EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000001887 (Gene tree)
Gene ID: 111221179
Gene Symbol: pum3
Alias: cb379|im:7148292|puf-A|sb:cb379|si:ch211-241o7.5
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 13255 bases
Position: chrBDQW01000081.1:3798740-3811994
Accession: 111221179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002437	CPL	PF08144.11	2.1e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002502	-	3543	XM_022744536	ENSSDUP00000002437	664 (aa)	XP_022600257	UPI000BBE675C

Gene Model

Click here to download ENSSDUG00000001887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000001887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000001887	pum3	79	62.998	ENSG00000080608	PUM3	94	58.128	Homo_sapiens
ENSSDUG00000001887	pum3	99	85.113	ENSAPOG00000020252	pum3	100	84.662	Acanthochromis_polyacanthus
ENSSDUG00000001887	pum3	79	62.738	ENSAMEG00000012187	PUM3	91	57.990	Ailuropoda_melanoleuca
ENSSDUG00000001887	pum3	85	80.389	ENSACIG00000009786	pum3	94	80.389	Amphilophus_citrinellus
ENSSDUG00000001887	pum3	99	85.564	ENSAOCG00000004439	pum3	100	85.113	Amphiprion_ocellaris
ENSSDUG00000001887	pum3	99	85.714	ENSAPEG00000020523	pum3	100	85.263	Amphiprion_percula
ENSSDUG00000001887	pum3	99	86.707	ENSATEG00000005799	pum3	99	86.707	Anabas_testudineus
ENSSDUG00000001887	pum3	94	58.254	ENSAPLG00000002920	PUM3	95	59.603	Anas_platyrhynchos
ENSSDUG00000001887	pum3	93	54.516	ENSACAG00000003174	PUM3	86	61.014	Anolis_carolinensis
ENSSDUG00000001887	pum3	99	54.948	ENSANAG00000024520	PUM3	92	58.211	Aotus_nancymaae
ENSSDUG00000001887	pum3	99	80.572	ENSACLG00000001017	pum3	100	80.120	Astatotilapia_calliptera
ENSSDUG00000001887	pum3	96	65.679	ENSAMXG00000020911	pum3	99	64.060	Astyanax_mexicanus
ENSSDUG00000001887	pum3	99	54.518	ENSBTAG00000013357	PUM3	91	57.237	Bos_taurus
ENSSDUG00000001887	pum3	86	30.085	WBGene00014165	puf-12	75	30.085	Caenorhabditis_elegans
ENSSDUG00000001887	pum3	99	54.425	ENSCJAG00000010917	PUM3	92	57.561	Callithrix_jacchus
ENSSDUG00000001887	pum3	79	62.357	ENSCAFG00000002035	PUM3	89	58.221	Canis_familiaris
ENSSDUG00000001887	pum3	79	62.357	ENSCAFG00020026867	PUM3	89	58.221	Canis_lupus_dingo
ENSSDUG00000001887	pum3	96	56.761	ENSCHIG00000021559	PUM3	91	58.059	Capra_hircus
ENSSDUG00000001887	pum3	99	54.667	ENSTSYG00000007481	PUM3	91	57.237	Carlito_syrichta
ENSSDUG00000001887	pum3	79	60.531	ENSCAPG00000010592	-	91	56.013	Cavia_aperea
ENSSDUG00000001887	pum3	88	58.097	ENSCPOG00000008552	-	92	58.097	Cavia_porcellus
ENSSDUG00000001887	pum3	99	54.706	ENSCCAG00000032650	PUM3	92	58.049	Cebus_capucinus
ENSSDUG00000001887	pum3	99	55.259	ENSCATG00000024880	PUM3	91	58.059	Cercocebus_atys
