EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001828 (Gene tree)
Gene ID: 111233167
Gene Symbol: -
Alias: fc54c06|wu:fc54c06|zgc:56062
Full Name: serum response factor binding protein 1
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 1888 bases
Position: chrBDQW01000378.1:1167403-1169290
Accession: 111233167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002346	BUD22	PF09073.10	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002411	-	1725	XM_022760923	ENSSDUP00000002346	574 (aa)	XP_022616644	UPI000BBEFDE0

Gene Model

Click here to download ENSSDUG00000001828's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001828's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001828	-	86	37.087	ENSG00000151304	SRFBP1	99	37.282	Homo_sapiens
ENSSDUG00000001828	-	100	60.708	ENSAPOG00000021469	-	86	66.214	Acanthochromis_polyacanthus
ENSSDUG00000001828	-	84	36.600	ENSAMEG00000018050	SRFBP1	98	35.953	Ailuropoda_melanoleuca
ENSSDUG00000001828	-	73	79.630	ENSACIG00000019127	-	99	56.823	Amphilophus_citrinellus
ENSSDUG00000001828	-	90	63.277	ENSAOCG00000002182	-	89	65.299	Amphiprion_ocellaris
ENSSDUG00000001828	-	92	62.132	ENSAPEG00000003041	-	90	64.366	Amphiprion_percula
ENSSDUG00000001828	-	90	69.508	ENSATEG00000007289	-	90	69.549	Anabas_testudineus
ENSSDUG00000001828	-	85	37.945	ENSACAG00000003779	SRFBP1	99	37.500	Anolis_carolinensis
ENSSDUG00000001828	-	85	37.773	ENSANAG00000022485	SRFBP1	73	76.667	Aotus_nancymaae
ENSSDUG00000001828	-	87	59.619	ENSACLG00000013909	-	93	59.398	Astatotilapia_calliptera
ENSSDUG00000001828	-	71	58.537	ENSAMXG00000040976	srfbp1	53	58.537	Astyanax_mexicanus
ENSSDUG00000001828	-	59	62.295	ENSBTAG00000014320	SRFBP1	91	61.905	Bos_taurus
ENSSDUG00000001828	-	85	38.659	ENSCJAG00000017177	SRFBP1	89	76.667	Callithrix_jacchus
ENSSDUG00000001828	-	86	37.924	ENSCAFG00000000512	SRFBP1	99	37.897	Canis_familiaris
ENSSDUG00000001828	-	86	37.924	ENSCAFG00020009389	SRFBP1	99	37.897	Canis_lupus_dingo
ENSSDUG00000001828	-	84	37.924	ENSTSYG00000008630	-	98	35.471	Carlito_syrichta
ENSSDUG00000001828	-	85	38.340	ENSCCAG00000032237	-	99	38.039	Cebus_capucinus
ENSSDUG00000001828	-	86	37.109	ENSCATG00000040904	SRFBP1	91	65.789	Cercocebus_atys
ENSSDUG00000001828	-	64	39.541	ENSCSAG00000014636	SRFBP1	67	44.984	Chlorocebus_sabaeus
ENSSDUG00000001828	-	87	37.853	ENSCGRG00001000718	Srfbp1	99	37.782	Cricetulus_griseus_chok1gshd
ENSSDUG00000001828	-	83	37.849	ENSCGRG00000010837	Srfbp1	100	36.595	Cricetulus_griseus_crigri
ENSSDUG00000001828	-	76	90.698	ENSCSEG00000011789	-	83	92.857	Cynoglossus_semilaevis
ENSSDUG00000001828	-	70	76.923	ENSCVAG00000013010	-	97	76.923	Cyprinodon_variegatus
ENSSDUG00000001828	-	72	60.938	ENSDARG00000075323	srfbp1	70	60.938	Danio_rerio
ENSSDUG00000001828	-	70	30.892	ENSDNOG00000017733	SRFBP1	69	65.789	Dasypus_novemcinctus
ENSSDUG00000001828	-	70	30.024	ENSETEG00000012408	SRFBP1	91	69.697	Echinops_telfairi
ENSSDUG00000001828	-	61	43.200	ENSEBUG00000007806	SRFBP1	58	43.200	Eptatretus_burgeri
ENSSDUG00000001828	-	86	37.573	ENSEASG00005012421	SRFBP1	99	38.824	Equus_asinus_asinus
ENSSDUG00000001828	-	86	37.251	ENSECAG00000015330	SRFBP1	99	38.235	Equus_caballus
