EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002033 (Gene tree)
Gene ID: 111235105
Gene Symbol: zgc:56699
Alias: -
Full Name: gametocyte-specific factor 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3489 bases
Position: chrBDQW01000468.1:1580448-1583936
Accession: 111235105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002640	zf-U11-48K	PF05253.12	3e-20	1	2
ENSSDUP00000002640	zf-U11-48K	PF05253.12	3e-20	2	2
ENSSDUP00000002622	zf-U11-48K	PF05253.12	4.8e-20	1	2
ENSSDUP00000002622	zf-U11-48K	PF05253.12	4.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002713	-	459	-	ENSSDUP00000002640	152 (aa)	-	-
ENSSDUT00000002695	-	749	XM_022763433	ENSSDUP00000002622	180 (aa)	XP_022619154	UPI000BBE4D32

Gene Model

Click here to download ENSSDUG00000002033's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002033	zgc:56699	79	67.832	ENSAPOG00000000311	-	80	67.832	Acanthochromis_polyacanthus
ENSSDUG00000002033	zgc:56699	96	58.721	ENSAPOG00000021951	-	97	58.721	Acanthochromis_polyacanthus
ENSSDUG00000002033	zgc:56699	99	67.598	ENSACIG00000013400	zgc:56699	99	67.598	Amphilophus_citrinellus
ENSSDUG00000002033	zgc:56699	96	61.628	ENSAOCG00000013650	-	97	61.628	Amphiprion_ocellaris
ENSSDUG00000002033	zgc:56699	95	61.806	ENSAPEG00000006689	zgc:56699	95	61.806	Amphiprion_percula
ENSSDUG00000002033	zgc:56699	100	81.667	ENSATEG00000024058	zgc:56699	100	81.667	Anabas_testudineus
ENSSDUG00000002033	zgc:56699	99	67.778	ENSACLG00000023562	zgc:56699	92	67.778	Astatotilapia_calliptera
ENSSDUG00000002033	zgc:56699	97	57.222	ENSAMXG00000038346	zgc:56699	99	57.222	Astyanax_mexicanus
ENSSDUG00000002033	zgc:56699	83	55.484	ENSAMXG00000036095	-	65	55.484	Astyanax_mexicanus
ENSSDUG00000002033	zgc:56699	97	65.714	ENSCSEG00000021520	zgc:56699	83	65.714	Cynoglossus_semilaevis
ENSSDUG00000002033	zgc:56699	83	62.000	ENSCVAG00000009972	zgc:56699	78	62.000	Cyprinodon_variegatus
ENSSDUG00000002033	zgc:56699	96	49.721	ENSDARG00000000887	zgc:56699	98	49.721	Danio_rerio
ENSSDUG00000002033	zgc:56699	80	52.703	ENSDARG00000099586	CR382383.2	83	52.703	Danio_rerio
ENSSDUG00000002033	zgc:56699	64	48.485	ENSEBUG00000005577	-	62	45.378	Eptatretus_burgeri
ENSSDUG00000002033	zgc:56699	96	57.542	ENSELUG00000003242	gtsf1	98	57.542	Esox_lucius
ENSSDUG00000002033	zgc:56699	98	69.799	ENSFHEG00000006036	zgc:56699	98	69.799	Fundulus_heteroclitus
ENSSDUG00000002033	zgc:56699	79	70.000	ENSGMOG00000007295	zgc:56699	99	70.000	Gadus_morhua
ENSSDUG00000002033	zgc:56699	61	47.826	ENSGALG00000035365	-	65	47.826	Gallus_gallus
ENSSDUG00000002033	zgc:56699	98	69.492	ENSGAFG00000020743	zgc:56699	99	69.492	Gambusia_affinis
ENSSDUG00000002033	zgc:56699	99	67.778	ENSHBUG00000005327	zgc:56699	100	67.778	Haplochromis_burtoni
ENSSDUG00000002033	zgc:56699	96	52.571	ENSHCOG00000010296	-	99	52.571	Hippocampus_comes
ENSSDUG00000002033	zgc:56699	96	50.838	ENSIPUG00000011498	zgc:56699	95	50.838	Ictalurus_punctatus
ENSSDUG00000002033	zgc:56699	97	75.429	ENSLBEG00000015981	zgc:56699	100	74.830	Labrus_bergylta
ENSSDUG00000002033	zgc:56699	78	49.645	ENSLOCG00000004469	zgc:56699	97	49.645	Lepisosteus_oculatus
