EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001840 (Gene tree)
Gene ID: 111235083
Gene Symbol: pan2
Alias: fc27e10|si:dkey-126g1.10|wu:fc27e10
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 11161 bases
Position: chrBDQW01000468.1:1527912-1539072
Accession: 111235083
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002432	RNase_T	PF00929.24	5.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002496	-	4958	XM_022763400	ENSSDUP00000002432	1210 (aa)	XP_022619121	UPI000BBE86CB

Gene Model

Click here to download ENSSDUG00000001840's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001840	pan2	100	97.025	ENSAPOG00000022955	pan2	100	97.025	Acanthochromis_polyacanthus
ENSSDUG00000001840	pan2	99	76.007	ENSAMEG00000003824	PAN2	100	75.780	Ailuropoda_melanoleuca
ENSSDUG00000001840	pan2	98	72.628	ENSACIG00000012858	PAN2	99	72.521	Amphilophus_citrinellus
ENSSDUG00000001840	pan2	99	92.180	ENSACIG00000013079	pan2	99	92.180	Amphilophus_citrinellus
ENSSDUG00000001840	pan2	100	97.107	ENSAOCG00000022334	pan2	100	97.107	Amphiprion_ocellaris
ENSSDUG00000001840	pan2	100	97.438	ENSAPEG00000022760	pan2	100	97.438	Amphiprion_percula
ENSSDUG00000001840	pan2	99	97.333	ENSATEG00000024030	pan2	100	97.333	Anabas_testudineus
ENSSDUG00000001840	pan2	93	77.778	ENSAPLG00000005195	PAN2	100	77.582	Anas_platyrhynchos
ENSSDUG00000001840	pan2	99	77.348	ENSACAG00000007067	PAN2	100	77.329	Anolis_carolinensis
ENSSDUG00000001840	pan2	99	75.678	ENSANAG00000036468	PAN2	97	82.337	Aotus_nancymaae
ENSSDUG00000001840	pan2	100	95.702	ENSACLG00000023674	pan2	100	95.868	Astatotilapia_calliptera
ENSSDUG00000001840	pan2	98	71.380	ENSACLG00000023821	pan2	99	71.188	Astatotilapia_calliptera
ENSSDUG00000001840	pan2	99	87.708	ENSAMXG00000005418	pan2	98	87.677	Astyanax_mexicanus
ENSSDUG00000001840	pan2	99	75.924	ENSBTAG00000004376	PAN2	100	75.698	Bos_taurus
ENSSDUG00000001840	pan2	99	75.431	ENSCJAG00000011141	PAN2	100	75.205	Callithrix_jacchus
ENSSDUG00000001840	pan2	99	75.842	ENSCAFG00000000119	PAN2	94	83.060	Canis_familiaris
ENSSDUG00000001840	pan2	99	75.475	ENSCAFG00020024865	PAN2	100	74.650	Canis_lupus_dingo
ENSSDUG00000001840	pan2	99	75.369	ENSCHIG00000026935	PAN2	100	74.491	Capra_hircus
ENSSDUG00000001840	pan2	99	74.918	ENSTSYG00000006927	PAN2	97	82.065	Carlito_syrichta
ENSSDUG00000001840	pan2	99	75.490	ENSCPOG00000014918	PAN2	100	74.857	Cavia_porcellus
ENSSDUG00000001840	pan2	99	75.596	ENSCCAG00000036637	PAN2	97	82.065	Cebus_capucinus
ENSSDUG00000001840	pan2	99	75.514	ENSCATG00000045076	PAN2	97	82.514	Cercocebus_atys