ENSSDUG00000001887	pum3	90	55.730	ENSCLAG00000011892	PUM3	98	55.887	Chinchilla_lanigera
ENSSDUG00000001887	pum3	99	54.653	ENSCSAG00000008691	PUM3	91	57.895	Chlorocebus_sabaeus
ENSSDUG00000001887	pum3	75	51.800	ENSCHOG00000002535	PUM3	74	51.800	Choloepus_hoffmanni
ENSSDUG00000001887	pum3	99	55.422	ENSCPBG00000025470	PUM3	83	60.000	Chrysemys_picta_bellii
ENSSDUG00000001887	pum3	86	37.997	ENSCING00000024199	-	99	37.997	Ciona_intestinalis
ENSSDUG00000001887	pum3	81	39.383	ENSCSAVG00000006072	-	99	39.238	Ciona_savignyi
ENSSDUG00000001887	pum3	79	62.998	ENSCANG00000006142	PUM3	91	58.059	Colobus_angolensis_palliatus
ENSSDUG00000001887	pum3	99	54.074	ENSCGRG00001016402	Pum3	94	57.661	Cricetulus_griseus_chok1gshd
ENSSDUG00000001887	pum3	99	54.074	ENSCGRG00000010207	Pum3	94	57.661	Cricetulus_griseus_crigri
ENSSDUG00000001887	pum3	89	80.541	ENSCSEG00000001565	pum3	99	79.865	Cynoglossus_semilaevis
ENSSDUG00000001887	pum3	70	69.580	ENSCVAG00000006550	pum3	99	72.325	Cyprinodon_variegatus
ENSSDUG00000001887	pum3	96	64.798	ENSDARG00000087779	pum3	99	62.913	Danio_rerio
ENSSDUG00000001887	pum3	99	47.384	ENSDNOG00000008157	PUM3	70	47.259	Dasypus_novemcinctus
ENSSDUG00000001887	pum3	79	61.787	ENSETEG00000015331	PUM3	82	61.610	Echinops_telfairi
ENSSDUG00000001887	pum3	80	38.645	ENSEBUG00000011586	pum3	87	37.563	Eptatretus_burgeri
ENSSDUG00000001887	pum3	96	56.604	ENSEASG00005010350	PUM3	99	55.572	Equus_asinus_asinus
ENSSDUG00000001887	pum3	96	56.604	ENSECAG00000017193	PUM3	99	55.572	Equus_caballus
ENSSDUG00000001887	pum3	86	50.257	ENSEEUG00000010314	PUM3	100	48.649	Erinaceus_europaeus
ENSSDUG00000001887	pum3	99	64.918	ENSELUG00000002215	pum3	90	67.395	Esox_lucius
ENSSDUG00000001887	pum3	99	54.545	ENSFALG00000010509	PUM3	98	56.688	Ficedula_albicollis
ENSSDUG00000001887	pum3	99	54.815	ENSFDAG00000021027	PUM3	92	58.794	Fukomys_damarensis
ENSSDUG00000001887	pum3	99	80.769	ENSFHEG00000015576	pum3	100	78.534	Fundulus_heteroclitus
ENSSDUG00000001887	pum3	80	73.120	ENSGMOG00000014217	pum3	99	73.120	Gadus_morhua
ENSSDUG00000001887	pum3	86	59.664	ENSGALG00000010178	PUM3	93	59.664	Gallus_gallus
ENSSDUG00000001887	pum3	54	76.099	ENSGAFG00000001930	pum3	62	76.099	Gambusia_affinis
ENSSDUG00000001887	pum3	82	86.397	ENSGACG00000017878	pum3	99	86.397	Gasterosteus_aculeatus
ENSSDUG00000001887	pum3	94	57.325	ENSGAGG00000018983	PUM3	98	56.752	Gopherus_agassizii
ENSSDUG00000001887	pum3	99	54.290	ENSGGOG00000006143	PUM3	89	58.794	Gorilla_gorilla
ENSSDUG00000001887	pum3	99	68.263	ENSHBUG00000012903	pum3	100	66.018	Haplochromis_burtoni
ENSSDUG00000001887	pum3	99	55.255	ENSHGLG00000015868	-	95	58.143	Heterocephalus_glaber_female
