EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000001800 (Gene tree)
Gene ID: 111237398
Gene Symbol: pum2
Alias: si:ch1073-351m12.1
Full Name: pumilio RNA binding family member 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 13646 bases
Position: chrBDQW01000025.1:15857013-15870658
Accession: 111237398
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	1	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	2	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	3	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	4	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	5	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	6	7
ENSSDUP00000002345	PUF	PF00806.19	6.5e-70	7	7

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002410	-	3282	XM_022766486	ENSSDUP00000002345	1093 (aa)	XP_022622207	-

Gene Model

Click here to download ENSSDUG00000001800's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001800's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000001800	pum2	55	78.195	ENSSDUG00000009021	pum1	88	65.982

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001800	pum2	87	77.113	ENSG00000055917	PUM2	94	74.227	Homo_sapiens
ENSSDUG00000001800	pum2	87	77.010	ENSAMEG00000002823	PUM2	89	74.457	Ailuropoda_melanoleuca
ENSSDUG00000001800	pum2	89	99.790	ENSACIG00000010646	pum2	93	99.790	Amphilophus_citrinellus
ENSSDUG00000001800	pum2	98	95.714	ENSAOCG00000016619	pum2	96	95.714	Amphiprion_ocellaris
ENSSDUG00000001800	pum2	100	95.714	ENSAPEG00000019924	pum2	97	95.714	Amphiprion_percula
ENSSDUG00000001800	pum2	99	95.684	ENSATEG00000015030	pum2	97	95.000	Anabas_testudineus
ENSSDUG00000001800	pum2	100	75.407	ENSAPLG00000010496	PUM2	93	72.589	Anas_platyrhynchos
ENSSDUG00000001800	pum2	89	75.607	ENSACAG00000010491	PUM2	91	71.992	Anolis_carolinensis
ENSSDUG00000001800	pum2	87	77.629	ENSANAG00000021807	PUM2	90	74.536	Aotus_nancymaae
ENSSDUG00000001800	pum2	100	93.571	ENSACLG00000022532	pum2	97	93.571	Astatotilapia_calliptera
ENSSDUG00000001800	pum2	87	76.701	ENSBTAG00000011155	PUM2	94	74.147	Bos_taurus
ENSSDUG00000001800	pum2	87	77.526	ENSCJAG00000007450	PUM2	90	74.433	Callithrix_jacchus
ENSSDUG00000001800	pum2	87	76.701	ENSCAFG00000003839	PUM2	89	74.043	Canis_familiaris
ENSSDUG00000001800	pum2	87	76.907	ENSCAFG00020025689	PUM2	91	73.389	Canis_lupus_dingo
ENSSDUG00000001800	pum2	87	76.907	ENSCHIG00000022180	PUM2	89	74.354	Capra_hircus
ENSSDUG00000001800	pum2	87	76.622	ENSTSYG00000014463	PUM2	90	74.793	Carlito_syrichta
ENSSDUG00000001800	pum2	87	87.952	ENSCAPG00000016888	PUM2	91	85.412	Cavia_aperea
ENSSDUG00000001800	pum2	87	77.320	ENSCPOG00000031996	PUM2	89	74.330	Cavia_porcellus
ENSSDUG00000001800	pum2	87	77.423	ENSCCAG00000037035	PUM2	89	74.330	Cebus_capucinus
ENSSDUG00000001800	pum2	87	77.423	ENSCATG00000043826	PUM2	89	74.330	Cercocebus_atys
ENSSDUG00000001800	pum2	87	76.495	ENSCLAG00000006048	PUM2	89	74.021	Chinchilla_lanigera
ENSSDUG00000001800	pum2	87	77.423	ENSCSAG00000008087	PUM2	89	74.330	Chlorocebus_sabaeus
ENSSDUG00000001800	pum2	67	69.054	ENSCHOG00000004575	PUM2	69	68.598	Choloepus_hoffmanni
ENSSDUG00000001800	pum2	90	90.268	ENSCPBG00000019966	PUM2	91	90.268	Chrysemys_picta_bellii