ENSSDUG00000001840	pan2	99	75.371	ENSCLAG00000011700	PAN2	100	74.612	Chinchilla_lanigera
ENSSDUG00000001840	pan2	99	75.267	ENSCSAG00000005173	PAN2	100	75.041	Chlorocebus_sabaeus
ENSSDUG00000001840	pan2	99	77.183	ENSCPBG00000014029	PAN2	100	76.834	Chrysemys_picta_bellii
ENSSDUG00000001840	pan2	90	47.350	ENSCSAVG00000003833	-	99	51.709	Ciona_savignyi
ENSSDUG00000001840	pan2	99	73.974	ENSCANG00000017798	PAN2	100	73.749	Colobus_angolensis_palliatus
ENSSDUG00000001840	pan2	99	75.760	ENSCGRG00001019707	Pan2	100	75.534	Cricetulus_griseus_chok1gshd
ENSSDUG00000001840	pan2	99	74.959	ENSCGRG00000009996	Pan2	100	74.409	Cricetulus_griseus_crigri
ENSSDUG00000001840	pan2	100	90.165	ENSCSEG00000021529	pan2	100	90.165	Cynoglossus_semilaevis
ENSSDUG00000001840	pan2	100	94.628	ENSCVAG00000010197	pan2	100	94.628	Cyprinodon_variegatus
ENSSDUG00000001840	pan2	100	87.448	ENSDARG00000074675	pan2	100	86.870	Danio_rerio
ENSSDUG00000001840	pan2	99	76.132	ENSDNOG00000010940	PAN2	100	75.885	Dasypus_novemcinctus
ENSSDUG00000001840	pan2	93	42.049	FBgn0033352	PAN2	96	41.393	Drosophila_melanogaster
ENSSDUG00000001840	pan2	75	83.944	ENSETEG00000012041	PAN2	81	84.682	Echinops_telfairi
ENSSDUG00000001840	pan2	98	57.131	ENSEBUG00000002773	pan2	99	56.608	Eptatretus_burgeri
ENSSDUG00000001840	pan2	99	75.596	ENSEASG00005005235	PAN2	100	75.367	Equus_asinus_asinus
ENSSDUG00000001840	pan2	99	76.089	ENSECAG00000019814	PAN2	100	75.862	Equus_caballus
ENSSDUG00000001840	pan2	99	90.389	ENSELUG00000024604	pan2	99	90.555	Esox_lucius
ENSSDUG00000001840	pan2	99	75.924	ENSFCAG00000012021	PAN2	100	75.698	Felis_catus
ENSSDUG00000001840	pan2	99	77.307	ENSFALG00000000464	PAN2	99	76.840	Ficedula_albicollis
ENSSDUG00000001840	pan2	99	75.369	ENSFDAG00000017104	PAN2	100	74.654	Fukomys_damarensis
ENSSDUG00000001840	pan2	90	93.202	ENSFHEG00000000157	pan2	97	93.202	Fundulus_heteroclitus
ENSSDUG00000001840	pan2	100	89.035	ENSGMOG00000007249	pan2	99	88.458	Gadus_morhua
ENSSDUG00000001840	pan2	99	78.073	ENSGALG00000031512	PAN2	100	77.595	Gallus_gallus
ENSSDUG00000001840	pan2	100	94.380	ENSGAFG00000000284	pan2	100	94.380	Gambusia_affinis
ENSSDUG00000001840	pan2	100	93.169	ENSGACG00000010722	pan2	99	93.416	Gasterosteus_aculeatus
ENSSDUG00000001840	pan2	99	76.606	ENSGAGG00000007868	PAN2	100	76.340	Gopherus_agassizii
ENSSDUG00000001840	pan2	99	75.431	ENSGGOG00000009115	PAN2	97	82.514	Gorilla_gorilla
ENSSDUG00000001840	pan2	100	95.372	ENSHBUG00000005234	pan2	100	95.537	Haplochromis_burtoni
ENSSDUG00000001840	pan2	99	74.918	ENSHGLG00000005647	PAN2	99	74.281	Heterocephalus_glaber_female