ENSSDUG00000001887	pum3	99	55.338	ENSHGLG00100018825	PUM3	95	58.143	Heterocephalus_glaber_male
ENSSDUG00000001887	pum3	99	76.754	ENSHCOG00000010306	pum3	100	76.867	Hippocampus_comes
ENSSDUG00000001887	pum3	93	65.217	ENSIPUG00000024801	pum3	99	63.213	Ictalurus_punctatus
ENSSDUG00000001887	pum3	92	57.484	ENSSTOG00000009586	PUM3	96	57.903	Ictidomys_tridecemlineatus
ENSSDUG00000001887	pum3	99	53.608	ENSJJAG00000012563	Pum3	92	56.444	Jaculus_jaculus
ENSSDUG00000001887	pum3	99	79.669	ENSKMAG00000010277	pum3	100	79.367	Kryptolebias_marmoratus
ENSSDUG00000001887	pum3	99	84.581	ENSLBEG00000012213	pum3	100	84.281	Labrus_bergylta
ENSSDUG00000001887	pum3	99	55.723	ENSLACG00000008312	PUM3	93	57.305	Latimeria_chalumnae
ENSSDUG00000001887	pum3	99	60.301	ENSLOCG00000012529	pum3	97	62.378	Lepisosteus_oculatus
ENSSDUG00000001887	pum3	92	56.688	ENSLAFG00000017341	PUM3	95	57.724	Loxodonta_africana
ENSSDUG00000001887	pum3	99	54.653	ENSMFAG00000001430	PUM3	91	58.059	Macaca_fascicularis
ENSSDUG00000001887	pum3	99	54.653	ENSMMUG00000002362	PUM3	90	58.059	Macaca_mulatta
ENSSDUG00000001887	pum3	99	54.653	ENSMNEG00000035288	PUM3	91	58.059	Macaca_nemestrina
ENSSDUG00000001887	pum3	99	54.653	ENSMLEG00000034820	PUM3	91	57.895	Mandrillus_leucophaeus
ENSSDUG00000001887	pum3	99	85.392	ENSMAMG00000022861	pum3	100	85.241	Mastacembelus_armatus
ENSSDUG00000001887	pum3	99	80.694	ENSMZEG00005014205	pum3	97	80.241	Maylandia_zebra
ENSSDUG00000001887	pum3	80	57.062	ENSMGAG00000002255	PUM3	97	52.984	Meleagris_gallopavo
ENSSDUG00000001887	pum3	99	53.778	ENSMAUG00000009733	Pum3	94	57.331	Mesocricetus_auratus
ENSSDUG00000001887	pum3	99	53.304	ENSMICG00000045916	PUM3	78	57.789	Microcebus_murinus
ENSSDUG00000001887	pum3	99	54.505	ENSMOCG00000019519	-	96	57.258	Microtus_ochrogaster
ENSSDUG00000001887	pum3	99	53.904	ENSMOCG00000014830	-	99	54.792	Microtus_ochrogaster
ENSSDUG00000001887	pum3	95	78.662	ENSMMOG00000012184	pum3	96	78.618	Mola_mola
ENSSDUG00000001887	pum3	79	61.333	ENSMODG00000015417	PUM3	77	58.854	Monodelphis_domestica
ENSSDUG00000001887	pum3	99	87.519	ENSMALG00000022164	pum3	92	86.917	Monopterus_albus
ENSSDUG00000001887	pum3	99	53.914	MGP_CAROLIEiJ_G0022845	Pum3	89	57.956	Mus_caroli
ENSSDUG00000001887	pum3	99	53.926	ENSMUSG00000041360	Pum3	89	57.621	Mus_musculus
ENSSDUG00000001887	pum3	94	55.416	MGP_PahariEiJ_G0014338	Pum3	95	56.704	Mus_pahari
ENSSDUG00000001887	pum3	99	53.926	MGP_SPRETEiJ_G0023763	Pum3	89	57.621	Mus_spretus
ENSSDUG00000001887	pum3	95	55.276	ENSMPUG00000005125	PUM3	91	56.436	Mustela_putorius_furo
ENSSDUG00000001887	pum3	99	53.926	ENSMLUG00000002309	PUM3	92	57.003	Myotis_lucifugus
ENSSDUG00000001887	pum3	78	60.308	ENSNGAG00000019468	Pum3	92	54.902	Nannospalax_galili