ENSSDUG00000001800	pum2	87	77.526	ENSCANG00000032797	PUM2	89	74.433	Colobus_angolensis_palliatus
ENSSDUG00000001800	pum2	87	77.320	ENSCGRG00001025023	Pum2	89	74.124	Cricetulus_griseus_chok1gshd
ENSSDUG00000001800	pum2	87	77.526	ENSCGRG00000001580	Pum2	89	74.330	Cricetulus_griseus_crigri
ENSSDUG00000001800	pum2	100	89.286	ENSCSEG00000020899	pum2	97	89.286	Cynoglossus_semilaevis
ENSSDUG00000001800	pum2	99	94.322	ENSCVAG00000002426	pum2	92	90.743	Cyprinodon_variegatus
ENSSDUG00000001800	pum2	100	89.583	ENSDARG00000061040	pum2	92	88.542	Danio_rerio
ENSSDUG00000001800	pum2	87	73.560	ENSDNOG00000006733	PUM2	89	70.915	Dasypus_novemcinctus
ENSSDUG00000001800	pum2	87	77.034	ENSDORG00000011453	Pum2	93	73.429	Dipodomys_ordii
ENSSDUG00000001800	pum2	79	90.747	ENSETEG00000017683	PUM2	72	90.747	Echinops_telfairi
ENSSDUG00000001800	pum2	87	59.548	ENSEBUG00000004435	pum2	90	57.851	Eptatretus_burgeri
ENSSDUG00000001800	pum2	68	61.567	ENSEBUG00000014828	pum2	92	59.125	Eptatretus_burgeri
ENSSDUG00000001800	pum2	87	76.495	ENSEASG00005009429	PUM2	89	74.043	Equus_asinus_asinus
ENSSDUG00000001800	pum2	87	76.495	ENSECAG00000021930	PUM2	94	74.043	Equus_caballus
ENSSDUG00000001800	pum2	69	63.889	ENSEEUG00000003224	-	69	63.134	Erinaceus_europaeus
ENSSDUG00000001800	pum2	99	89.572	ENSELUG00000014997	pum2	92	89.362	Esox_lucius
ENSSDUG00000001800	pum2	87	76.598	ENSFCAG00000027520	PUM2	89	73.940	Felis_catus
ENSSDUG00000001800	pum2	89	75.430	ENSFALG00000001759	PUM2	90	72.525	Ficedula_albicollis
ENSSDUG00000001800	pum2	87	76.701	ENSFDAG00000019685	PUM2	89	73.944	Fukomys_damarensis
ENSSDUG00000001800	pum2	99	92.355	ENSFHEG00000021596	pum2	92	91.429	Fundulus_heteroclitus
ENSSDUG00000001800	pum2	88	86.728	ENSGMOG00000006903	pum2	95	81.958	Gadus_morhua
ENSSDUG00000001800	pum2	79	90.511	ENSGALG00000016481	PUM2	83	90.511	Gallus_gallus
ENSSDUG00000001800	pum2	100	96.246	ENSGAFG00000013691	pum2	92	96.246	Gambusia_affinis
ENSSDUG00000001800	pum2	87	91.327	ENSGACG00000009670	pum2	95	86.583	Gasterosteus_aculeatus
ENSSDUG00000001800	pum2	100	75.531	ENSGAGG00000020698	PUM2	91	72.424	Gopherus_agassizii
ENSSDUG00000001800	pum2	87	77.320	ENSGGOG00000011374	PUM2	89	74.227	Gorilla_gorilla
ENSSDUG00000001800	pum2	100	94.937	ENSHBUG00000016453	pum2	96	90.833	Haplochromis_burtoni
ENSSDUG00000001800	pum2	87	76.392	ENSHGLG00000007892	PUM2	89	72.990	Heterocephalus_glaber_female
ENSSDUG00000001800	pum2	87	76.313	ENSHGLG00100015510	PUM2	89	73.841	Heterocephalus_glaber_male
ENSSDUG00000001800	pum2	99	94.632	ENSHCOG00000010119	pum2	97	90.000	Hippocampus_comes
ENSSDUG00000001800	pum2	87	76.883	ENSSTOG00000006262	PUM2	89	74.587	Ictidomys_tridecemlineatus
ENSSDUG00000001800	pum2	87	77.240	ENSJJAG00000020969	Pum2	89	74.433	Jaculus_jaculus
ENSSDUG00000001800	pum2	100	91.650	ENSKMAG00000017216	pum2	97	90.714	Kryptolebias_marmoratus
ENSSDUG00000001800	pum2	99	95.158	ENSLBEG00000020488	pum2	96	95.000	Labrus_bergylta
ENSSDUG00000001800	pum2	100	76.107	ENSLACG00000008723	PUM2	92	74.074	Latimeria_chalumnae
ENSSDUG00000001800	pum2	100	80.311	ENSLOCG00000017196	pum2	92	77.226	Lepisosteus_oculatus