ENSSDUG00000001840	pan2	99	74.671	ENSHGLG00100014057	PAN2	99	74.035	Heterocephalus_glaber_male
ENSSDUG00000001840	pan2	100	92.645	ENSHCOG00000007920	pan2	100	92.645	Hippocampus_comes
ENSSDUG00000001840	pan2	100	87.686	ENSIPUG00000011065	PAN2	100	87.273	Ictalurus_punctatus
ENSSDUG00000001840	pan2	94	75.736	ENSSTOG00000015974	PAN2	100	75.355	Ictidomys_tridecemlineatus
ENSSDUG00000001840	pan2	99	75.185	ENSJJAG00000013044	Pan2	98	74.959	Jaculus_jaculus
ENSSDUG00000001840	pan2	100	94.876	ENSKMAG00000006192	pan2	100	94.876	Kryptolebias_marmoratus
ENSSDUG00000001840	pan2	93	94.517	ENSLBEG00000015763	pan2	97	94.517	Labrus_bergylta
ENSSDUG00000001840	pan2	99	70.806	ENSLACG00000018694	PAN2	100	70.233	Latimeria_chalumnae
ENSSDUG00000001840	pan2	100	87.325	ENSLOCG00000004333	pan2	99	87.160	Lepisosteus_oculatus
ENSSDUG00000001840	pan2	99	73.508	ENSLAFG00000014873	PAN2	100	72.794	Loxodonta_africana
ENSSDUG00000001840	pan2	99	75.349	ENSMFAG00000002293	PAN2	97	82.514	Macaca_fascicularis
ENSSDUG00000001840	pan2	99	75.349	ENSMMUG00000013482	PAN2	94	82.514	Macaca_mulatta
ENSSDUG00000001840	pan2	99	75.431	ENSMNEG00000033264	PAN2	97	82.240	Macaca_nemestrina
ENSSDUG00000001840	pan2	99	75.514	ENSMLEG00000037388	PAN2	97	82.514	Mandrillus_leucophaeus
ENSSDUG00000001840	pan2	99	96.278	ENSMAMG00000001624	pan2	100	96.278	Mastacembelus_armatus
ENSSDUG00000001840	pan2	100	95.702	ENSMZEG00005026462	pan2	100	95.868	Maylandia_zebra
ENSSDUG00000001840	pan2	98	72.789	ENSMZEG00005026472	pan2	99	72.789	Maylandia_zebra
ENSSDUG00000001840	pan2	96	78.559	ENSMGAG00000001439	PAN2	99	78.283	Meleagris_gallopavo
ENSSDUG00000001840	pan2	99	75.391	ENSMAUG00000012602	Pan2	99	74.918	Mesocricetus_auratus
ENSSDUG00000001840	pan2	99	75.596	ENSMICG00000017661	PAN2	97	80.769	Microcebus_murinus
ENSSDUG00000001840	pan2	99	75.349	ENSMOCG00000007191	Pan2	100	75.205	Microtus_ochrogaster
ENSSDUG00000001840	pan2	99	95.075	ENSMMOG00000009313	pan2	97	95.075	Mola_mola
ENSSDUG00000001840	pan2	99	95.699	ENSMALG00000013377	pan2	100	95.699	Monopterus_albus
ENSSDUG00000001840	pan2	99	75.000	MGP_CAROLIEiJ_G0015930	Pan2	100	74.367	Mus_caroli
ENSSDUG00000001840	pan2	99	75.638	ENSMUSG00000005682	Pan2	100	75.164	Mus_musculus
ENSSDUG00000001840	pan2	99	75.163	MGP_PahariEiJ_G0031154	Pan2	100	74.531	Mus_pahari
ENSSDUG00000001840	pan2	99	75.802	MGP_SPRETEiJ_G0016755	Pan2	100	75.576	Mus_spretus
ENSSDUG00000001840	pan2	99	76.089	ENSMPUG00000001383	PAN2	100	75.862	Mustela_putorius_furo
ENSSDUG00000001840	pan2	99	75.780	ENSMLUG00000006737	PAN2	100	75.616	Myotis_lucifugus
ENSSDUG00000001840	pan2	99	75.596	ENSNGAG00000007930	Pan2	100	75.369	Nannospalax_galili