ENSSDUG00000001887	pum3	94	74.722	ENSNBRG00000021370	pum3	92	74.715	Neolamprologus_brichardi
ENSSDUG00000001887	pum3	99	54.801	ENSNLEG00000008712	PUM3	91	58.224	Nomascus_leucogenys
ENSSDUG00000001887	pum3	73	45.082	ENSMEUG00000013606	-	97	45.030	Notamacropus_eugenii
ENSSDUG00000001887	pum3	52	54.179	ENSOPRG00000004225	-	55	53.911	Ochotona_princeps
ENSSDUG00000001887	pum3	99	51.032	ENSODEG00000016477	-	89	54.167	Octodon_degus
ENSSDUG00000001887	pum3	99	55.178	ENSODEG00000003625	-	89	59.464	Octodon_degus
ENSSDUG00000001887	pum3	99	81.081	ENSONIG00000012733	pum3	100	80.631	Oreochromis_niloticus
ENSSDUG00000001887	pum3	79	59.125	ENSOANG00000014995	PUM3	98	59.032	Ornithorhynchus_anatinus
ENSSDUG00000001887	pum3	99	53.927	ENSOCUG00000026104	-	90	57.789	Oryctolagus_cuniculus
ENSSDUG00000001887	pum3	99	54.230	ENSOCUG00000004189	-	92	57.166	Oryctolagus_cuniculus
ENSSDUG00000001887	pum3	99	73.913	ENSORLG00000014935	pum3	100	73.013	Oryzias_latipes
ENSSDUG00000001887	pum3	99	73.613	ENSORLG00020002841	pum3	100	72.714	Oryzias_latipes_hni
ENSSDUG00000001887	pum3	99	74.213	ENSORLG00015015906	pum3	100	73.163	Oryzias_latipes_hsok
ENSSDUG00000001887	pum3	99	72.864	ENSOMEG00000009427	pum3	100	72.714	Oryzias_melastigma
ENSSDUG00000001887	pum3	77	46.693	ENSOGAG00000033481	-	90	44.349	Otolemur_garnettii
ENSSDUG00000001887	pum3	99	54.559	ENSOGAG00000008125	-	96	57.692	Otolemur_garnettii
ENSSDUG00000001887	pum3	96	56.672	ENSOARG00000013337	PUM3	91	57.800	Ovis_aries
ENSSDUG00000001887	pum3	79	62.808	ENSPPAG00000041337	PUM3	89	58.794	Pan_paniscus
ENSSDUG00000001887	pum3	79	62.928	ENSPPRG00000000809	PUM3	91	57.825	Panthera_pardus
ENSSDUG00000001887	pum3	79	63.498	ENSPTIG00000021934	PUM3	91	58.320	Panthera_tigris_altaica
ENSSDUG00000001887	pum3	79	62.998	ENSPTRG00000020735	PUM3	89	58.961	Pan_troglodytes
ENSSDUG00000001887	pum3	99	54.948	ENSPANG00000025118	PUM3	91	58.224	Papio_anubis
ENSSDUG00000001887	pum3	100	61.550	ENSPKIG00000022249	pum3	99	61.011	Paramormyrops_kingsleyae
ENSSDUG00000001887	pum3	99	56.193	ENSPSIG00000016272	PUM3	88	60.967	Pelodiscus_sinensis
ENSSDUG00000001887	pum3	74	76.162	ENSPMGG00000021261	pum3	99	76.162	Periophthalmus_magnuspinnatus
ENSSDUG00000001887	pum3	99	44.593	ENSPEMG00000019340	-	88	46.990	Peromyscus_maniculatus_bairdii
ENSSDUG00000001887	pum3	80	61.351	ENSPCIG00000030598	PUM3	72	61.351	Phascolarctos_cinereus
ENSSDUG00000001887	pum3	99	69.683	ENSPFOG00000001719	pum3	100	69.231	Poecilia_formosa
ENSSDUG00000001887	pum3	99	72.247	ENSPLAG00000020010	pum3	100	71.795	Poecilia_latipinna
ENSSDUG00000001887	pum3	99	71.946	ENSPMEG00000017451	pum3	100	71.493	Poecilia_mexicana
ENSSDUG00000001887	pum3	69	62.500	ENSPREG00000019478	-	74	59.857	Poecilia_reticulata