ENSSDUG00000001828	-	86	35.490	ENSEEUG00000011514	SRFBP1	99	35.756	Erinaceus_europaeus
ENSSDUG00000001828	-	69	83.721	ENSELUG00000018381	-	97	43.023	Esox_lucius
ENSSDUG00000001828	-	71	65.789	ENSFCAG00000035118	SRFBP1	92	65.789	Felis_catus
ENSSDUG00000001828	-	85	35.771	ENSFDAG00000005102	SRFBP1	72	80.000	Fukomys_damarensis
ENSSDUG00000001828	-	87	55.192	ENSFHEG00000000477	-	90	55.243	Fundulus_heteroclitus
ENSSDUG00000001828	-	70	75.758	ENSGALG00000005316	SRFBP1	89	75.758	Gallus_gallus
ENSSDUG00000001828	-	87	54.653	ENSGAFG00000018777	-	92	54.373	Gambusia_affinis
ENSSDUG00000001828	-	93	55.659	ENSGACG00000009055	-	88	57.198	Gasterosteus_aculeatus
ENSSDUG00000001828	-	83	38.900	ENSGAGG00000024915	SRFBP1	100	37.302	Gopherus_agassizii
ENSSDUG00000001828	-	71	65.789	ENSGGOG00000007725	SRFBP1	91	65.789	Gorilla_gorilla
ENSSDUG00000001828	-	87	51.017	ENSHCOG00000020644	-	88	50.998	Hippocampus_comes
ENSSDUG00000001828	-	87	36.505	ENSSTOG00000029184	SRFBP1	99	36.346	Ictidomys_tridecemlineatus
ENSSDUG00000001828	-	67	73.333	ENSJJAG00000013229	Srfbp1	100	36.105	Jaculus_jaculus
ENSSDUG00000001828	-	85	56.855	ENSLBEG00000013924	-	96	55.332	Labrus_bergylta
ENSSDUG00000001828	-	54	76.471	ENSLACG00000004456	SRFBP1	88	71.053	Latimeria_chalumnae
ENSSDUG00000001828	-	85	43.281	ENSLOCG00000008772	SRFBP1	99	43.083	Lepisosteus_oculatus
ENSSDUG00000001828	-	87	36.015	ENSLAFG00000015303	SRFBP1	99	35.048	Loxodonta_africana
ENSSDUG00000001828	-	86	37.305	ENSMFAG00000031263	SRFBP1	91	65.789	Macaca_fascicularis
ENSSDUG00000001828	-	86	37.305	ENSMMUG00000021009	SRFBP1	91	65.789	Macaca_mulatta
ENSSDUG00000001828	-	86	36.914	ENSMNEG00000040870	SRFBP1	91	65.789	Macaca_nemestrina
ENSSDUG00000001828	-	89	63.567	ENSMAMG00000004632	-	92	63.415	Mastacembelus_armatus
ENSSDUG00000001828	-	87	61.719	ENSMZEG00005000432	-	93	60.571	Maylandia_zebra
ENSSDUG00000001828	-	58	62.609	ENSMAUG00000009431	Srfbp1	95	35.659	Mesocricetus_auratus
ENSSDUG00000001828	-	86	38.200	ENSMICG00000042923	SRFBP1	99	38.400	Microcebus_murinus
ENSSDUG00000001828	-	87	37.051	ENSMOCG00000006206	Srfbp1	90	67.568	Microtus_ochrogaster
ENSSDUG00000001828	-	85	54.016	ENSMMOG00000021202	-	99	57.087	Mola_mola
ENSSDUG00000001828	-	88	68.834	ENSMALG00000001812	-	92	68.880	Monopterus_albus
ENSSDUG00000001828	-	61	61.654	MGP_CAROLIEiJ_G0022271	Srfbp1	99	36.680	Mus_caroli
ENSSDUG00000001828	-	61	61.654	ENSMUSG00000024528	Srfbp1	71	61.654	Mus_musculus
ENSSDUG00000001828	-	61	60.150	MGP_PahariEiJ_G0019004	Srfbp1	99	35.417	Mus_pahari
ENSSDUG00000001828	-	61	62.406	MGP_SPRETEiJ_G0023184	Srfbp1	71	62.406	Mus_spretus
ENSSDUG00000001828	-	83	37.120	ENSMPUG00000013031	SRFBP1	100	37.000	Mustela_putorius_furo
ENSSDUG00000001828	-	84	38.039	ENSMLUG00000009984	SRFBP1	99	37.769	Myotis_lucifugus
ENSSDUG00000001828	-	84	35.917	ENSNGAG00000013229	Srfbp1	89	56.098	Nannospalax_galili
ENSSDUG00000001828	-	86	58.097	ENSNBRG00000001146	-	99	58.300	Neolamprologus_brichardi
ENSSDUG00000001828	-	64	41.131	ENSNLEG00000011949	SRFBP1	82	40.464	Nomascus_leucogenys
ENSSDUG00000001828	-	60	62.162	ENSOANG00000010042	-	88	62.162	Ornithorhynchus_anatinus
ENSSDUG00000001828	-	63	60.870	ENSOCUG00000009556	SRFBP1	98	37.885	Oryctolagus_cuniculus
