EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001874 (Gene tree)
Gene ID: 111216882
Gene Symbol: cd3eap
Alias: cd3ap
Full Name: DNA-directed RNA polymerase I subunit RPA34-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 64425 bases
Position: chrBDQW01000036.1:849097-913521
Accession: 111216882
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002411	RNA_polI_A34	PF08208.11	6.1e-40	1	1
ENSSDUP00000002421	RNA_polI_A34	PF08208.11	6.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002486	-	2012	XM_022738525	ENSSDUP00000002421	342 (aa)	XP_022594246	UPI000BBE94A6
ENSSDUT00000002477	-	2360	-	ENSSDUP00000002411	376 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000001874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001874's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001874	cd3eap	60	75.122	ENSAPOG00000001121	cd3eap	84	66.049	Acanthochromis_polyacanthus
ENSSDUG00000001874	cd3eap	93	60.308	ENSACIG00000007610	-	99	62.462	Amphilophus_citrinellus
ENSSDUG00000001874	cd3eap	60	74.634	ENSAOCG00000007088	cd3eap	86	66.667	Amphiprion_ocellaris
ENSSDUG00000001874	cd3eap	60	74.634	ENSAPEG00000016153	cd3eap	86	66.361	Amphiprion_percula
ENSSDUG00000001874	cd3eap	95	74.096	ENSATEG00000006485	cd3eap	95	77.778	Anabas_testudineus
ENSSDUG00000001874	cd3eap	100	74.352	ENSACLG00000018258	cd3eap	100	73.775	Astatotilapia_calliptera
ENSSDUG00000001874	cd3eap	93	39.498	ENSAMXG00000043778	cd3eap	53	45.294	Astyanax_mexicanus
ENSSDUG00000001874	cd3eap	100	55.236	ENSCSEG00000005914	cd3eap	72	60.900	Cynoglossus_semilaevis
ENSSDUG00000001874	cd3eap	100	60.955	ENSCVAG00000000356	cd3eap	92	62.195	Cyprinodon_variegatus
ENSSDUG00000001874	cd3eap	92	43.849	ENSELUG00000012387	cd3eap	90	45.000	Esox_lucius
ENSSDUG00000001874	cd3eap	87	62.295	ENSFHEG00000020394	-	95	60.559	Fundulus_heteroclitus
ENSSDUG00000001874	cd3eap	100	60.405	ENSGAFG00000003667	cd3eap	99	63.584	Gambusia_affinis
ENSSDUG00000001874	cd3eap	66	76.000	ENSGACG00000012623	cd3eap	89	76.498	Gasterosteus_aculeatus
ENSSDUG00000001874	cd3eap	100	74.352	ENSHBUG00000001063	cd3eap	100	73.775	Haplochromis_burtoni
ENSSDUG00000001874	cd3eap	73	50.593	ENSHCOG00000019142	-	68	58.974	Hippocampus_comes
ENSSDUG00000001874	cd3eap	87	38.127	ENSIPUG00000019546	cd3eap	51	47.531	Ictalurus_punctatus
ENSSDUG00000001874	cd3eap	100	65.706	ENSKMAG00000015084	cd3eap	100	63.977	Kryptolebias_marmoratus
ENSSDUG00000001874	cd3eap	92	75.549	ENSLBEG00000008226	cd3eap	97	75.862	Labrus_bergylta
ENSSDUG00000001874	cd3eap	96	75.610	ENSMAMG00000016319	cd3eap	96	76.615	Mastacembelus_armatus
ENSSDUG00000001874	cd3eap	100	77.035	ENSMZEG00005024408	cd3eap	100	76.163	Maylandia_zebra
ENSSDUG00000001874	cd3eap	95	71.733	ENSMALG00000010452	cd3eap	95	72.205	Monopterus_albus
ENSSDUG00000001874	cd3eap	100	73.699	ENSNBRG00000016766	cd3eap	100	74.566	Neolamprologus_brichardi
ENSSDUG00000001874	cd3eap	96	47.720	ENSORLG00000001427	-	68	55.556	Oryzias_latipes
ENSSDUG00000001874	cd3eap	93	47.962	ENSORLG00020019155	-	67	55.556	Oryzias_latipes_hni
ENSSDUG00000001874	cd3eap	62	58.491	ENSOMEG00000022922	cd3eap	63	58.216	Oryzias_melastigma
ENSSDUG00000001874	cd3eap	77	59.470	ENSPFOG00000016410	cd3eap	82	67.281	Poecilia_formosa
ENSSDUG00000001874	cd3eap	100	58.382	ENSPLAG00000023890	cd3eap	99	64.740	Poecilia_latipinna
ENSSDUG00000001874	cd3eap	100	58.213	ENSPMEG00000019111	cd3eap	99	63.112	Poecilia_mexicana
ENSSDUG00000001874	cd3eap	100	56.056	ENSPREG00000018959	-	92	62.154	Poecilia_reticulata
ENSSDUG00000001874	cd3eap	100	74.352	ENSPNYG00000022270	cd3eap	100	73.775	Pundamilia_nyererei
ENSSDUG00000001874	cd3eap	62	43.396	ENSPNAG00000005779	cd3eap	58	44.221	Pygocentrus_nattereri
ENSSDUG00000001874	cd3eap	95	75.380	ENSSMAG00000020182	cd3eap	100	76.023	Scophthalmus_maximus
ENSSDUG00000001874	cd3eap	100	97.668	ENSSLDG00000003180	cd3eap	100	97.668	Seriola_lalandi_dorsalis
ENSSDUG00000001874	cd3eap	61	77.404	ENSSPAG00000014760	-	95	67.988	Stegastes_partitus
ENSSDUG00000001874	cd3eap	94	49.844	ENSTRUG00000021943	-	97	48.882	Takifugu_rubripes
ENSSDUG00000001874	cd3eap	89	63.312	ENSXCOG00000009736	cd3eap	95	65.986	Xiphophorus_couchianus
ENSSDUG00000001874	cd3eap	95	61.515	ENSXMAG00000013127	cd3eap	94	64.545	Xiphophorus_maculatus