Jaculus_jaculus
ENSSDUG00000001782	yars	100	90.789	ENSKMAG00000021752	yars	100	90.789	Kryptolebias_marmoratus
ENSSDUG00000001782	yars	100	92.897	ENSLBEG00000024080	yars	100	92.336	Labrus_bergylta
ENSSDUG00000001782	yars	100	77.547	ENSLACG00000015577	YARS	100	77.358	Latimeria_chalumnae
ENSSDUG00000001782	yars	99	83.932	ENSLOCG00000002165	yars	99	83.743	Lepisosteus_oculatus
ENSSDUG00000001782	yars	100	78.679	ENSLAFG00000003786	YARS	96	78.491	Loxodonta_africana
ENSSDUG00000001782	yars	100	74.151	ENSMFAG00000040933	YARS	100	73.962	Macaca_fascicularis
ENSSDUG00000001782	yars	100	79.245	ENSMMUG00000019746	YARS	100	79.057	Macaca_mulatta
ENSSDUG00000001782	yars	100	73.134	ENSMNEG00000031865	YARS	100	72.948	Macaca_nemestrina
ENSSDUG00000001782	yars	100	79.245	ENSMLEG00000041315	YARS	100	79.057	Mandrillus_leucophaeus
ENSSDUG00000001782	yars	100	93.045	ENSMAMG00000006092	yars	100	93.045	Mastacembelus_armatus
ENSSDUG00000001782	yars	100	90.807	ENSMZEG00005011426	yars	100	89.869	Maylandia_zebra
ENSSDUG00000001782	yars	99	76.938	ENSMGAG00000005063	YARS	100	76.749	Meleagris_gallopavo
ENSSDUG00000001782	yars	97	79.806	ENSMAUG00000021126	Yars	99	79.612	Mesocricetus_auratus
ENSSDUG00000001782	yars	100	80.000	ENSMICG00000011204	YARS	100	79.811	Microcebus_murinus
ENSSDUG00000001782	yars	100	79.623	ENSMOCG00000011342	Yars	94	79.434	Microtus_ochrogaster
ENSSDUG00000001782	yars	100	87.547	ENSMMOG00000021133	yars	100	87.547	Mola_mola
ENSSDUG00000001782	yars	100	78.302	ENSMODG00000017404	YARS	100	78.113	Monodelphis_domestica
ENSSDUG00000001782	yars	63	93.373	ENSMALG00000003648	yars	90	94.225	Monopterus_albus
ENSSDUG00000001782	yars	100	79.623	MGP_CAROLIEiJ_G0026513	Yars	94	79.434	Mus_caroli
ENSSDUG00000001782	yars	100	79.623	ENSMUSG00000028811	Yars	94	79.434	Mus_musculus
ENSSDUG00000001782	yars	100	78.679	MGP_PahariEiJ_G0028844	Yars	94	78.491	Mus_pahari
ENSSDUG00000001782	yars	100	79.245	MGP_SPRETEiJ_G0027493	Yars	94	79.057	Mus_spretus
ENSSDUG00000001782	yars	100	80.000	ENSMLUG00000000759	YARS	100	79.811	Myotis_lucifugus
ENSSDUG00000001782	yars	97	79.532	ENSNGAG00000001419	Yars	100	79.452	Nannospalax_galili
ENSSDUG00000001782	yars	100	91.132	ENSNBRG00000020413	yars	100	91.887	Neolamprologus_brichardi
ENSSDUG00000001782	yars	100	79.245	ENSNLEG00000002922	YARS	100	79.057	Nomascus_leucogenys
ENSSDUG00000001782	yars	75	84.118	ENSMEUG00000011824	-	75	84.118	Notamacropus_eugenii
ENSSDUG00000001782	yars	100	74.528	ENSOPRG00000003669	YARS	100	74.340	Ochotona_princeps
ENSSDUG00000001782	yars	100	78.491	ENSODEG00000005363	YARS	94	78.302	Octodon_degus
ENSSDUG00000001782	yars	100	91.402	ENSONIG00000015400	yars	100	91.028	Oreochromis_niloticus
ENSSDUG00000001782	yars	93	74.455	ENSOANG00000011779	YARS	100	74.405	Ornithorhynchus_anatinus
ENSSDUG00000001782	yars	100	80.000	ENSOCUG00000010007	YARS	100	79.811	Oryctolagus_cuniculus
ENSSDUG00000001782	yars	98	91.810	ENSORLG00000013982	yars	96	91.238	Oryzias_latipes
ENSSDUG00000001782	yars	100	90.960	ENSORLG00020020750	yars	100	91.337	Oryzias_latipes_hni
ENSSDUG00000001782	yars	100	91.182	ENSORLG00015008963	yars	100	90.432	Oryzias_latipes_hsok
ENSSDUG00000001782	yars	100	91.525	ENSOMEG00000013016	yars	100	91.337	Oryzias_melastigma
ENSSDUG00000001782	yars	100	79.057	ENSOGAG00000007359	YARS	100	78.868	Otolemur_garnettii
ENSSDUG00000001782	yars	100	79.245	ENSOARG00000020897	YARS	93	79.057	Ovis_aries
ENSSDUG00000001782	yars	100	79.434	ENSPPAG00000035791	YARS	98	79.572	Pan_paniscus
ENSSDUG00000001782	yars	100	79.434	ENSPPRG00000023768	YARS	100	79.245	Panthera_pardus
ENSSDUG00000001782	yars	100	79.434	ENSPTIG00000003438	YARS	100	79.245	Panthera_tigris_altaica