ENSSDUG00000001800	pum2	87	76.519	ENSLAFG00000009278	PUM2	89	73.299	Loxodonta_africana
ENSSDUG00000001800	pum2	87	77.423	ENSMFAG00000000492	PUM2	89	74.330	Macaca_fascicularis
ENSSDUG00000001800	pum2	87	77.423	ENSMMUG00000023181	PUM2	89	74.330	Macaca_mulatta
ENSSDUG00000001800	pum2	87	77.423	ENSMNEG00000039659	PUM2	89	74.330	Macaca_nemestrina
ENSSDUG00000001800	pum2	87	77.423	ENSMLEG00000039243	PUM2	89	74.330	Mandrillus_leucophaeus
ENSSDUG00000001800	pum2	100	96.429	ENSMAMG00000006121	pum2	97	96.429	Mastacembelus_armatus
ENSSDUG00000001800	pum2	100	93.571	ENSMZEG00005000791	pum2	97	93.571	Maylandia_zebra
ENSSDUG00000001800	pum2	89	75.101	ENSMGAG00000014040	PUM2	90	72.194	Meleagris_gallopavo
ENSSDUG00000001800	pum2	87	77.629	ENSMAUG00000000311	Pum2	89	74.433	Mesocricetus_auratus
ENSSDUG00000001800	pum2	87	77.446	ENSMICG00000011647	PUM2	90	74.330	Microcebus_murinus
ENSSDUG00000001800	pum2	87	77.549	ENSMOCG00000013663	Pum2	89	74.690	Microtus_ochrogaster
ENSSDUG00000001800	pum2	93	87.572	ENSMMOG00000002975	pum2	95	87.946	Mola_mola
ENSSDUG00000001800	pum2	87	75.334	ENSMODG00000009811	PUM2	89	72.251	Monodelphis_domestica
ENSSDUG00000001800	pum2	87	77.263	MGP_CAROLIEiJ_G0017603	Pum2	99	76.046	Mus_caroli
ENSSDUG00000001800	pum2	87	77.137	ENSMUSG00000020594	Pum2	98	75.665	Mus_musculus
ENSSDUG00000001800	pum2	87	77.446	MGP_PahariEiJ_G0029361	Pum2	99	76.046	Mus_pahari
ENSSDUG00000001800	pum2	87	77.240	MGP_SPRETEiJ_G0018447	Pum2	99	75.665	Mus_spretus
ENSSDUG00000001800	pum2	87	76.907	ENSMPUG00000013734	PUM2	89	74.250	Mustela_putorius_furo
ENSSDUG00000001800	pum2	87	76.132	ENSMLUG00000007362	PUM2	89	73.581	Myotis_lucifugus
ENSSDUG00000001800	pum2	84	53.598	ENSNGAG00000016239	-	86	51.609	Nannospalax_galili
ENSSDUG00000001800	pum2	87	77.240	ENSNGAG00000016665	-	89	74.483	Nannospalax_galili
ENSSDUG00000001800	pum2	87	77.526	ENSNLEG00000002509	PUM2	89	74.227	Nomascus_leucogenys
ENSSDUG00000001800	pum2	81	72.601	ENSMEUG00000016567	PUM2	89	63.992	Notamacropus_eugenii
ENSSDUG00000001800	pum2	65	69.890	ENSOPRG00000001963	PUM2	79	60.727	Ochotona_princeps
ENSSDUG00000001800	pum2	87	77.137	ENSODEG00000007823	PUM2	89	74.380	Octodon_degus
ENSSDUG00000001800	pum2	100	94.286	ENSONIG00000006119	pum2	97	94.286	Oreochromis_niloticus
ENSSDUG00000001800	pum2	87	76.931	ENSOCUG00000017908	PUM2	89	73.608	Oryctolagus_cuniculus
ENSSDUG00000001800	pum2	100	87.160	ENSORLG00000012611	pum2	97	87.451	Oryzias_latipes
ENSSDUG00000001800	pum2	100	91.858	ENSORLG00020014452	pum2	92	92.171	Oryzias_latipes_hni
ENSSDUG00000001800	pum2	100	91.962	ENSORLG00015009427	pum2	92	92.276	Oryzias_latipes_hsok
ENSSDUG00000001800	pum2	87	76.543	ENSOARG00000017236	PUM2	89	73.994	Ovis_aries
ENSSDUG00000001800	pum2	87	77.320	ENSPPAG00000023095	PUM2	89	74.227	Pan_paniscus
ENSSDUG00000001800	pum2	87	76.598	ENSPPRG00000021443	PUM2	94	73.940	Panthera_pardus
ENSSDUG00000001800	pum2	87	76.598	ENSPTIG00000018982	PUM2	89	73.940	Panthera_tigris_altaica
ENSSDUG00000001800	pum2	87	77.320	ENSPTRG00000011692	PUM2	89	74.227	Pan_troglodytes
ENSSDUG00000001800	pum2	87	66.286	ENSPANG00000009393	PUM2	100	85.915	Papio_anubis