ENSSDUG00000002033	zgc:56699	99	73.034	ENSMAMG00000001846	zgc:56699	99	73.034	Mastacembelus_armatus
ENSSDUG00000002033	zgc:56699	99	67.778	ENSMZEG00005026479	zgc:56699	92	67.778	Maylandia_zebra
ENSSDUG00000002033	zgc:56699	99	52.356	ENSMMOG00000017331	zgc:56699	99	52.356	Mola_mola
ENSSDUG00000002033	zgc:56699	99	67.222	ENSNBRG00000006336	zgc:56699	100	67.222	Neolamprologus_brichardi
ENSSDUG00000002033	zgc:56699	99	67.778	ENSONIG00000016720	zgc:56699	92	67.778	Oreochromis_niloticus
ENSSDUG00000002033	zgc:56699	61	40.708	ENSOANG00000030381	-	74	40.708	Ornithorhynchus_anatinus
ENSSDUG00000002033	zgc:56699	99	55.000	ENSORLG00000015258	-	99	55.000	Oryzias_latipes
ENSSDUG00000002033	zgc:56699	93	55.689	ENSORLG00000025877	-	99	55.689	Oryzias_latipes
ENSSDUG00000002033	zgc:56699	99	54.444	ENSORLG00020010990	-	99	54.444	Oryzias_latipes_hni
ENSSDUG00000002033	zgc:56699	93	55.689	ENSORLG00020011013	-	99	55.689	Oryzias_latipes_hni
ENSSDUG00000002033	zgc:56699	99	54.444	ENSORLG00015004961	zgc:56699	99	54.444	Oryzias_latipes_hsok
ENSSDUG00000002033	zgc:56699	99	61.236	ENSOMEG00000021773	-	99	61.236	Oryzias_melastigma
ENSSDUG00000002033	zgc:56699	99	56.983	ENSOMEG00000021739	-	99	56.983	Oryzias_melastigma
ENSSDUG00000002033	zgc:56699	90	46.099	ENSOMEG00000013200	-	92	53.793	Oryzias_melastigma
ENSSDUG00000002033	zgc:56699	96	48.295	ENSPKIG00000017039	zgc:56699	98	48.295	Paramormyrops_kingsleyae
ENSSDUG00000002033	zgc:56699	98	68.456	ENSPMGG00000023241	zgc:56699	99	68.456	Periophthalmus_magnuspinnatus
ENSSDUG00000002033	zgc:56699	62	43.333	ENSPMAG00000009653	-	93	43.333	Petromyzon_marinus
ENSSDUG00000002033	zgc:56699	52	37.975	ENSPCIG00000006734	-	99	37.975	Phascolarctos_cinereus
ENSSDUG00000002033	zgc:56699	98	69.492	ENSPFOG00000009204	zgc:56699	99	69.492	Poecilia_formosa
ENSSDUG00000002033	zgc:56699	97	68.919	ENSPLAG00000009088	zgc:56699	98	68.919	Poecilia_latipinna
ENSSDUG00000002033	zgc:56699	98	69.492	ENSPMEG00000001443	zgc:56699	99	69.492	Poecilia_mexicana
ENSSDUG00000002033	zgc:56699	98	70.056	ENSPREG00000000745	zgc:56699	99	70.056	Poecilia_reticulata
ENSSDUG00000002033	zgc:56699	99	67.778	ENSPNYG00000002811	zgc:56699	100	67.778	Pundamilia_nyererei
ENSSDUG00000002033	zgc:56699	96	60.112	ENSPNAG00000005165	zgc:56699	98	60.112	Pygocentrus_nattereri
ENSSDUG00000002033	zgc:56699	98	53.073	ENSSFOG00015021600	zgc:56699	99	53.073	Scleropages_formosus
ENSSDUG00000002033	zgc:56699	99	69.274	ENSSMAG00000020886	zgc:56699	99	69.274	Scophthalmus_maximus
ENSSDUG00000002033	zgc:56699	100	99.342	ENSSLDG00000014113	zgc:56699	100	99.342	Seriola_lalandi_dorsalis
ENSSDUG00000002033	zgc:56699	84	56.410	ENSSPAG00000010005	-	99	56.410	Stegastes_partitus
ENSSDUG00000002033	zgc:56699	96	69.767	ENSSPAG00000019854	-	97	70.349	Stegastes_partitus
ENSSDUG00000002033	zgc:56699	98	57.062	ENSTRUG00000015537	zgc:56699	99	57.062	Takifugu_rubripes
ENSSDUG00000002033	zgc:56699	81	60.959	ENSTNIG00000012515	zgc:56699	97	60.959	Tetraodon_nigroviridis
ENSSDUG00000002033	zgc:56699	97	64.571	ENSXCOG00000014400	zgc:56699	87	64.571	Xiphophorus_couchianus
ENSSDUG00000002033	zgc:56699	97	70.857	ENSXMAG00000011692	zgc:56699	98	70.857	Xiphophorus_maculatus