ENSSDUG00000001840	pan2	92	96.804	ENSNBRG00000006585	pan2	99	96.804	Neolamprologus_brichardi
ENSSDUG00000001840	pan2	99	71.452	ENSNLEG00000017499	PAN2	97	81.967	Nomascus_leucogenys
ENSSDUG00000001840	pan2	99	77.385	ENSMEUG00000010125	PAN2	100	77.303	Notamacropus_eugenii
ENSSDUG00000001840	pan2	99	75.082	ENSOPRG00000001468	PAN2	100	74.857	Ochotona_princeps
ENSSDUG00000001840	pan2	99	74.898	ENSODEG00000007203	PAN2	100	74.430	Octodon_degus
ENSSDUG00000001840	pan2	99	93.061	ENSONIG00000016732	pan2	100	92.898	Oreochromis_niloticus
ENSSDUG00000001840	pan2	81	68.426	ENSOANG00000005151	PAN2	99	67.597	Ornithorhynchus_anatinus
ENSSDUG00000001840	pan2	99	75.347	ENSOCUG00000007227	PAN2	100	74.857	Oryctolagus_cuniculus
ENSSDUG00000001840	pan2	99	93.058	ENSORLG00000015195	pan2	100	92.975	Oryzias_latipes
ENSSDUG00000001840	pan2	99	92.893	ENSORLG00020000277	pan2	100	92.810	Oryzias_latipes_hni
ENSSDUG00000001840	pan2	99	92.727	ENSORLG00015005193	pan2	100	92.645	Oryzias_latipes_hsok
ENSSDUG00000001840	pan2	99	93.058	ENSOMEG00000022087	pan2	100	92.975	Oryzias_melastigma
ENSSDUG00000001840	pan2	99	74.817	ENSOGAG00000030620	PAN2	100	74.186	Otolemur_garnettii
ENSSDUG00000001840	pan2	99	75.842	ENSOARG00000009379	PAN2	100	75.616	Ovis_aries
ENSSDUG00000001840	pan2	99	75.431	ENSPPAG00000001208	PAN2	97	82.514	Pan_paniscus
ENSSDUG00000001840	pan2	99	75.842	ENSPPRG00000021586	PAN2	100	75.616	Panthera_pardus
ENSSDUG00000001840	pan2	99	72.281	ENSPTIG00000012494	PAN2	100	71.895	Panthera_tigris_altaica
ENSSDUG00000001840	pan2	99	75.431	ENSPTRG00000052054	PAN2	97	82.514	Pan_troglodytes
ENSSDUG00000001840	pan2	92	76.854	ENSPANG00000018906	PAN2	97	82.514	Papio_anubis
ENSSDUG00000001840	pan2	100	87.521	ENSPKIG00000003973	pan2	100	87.190	Paramormyrops_kingsleyae
ENSSDUG00000001840	pan2	99	74.013	ENSPSIG00000003267	PAN2	100	73.827	Pelodiscus_sinensis
ENSSDUG00000001840	pan2	99	91.901	ENSPMGG00000023186	pan2	100	91.818	Periophthalmus_magnuspinnatus
ENSSDUG00000001840	pan2	99	74.817	ENSPEMG00000018505	Pan2	100	74.409	Peromyscus_maniculatus_bairdii
ENSSDUG00000001840	pan2	90	67.602	ENSPMAG00000004731	pan2	100	67.240	Petromyzon_marinus
ENSSDUG00000001840	pan2	99	77.595	ENSPCIG00000024643	PAN2	100	77.265	Phascolarctos_cinereus
ENSSDUG00000001840	pan2	100	94.545	ENSPFOG00000008392	pan2	100	94.545	Poecilia_formosa
ENSSDUG00000001840	pan2	100	94.463	ENSPLAG00000009198	pan2	100	94.463	Poecilia_latipinna
ENSSDUG00000001840	pan2	100	94.463	ENSPMEG00000001484	pan2	100	94.463	Poecilia_mexicana
ENSSDUG00000001840	pan2	100	94.711	ENSPREG00000000900	pan2	100	94.711	Poecilia_reticulata