ENSSDUG00000001800	pum2	100	75.430	ENSPSIG00000011626	PUM2	92	72.626	Pelodiscus_sinensis
ENSSDUG00000001800	pum2	87	77.010	ENSPEMG00000008357	Pum2	89	73.814	Peromyscus_maniculatus_bairdii
ENSSDUG00000001800	pum2	87	61.421	ENSPMAG00000007038	pum2	89	58.350	Petromyzon_marinus
ENSSDUG00000001800	pum2	87	74.051	ENSPCIG00000022139	PUM2	90	69.347	Phascolarctos_cinereus
ENSSDUG00000001800	pum2	100	94.201	ENSPFOG00000019208	pum2	92	94.201	Poecilia_formosa
ENSSDUG00000001800	pum2	100	96.559	ENSPLAG00000001826	pum2	92	96.559	Poecilia_latipinna
ENSSDUG00000001800	pum2	100	96.559	ENSPMEG00000015766	pum2	100	95.978	Poecilia_mexicana
ENSSDUG00000001800	pum2	87	77.526	ENSPPYG00000012617	PUM2	89	74.433	Pongo_abelii
ENSSDUG00000001800	pum2	60	89.130	ENSPCAG00000008001	PUM2	56	89.130	Procavia_capensis
ENSSDUG00000001800	pum2	87	77.629	ENSPCOG00000019636	PUM2	90	74.536	Propithecus_coquereli
ENSSDUG00000001800	pum2	87	71.340	ENSPVAG00000002920	PUM2	90	68.769	Pteropus_vampyrus
ENSSDUG00000001800	pum2	100	92.857	ENSPNYG00000022901	pum2	97	92.857	Pundamilia_nyererei
ENSSDUG00000001800	pum2	97	91.040	ENSPNAG00000008025	pum2	91	89.869	Pygocentrus_nattereri
ENSSDUG00000001800	pum2	87	75.489	ENSRNOG00000006180	Pum2	89	73.608	Rattus_norvegicus
ENSSDUG00000001800	pum2	87	77.732	ENSRBIG00000044880	PUM2	94	74.433	Rhinopithecus_bieti
ENSSDUG00000001800	pum2	87	77.732	ENSSBOG00000022007	PUM2	90	74.742	Saimiri_boliviensis_boliviensis
ENSSDUG00000001800	pum2	87	71.996	ENSSHAG00000002778	PUM2	90	68.657	Sarcophilus_harrisii
ENSSDUG00000001800	pum2	100	76.106	ENSSFOG00015003476	pum2	100	75.333	Scleropages_formosus
ENSSDUG00000001800	pum2	99	94.538	ENSSMAG00000018236	pum2	97	92.857	Scophthalmus_maximus
ENSSDUG00000001800	pum2	100	97.857	ENSSLDG00000000981	pum2	97	97.857	Seriola_lalandi_dorsalis
ENSSDUG00000001800	pum2	83	66.453	ENSSARG00000010992	PUM2	74	65.424	Sorex_araneus
ENSSDUG00000001800	pum2	87	77.090	ENSSPUG00000017012	PUM2	90	73.891	Sphenodon_punctatus
ENSSDUG00000001800	pum2	99	97.368	ENSSPAG00000022948	pum2	97	95.000	Stegastes_partitus
ENSSDUG00000001800	pum2	87	75.979	ENSSSCG00000008600	PUM2	94	73.526	Sus_scrofa
ENSSDUG00000001800	pum2	89	75.329	ENSTGUG00000013149	PUM2	90	72.424	Taeniopygia_guttata
ENSSDUG00000001800	pum2	100	88.571	ENSTRUG00000018167	pum2	97	88.571	Takifugu_rubripes
ENSSDUG00000001800	pum2	100	91.549	ENSTNIG00000003116	pum2	97	91.549	Tetraodon_nigroviridis
ENSSDUG00000001800	pum2	71	89.095	ENSTBEG00000008729	PUM2	72	86.071	Tupaia_belangeri
ENSSDUG00000001800	pum2	87	76.495	ENSTTRG00000004887	PUM2	89	73.837	Tursiops_truncatus
ENSSDUG00000001800	pum2	70	80.463	ENSUAMG00000008120	PUM2	97	77.649	Ursus_americanus
ENSSDUG00000001800	pum2	87	76.907	ENSUMAG00000023198	PUM2	89	74.250	Ursus_maritimus
ENSSDUG00000001800	pum2	87	76.622	ENSVPAG00000005056	PUM2	89	73.967	Vicugna_pacos
ENSSDUG00000001800	pum2	87	76.804	ENSVVUG00000014829	PUM2	90	74.147	Vulpes_vulpes
ENSSDUG00000001800	pum2	100	71.325	ENSXETG00000008903	pum2	93	68.427	Xenopus_tropicalis
ENSSDUG00000001800	pum2	100	95.795	ENSXCOG00000002556	pum2	100	95.795	Xiphophorus_couchianus
ENSSDUG00000001800	pum2	100	96.350	ENSXMAG00000017682	pum2	92	96.350	Xiphophorus_maculatus