ENSSDUG00000001828	-	90	49.908	ENSORLG00000014234	-	90	47.890	Oryzias_latipes
ENSSDUG00000001828	-	89	46.690	ENSORLG00020020129	-	91	45.993	Oryzias_latipes_hni
ENSSDUG00000001828	-	85	48.560	ENSORLG00015000238	-	98	46.154	Oryzias_latipes_hsok
ENSSDUG00000001828	-	86	35.259	ENSOGAG00000032423	SRFBP1	99	36.111	Otolemur_garnettii
ENSSDUG00000001828	-	86	37.791	ENSPPAG00000035848	SRFBP1	76	65.789	Pan_paniscus
ENSSDUG00000001828	-	86	39.250	ENSPPRG00000001695	SRFBP1	99	38.716	Panthera_pardus
ENSSDUG00000001828	-	71	65.789	ENSPTIG00000012305	SRFBP1	92	65.789	Panthera_tigris_altaica
ENSSDUG00000001828	-	86	37.791	ENSPTRG00000017172	SRFBP1	76	65.789	Pan_troglodytes
ENSSDUG00000001828	-	86	37.673	ENSPANG00000003799	SRFBP1	91	65.789	Papio_anubis
ENSSDUG00000001828	-	85	44.000	ENSPKIG00000024291	-	99	44.981	Paramormyrops_kingsleyae
ENSSDUG00000001828	-	86	37.228	ENSPSIG00000010650	SRFBP1	99	38.552	Pelodiscus_sinensis
ENSSDUG00000001828	-	74	88.889	ENSPMGG00000001675	-	99	51.205	Periophthalmus_magnuspinnatus
ENSSDUG00000001828	-	86	36.505	ENSPCIG00000028532	SRFBP1	95	36.452	Phascolarctos_cinereus
ENSSDUG00000001828	-	91	48.794	ENSPFOG00000005272	-	91	51.357	Poecilia_formosa
ENSSDUG00000001828	-	91	53.220	ENSPLAG00000018282	-	92	54.335	Poecilia_latipinna
ENSSDUG00000001828	-	86	53.137	ENSPMEG00000020184	-	94	54.373	Poecilia_mexicana
ENSSDUG00000001828	-	85	51.224	ENSPREG00000017248	-	99	50.607	Poecilia_reticulata
ENSSDUG00000001828	-	71	65.789	ENSPPYG00000015714	SRFBP1	91	65.789	Pongo_abelii
ENSSDUG00000001828	-	85	38.552	ENSPCOG00000027331	SRFBP1	99	37.864	Propithecus_coquereli
ENSSDUG00000001828	-	88	60.113	ENSPNYG00000010355	-	99	55.263	Pundamilia_nyererei
ENSSDUG00000001828	-	87	59.712	ENSPNAG00000029666	srfbp1	91	59.712	Pygocentrus_nattereri
ENSSDUG00000001828	-	85	37.573	ENSSBOG00000015464	-	99	38.160	Saimiri_boliviensis_boliviensis
ENSSDUG00000001828	-	86	36.739	ENSSHAG00000016003	SRFBP1	99	37.087	Sarcophilus_harrisii
ENSSDUG00000001828	-	86	43.520	ENSSFOG00015001274	srfbp1	99	42.582	Scleropages_formosus
ENSSDUG00000001828	-	100	63.758	ENSSMAG00000020630	-	100	65.546	Scophthalmus_maximus
ENSSDUG00000001828	-	85	36.935	ENSSARG00000010669	SRFBP1	99	37.924	Sorex_araneus
ENSSDUG00000001828	-	84	36.364	ENSSPUG00000009204	SRFBP1	73	60.870	Sphenodon_punctatus
ENSSDUG00000001828	-	92	66.058	ENSSPAG00000010728	-	100	65.232	Stegastes_partitus
ENSSDUG00000001828	-	86	38.538	ENSSSCG00000022656	SRFBP1	76	61.905	Sus_scrofa
ENSSDUG00000001828	-	86	51.093	ENSTNIG00000009267	-	98	51.491	Tetraodon_nigroviridis
ENSSDUG00000001828	-	83	36.680	ENSUAMG00000016707	SRFBP1	100	36.419	Ursus_americanus
ENSSDUG00000001828	-	69	67.568	ENSUMAG00000018340	SRFBP1	92	67.568	Ursus_maritimus
ENSSDUG00000001828	-	86	36.978	ENSVPAG00000005714	SRFBP1	92	61.905	Vicugna_pacos
ENSSDUG00000001828	-	86	38.124	ENSVVUG00000019178	SRFBP1	99	37.897	Vulpes_vulpes
ENSSDUG00000001828	-	85	37.376	ENSXETG00000004681	srfbp1	99	36.436	Xenopus_tropicalis
ENSSDUG00000001828	-	85	56.301	ENSXCOG00000003410	-	99	56.048	Xiphophorus_couchianus
ENSSDUG00000001828	-	86	56.400	ENSXMAG00000026251	-	91	55.238	Xiphophorus_maculatus