ENSSDUG00000001782	yars	100	79.434	ENSPTRG00000000491	YARS	100	79.245	Pan_troglodytes
ENSSDUG00000001782	yars	100	79.245	ENSPANG00000009804	YARS	100	79.057	Papio_anubis
ENSSDUG00000001782	yars	100	83.774	ENSPKIG00000024596	yars	100	83.396	Paramormyrops_kingsleyae
ENSSDUG00000001782	yars	100	68.679	ENSPSIG00000006945	YARS	100	68.491	Pelodiscus_sinensis
ENSSDUG00000001782	yars	100	91.321	ENSPMGG00000022917	yars	100	91.321	Periophthalmus_magnuspinnatus
ENSSDUG00000001782	yars	100	79.057	ENSPEMG00000010746	Yars	94	78.868	Peromyscus_maniculatus_bairdii
ENSSDUG00000001782	yars	99	78.828	ENSPCIG00000022457	YARS	99	78.639	Phascolarctos_cinereus
ENSSDUG00000001782	yars	100	90.038	ENSPFOG00000014808	yars	100	90.226	Poecilia_formosa
ENSSDUG00000001782	yars	100	90.414	ENSPLAG00000020075	yars	100	90.602	Poecilia_latipinna
ENSSDUG00000001782	yars	100	90.226	ENSPMEG00000002803	yars	100	90.414	Poecilia_mexicana
ENSSDUG00000001782	yars	100	90.755	ENSPREG00000018280	yars	100	90.755	Poecilia_reticulata
ENSSDUG00000001782	yars	100	77.111	ENSPPYG00000001585	YARS	100	76.923	Pongo_abelii
ENSSDUG00000001782	yars	76	76.179	ENSPCAG00000011170	YARS	76	75.931	Procavia_capensis
ENSSDUG00000001782	yars	100	79.434	ENSPCOG00000021026	YARS	100	79.245	Propithecus_coquereli
ENSSDUG00000001782	yars	100	78.868	ENSPVAG00000010984	YARS	100	78.679	Pteropus_vampyrus
ENSSDUG00000001782	yars	100	90.566	ENSPNYG00000000860	yars	100	91.321	Pundamilia_nyererei
ENSSDUG00000001782	yars	100	87.170	ENSPNAG00000009622	yars	100	86.981	Pygocentrus_nattereri
ENSSDUG00000001782	yars	100	79.811	ENSRNOG00000007213	Yars	94	79.623	Rattus_norvegicus
ENSSDUG00000001782	yars	54	67.708	ENSRBIG00000044271	-	83	69.176	Rhinopithecus_bieti
ENSSDUG00000001782	yars	100	79.057	ENSRROG00000039913	YARS	100	78.868	Rhinopithecus_roxellana
ENSSDUG00000001782	yars	100	79.057	ENSSBOG00000030205	YARS	100	78.868	Saimiri_boliviensis_boliviensis
ENSSDUG00000001782	yars	100	78.491	ENSSHAG00000011851	YARS	100	78.491	Sarcophilus_harrisii
ENSSDUG00000001782	yars	100	84.717	ENSSFOG00015007179	yars	100	84.528	Scleropages_formosus
ENSSDUG00000001782	yars	100	89.623	ENSSMAG00000020736	yars	100	89.623	Scophthalmus_maximus
ENSSDUG00000001782	yars	100	98.679	ENSSLDG00000008268	yars	100	98.679	Seriola_lalandi_dorsalis
ENSSDUG00000001782	yars	85	74.265	ENSSARG00000012227	-	83	74.265	Sorex_araneus
ENSSDUG00000001782	yars	100	79.623	ENSSPUG00000000333	YARS	100	79.623	Sphenodon_punctatus
ENSSDUG00000001782	yars	100	91.386	ENSSPAG00000020632	yars	100	87.030	Stegastes_partitus
ENSSDUG00000001782	yars	100	80.189	ENSSSCG00000030369	YARS	100	80.000	Sus_scrofa
ENSSDUG00000001782	yars	99	78.817	ENSTGUG00000001342	YARS	99	78.435	Taeniopygia_guttata
ENSSDUG00000001782	yars	99	89.603	ENSTRUG00000014099	yars	99	89.603	Takifugu_rubripes
ENSSDUG00000001782	yars	99	88.847	ENSTNIG00000009237	yars	99	88.091	Tetraodon_nigroviridis
ENSSDUG00000001782	yars	96	71.820	ENSTBEG00000014374	YARS	100	71.820	Tupaia_belangeri
ENSSDUG00000001782	yars	100	78.679	ENSTTRG00000014987	YARS	100	78.491	Tursiops_truncatus
ENSSDUG00000001782	yars	100	76.981	ENSUAMG00000000392	YARS	100	74.340	Ursus_americanus
ENSSDUG00000001782	yars	100	72.761	ENSUMAG00000008312	YARS	93	72.388	Ursus_maritimus
ENSSDUG00000001782	yars	100	69.680	ENSVPAG00000010958	YARS	100	69.680	Vicugna_pacos
ENSSDUG00000001782	yars	100	79.434	ENSVVUG00000015468	YARS	99	79.532	Vulpes_vulpes
ENSSDUG00000001782	yars	100	74.528	ENSXETG00000027865	yars	100	74.340	Xenopus_tropicalis
ENSSDUG00000001782	yars	95	90.060	ENSXMAG00000016348	yars	82	90.258	Xiphophorus_maculatus