ENSSDUG00000001887	pum3	99	54.586	ENSPPYG00000019255	PUM3	89	59.129	Pongo_abelii
ENSSDUG00000001887	pum3	97	49.085	ENSPCAG00000005797	PUM3	89	51.071	Procavia_capensis
ENSSDUG00000001887	pum3	99	53.608	ENSPCOG00000027325	PUM3	91	57.401	Propithecus_coquereli
ENSSDUG00000001887	pum3	99	54.734	ENSPVAG00000016135	PUM3	78	63.296	Pteropus_vampyrus
ENSSDUG00000001887	pum3	99	80.572	ENSPNYG00000016124	pum3	100	80.120	Pundamilia_nyererei
ENSSDUG00000001887	pum3	96	62.150	ENSPNAG00000026524	pum3	99	59.970	Pygocentrus_nattereri
ENSSDUG00000001887	pum3	94	55.818	ENSRNOG00000012574	Pum3	96	56.704	Rattus_norvegicus
ENSSDUG00000001887	pum3	94	55.503	ENSRNOG00000048356	RGD1308750	96	56.381	Rattus_norvegicus
ENSSDUG00000001887	pum3	79	62.808	ENSRBIG00000036924	PUM3	91	57.895	Rhinopithecus_bieti
ENSSDUG00000001887	pum3	79	62.808	ENSRROG00000041089	PUM3	91	57.895	Rhinopithecus_roxellana
ENSSDUG00000001887	pum3	99	54.653	ENSSBOG00000028066	PUM3	92	57.724	Saimiri_boliviensis_boliviensis
ENSSDUG00000001887	pum3	99	51.176	ENSSHAG00000003730	PUM3	99	53.824	Sarcophilus_harrisii
ENSSDUG00000001887	pum3	99	61.654	ENSSFOG00015018778	pum3	92	64.815	Scleropages_formosus
ENSSDUG00000001887	pum3	100	87.500	ENSSMAG00000013236	pum3	100	87.801	Scophthalmus_maximus
ENSSDUG00000001887	pum3	100	97.741	ENSSLDG00000015766	pum3	100	97.741	Seriola_lalandi_dorsalis
ENSSDUG00000001887	pum3	91	53.960	ENSSARG00000000579	PUM3	96	54.085	Sorex_araneus
ENSSDUG00000001887	pum3	87	58.824	ENSSPUG00000001707	PUM3	99	53.914	Sphenodon_punctatus
ENSSDUG00000001887	pum3	99	83.886	ENSSPAG00000003976	pum3	100	83.584	Stegastes_partitus
ENSSDUG00000001887	pum3	97	56.192	ENSSSCG00000005227	PUM3	99	54.627	Sus_scrofa
ENSSDUG00000001887	pum3	94	56.221	ENSTGUG00000005339	PUM3	88	60.208	Taeniopygia_guttata
ENSSDUG00000001887	pum3	99	80.660	ENSTRUG00000004074	pum3	99	80.360	Takifugu_rubripes
ENSSDUG00000001887	pum3	99	76.586	ENSTNIG00000010325	pum3	99	75.415	Tetraodon_nigroviridis
ENSSDUG00000001887	pum3	79	46.591	ENSTBEG00000013058	PUM3	82	46.642	Tupaia_belangeri
ENSSDUG00000001887	pum3	97	50.850	ENSTTRG00000001062	PUM3	88	52.138	Tursiops_truncatus
ENSSDUG00000001887	pum3	80	58.491	ENSUMAG00000018443	PUM3	99	58.491	Ursus_maritimus
ENSSDUG00000001887	pum3	99	55.081	ENSVPAG00000010766	PUM3	91	57.423	Vicugna_pacos
ENSSDUG00000001887	pum3	79	62.357	ENSVVUG00000006527	PUM3	89	58.221	Vulpes_vulpes
ENSSDUG00000001887	pum3	93	47.343	ENSXETG00000011707	pum3	91	49.010	Xenopus_tropicalis
ENSSDUG00000001887	pum3	93	70.989	ENSXCOG00000006725	pum3	98	70.724	Xiphophorus_couchianus
ENSSDUG00000001887	pum3	99	71.342	ENSXMAG00000002926	pum3	100	70.890	Xiphophorus_maculatus