ENSSDUG00000001840	pan2	88	77.557	ENSPPYG00000004656	PAN2	99	77.950	Pongo_abelii
ENSSDUG00000001840	pan2	92	77.061	ENSPCAG00000011047	PAN2	99	76.813	Procavia_capensis
ENSSDUG00000001840	pan2	99	75.596	ENSPCOG00000018263	PAN2	100	75.369	Propithecus_coquereli
ENSSDUG00000001840	pan2	94	73.695	ENSPVAG00000007591	PAN2	100	68.036	Pteropus_vampyrus
ENSSDUG00000001840	pan2	99	95.670	ENSPNYG00000002629	pan2	99	95.837	Pundamilia_nyererei
ENSSDUG00000001840	pan2	100	89.587	ENSPNAG00000027140	pan2	100	89.256	Pygocentrus_nattereri
ENSSDUG00000001840	pan2	99	75.802	ENSRNOG00000032441	Pan2	100	75.329	Rattus_norvegicus
ENSSDUG00000001840	pan2	99	75.267	ENSRBIG00000029591	PAN2	97	81.967	Rhinopithecus_bieti
ENSSDUG00000001840	pan2	99	75.185	ENSRROG00000041950	PAN2	97	81.967	Rhinopithecus_roxellana
ENSSDUG00000001840	pan2	89	33.136	YGL094C	-	97	32.738	Saccharomyces_cerevisiae
ENSSDUG00000001840	pan2	99	75.514	ENSSBOG00000027343	PAN2	97	82.065	Saimiri_boliviensis_boliviensis
ENSSDUG00000001840	pan2	92	77.462	ENSSHAG00000000122	PAN2	99	78.505	Sarcophilus_harrisii
ENSSDUG00000001840	pan2	100	87.851	ENSSFOG00015017740	pan2	100	87.521	Scleropages_formosus
ENSSDUG00000001840	pan2	100	94.554	ENSSMAG00000020901	pan2	100	94.719	Scophthalmus_maximus
ENSSDUG00000001840	pan2	100	99.504	ENSSLDG00000013866	pan2	100	99.504	Seriola_lalandi_dorsalis
ENSSDUG00000001840	pan2	92	76.164	ENSSARG00000013350	PAN2	92	75.858	Sorex_araneus
ENSSDUG00000001840	pan2	92	79.051	ENSSPUG00000004270	PAN2	99	78.674	Sphenodon_punctatus
ENSSDUG00000001840	pan2	100	97.851	ENSSPAG00000019970	pan2	100	97.851	Stegastes_partitus
ENSSDUG00000001840	pan2	99	75.596	ENSSSCG00000000393	PAN2	100	75.369	Sus_scrofa
ENSSDUG00000001840	pan2	100	93.554	ENSTRUG00000014260	pan2	100	93.554	Takifugu_rubripes
ENSSDUG00000001840	pan2	100	93.802	ENSTNIG00000012537	pan2	99	93.802	Tetraodon_nigroviridis
ENSSDUG00000001840	pan2	80	75.330	ENSTTRG00000007150	PAN2	80	74.967	Tursiops_truncatus
ENSSDUG00000001840	pan2	99	75.862	ENSUAMG00000026522	PAN2	100	75.636	Ursus_americanus
ENSSDUG00000001840	pan2	99	75.367	ENSUMAG00000017020	PAN2	100	75.061	Ursus_maritimus
ENSSDUG00000001840	pan2	79	90.640	ENSVPAG00000007309	PAN2	84	90.640	Vicugna_pacos
ENSSDUG00000001840	pan2	99	75.924	ENSVVUG00000021878	PAN2	100	75.698	Vulpes_vulpes
ENSSDUG00000001840	pan2	99	74.444	ENSXETG00000009434	pan2	100	75.337	Xenopus_tropicalis
ENSSDUG00000001840	pan2	99	88.512	ENSXCOG00000014391	pan2	100	88.430	Xiphophorus_couchianus
ENSSDUG00000001840	pan2	100	94.545	ENSXMAG00000011661	pan2	100	94.545	Xiphophorus_maculatus