EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002051 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3226 bases
Position: chrBDQW01007657.1:9808-13033
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002660	ARS2	PF04959.13	9.7e-68	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002733	-	1368	-	ENSSDUP00000002660	455 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002051's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002051's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002051	-	93	56.103	ENSSDUG00000012049	srrt	54	55.932

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002051	-	93	55.032	ENSG00000087087	SRRT	95	54.357	Homo_sapiens
ENSSDUG00000002051	-	93	56.237	ENSAPOG00000002304	srrt	55	53.196	Acanthochromis_polyacanthus
ENSSDUG00000002051	-	93	55.508	ENSAMEG00000014506	SRRT	53	54.812	Ailuropoda_melanoleuca
ENSSDUG00000002051	-	93	56.025	ENSACIG00000015795	srrt	57	55.230	Amphilophus_citrinellus
ENSSDUG00000002051	-	95	73.941	ENSAOCG00000009189	-	53	75.212	Amphiprion_ocellaris
ENSSDUG00000002051	-	93	56.237	ENSAOCG00000009693	srrt	57	55.439	Amphiprion_ocellaris
ENSSDUG00000002051	-	93	55.579	ENSAPEG00000003646	srrt	58	54.979	Amphiprion_percula
ENSSDUG00000002051	-	95	73.729	ENSAPEG00000020016	-	53	75.000	Amphiprion_percula
ENSSDUG00000002051	-	93	55.246	ENSATEG00000014425	srrt	55	55.085	Anabas_testudineus
ENSSDUG00000002051	-	96	73.849	ENSATEG00000003652	-	87	76.160	Anabas_testudineus
ENSSDUG00000002051	-	95	54.140	ENSACAG00000001014	SRRT	53	54.989	Anolis_carolinensis
ENSSDUG00000002051	-	93	54.219	ENSANAG00000031718	SRRT	55	53.579	Aotus_nancymaae
ENSSDUG00000002051	-	96	72.131	ENSACLG00000009423	-	53	73.305	Astatotilapia_calliptera
ENSSDUG00000002051	-	93	55.603	ENSACLG00000013156	srrt	50	54.757	Astatotilapia_calliptera
ENSSDUG00000002051	-	92	54.936	ENSAMXG00000016671	srrt	52	53.734	Astyanax_mexicanus
ENSSDUG00000002051	-	93	54.219	ENSBTAG00000001134	SRRT	54	53.814	Bos_taurus
ENSSDUG00000002051	-	75	37.401	WBGene00017085	E01A2.2	85	35.760	Caenorhabditis_elegans
ENSSDUG00000002051	-	93	54.219	ENSCJAG00000014917	SRRT	55	53.783	Callithrix_jacchus
ENSSDUG00000002051	-	93	54.008	ENSCAFG00000023538	SRRT	54	53.402	Canis_familiaris
ENSSDUG00000002051	-	93	55.895	ENSCAFG00020013358	SRRT	53	55.224	Canis_lupus_dingo
ENSSDUG00000002051	-	93	54.430	ENSCHIG00000010495	SRRT	55	54.021	Capra_hircus
ENSSDUG00000002051	-	93	54.797	ENSTSYG00000036426	SRRT	58	54.021	Carlito_syrichta
ENSSDUG00000002051	-	93	55.724	ENSCAPG00000013586	SRRT	93	53.469	Cavia_aperea
ENSSDUG00000002051	-	93	54.316	ENSCPOG00000001739	SRRT	55	52.857	Cavia_porcellus
ENSSDUG00000002051	-	93	54.219	ENSCCAG00000015877	SRRT	55	53.579	Cebus_capucinus
ENSSDUG00000002051	-	93	54.681	ENSCATG00000036306	SRRT	55	54.021	Cercocebus_atys
ENSSDUG00000002051	-	93	54.622	ENSCLAG00000007568	SRRT	92	53.157	Chinchilla_lanigera
ENSSDUG00000002051	-	93	54.219	ENSCSAG00000017996	SRRT	55	53.579	Chlorocebus_sabaeus
ENSSDUG00000002051	-	94	40.417	ENSCING00000003506	-	55	40.249	Ciona_intestinalis
ENSSDUG00000002051	-	100	40.202	ENSCSAVG00000008394	-	57	44.857	Ciona_savignyi
ENSSDUG00000002051	-	93	54.681	ENSCANG00000034556	SRRT	55	54.021	Colobus_angolensis_palliatus
ENSSDUG00000002051	-	93	54.008	ENSCGRG00001001594	Srrt	55	53.157	Cricetulus_griseus_chok1gshd
ENSSDUG00000002051	-	93	54.202	ENSCGRG00000007292	Srrt	92	53.347	Cricetulus_griseus_crigri
ENSSDUG00000002051	-	93	55.507	ENSCSEG00000017878	srrt	50	56.209	Cynoglossus_semilaevis
ENSSDUG00000002051	-	96	72.363	ENSCSEG00000005233	-	55	72.766	Cynoglossus_semilaevis
ENSSDUG00000002051	-	89	72.927	ENSCVAG00000017344	-	51	67.523	Cyprinodon_variegatus
ENSSDUG00000002051	-	93	56.051	ENSCVAG00000019848	srrt	55	55.202	Cyprinodon_variegatus
ENSSDUG00000002051	-	94	56.000	ENSDARG00000017762	srrt	52	56.173	Danio_rerio
ENSSDUG00000002051	-	93	54.219	ENSDNOG00000003851	SRRT	55	53.579	Dasypus_novemcinctus
ENSSDUG00000002051	-	93	55.224	ENSDORG00000005584	Srrt	92	55.094	Dipodomys_ordii
ENSSDUG00000002051	-	93	51.867	ENSETEG00000016175	SRRT	55	51.724	Echinops_telfairi
ENSSDUG00000002051	-	95	51.464	ENSEBUG00000008517	-	67	50.412	Eptatretus_burgeri
ENSSDUG00000002051	-	93	54.219	ENSEASG00005016956	SRRT	55	53.579	Equus_asinus_asinus
ENSSDUG00000002051	-	93	54.219	ENSECAG00000012292	SRRT	55	53.579	Equus_caballus
ENSSDUG00000002051	-	94	56.025	ENSELUG00000006651	srrt	52	56.173	Esox_lucius
ENSSDUG00000002051	-	95	60.996	ENSELUG00000021216	-	54	60.656	Esox_lucius
ENSSDUG00000002051	-	93	54.219	ENSFCAG00000006855	SRRT	55	53.579	Felis_catus
ENSSDUG00000002051	-	93	57.044	ENSFDAG00000021347	SRRT	92	56.027	Fukomys_damarensis
ENSSDUG00000002051	-	96	69.729	ENSFHEG00000004105	-	96	69.665	Fundulus_heteroclitus
ENSSDUG00000002051	-	95	53.503	ENSFHEG00000002756	srrt	53	60.250	Fundulus_heteroclitus
ENSSDUG00000002051	-	80	70.896	ENSGMOG00000018694	-	55	63.136	Gadus_morhua
ENSSDUG00000002051	-	94	53.173	ENSGMOG00000018619	srrt	51	54.466	Gadus_morhua
ENSSDUG00000002051	-	93	56.867	ENSGAFG00000005423	srrt	53	55.417	Gambusia_affinis
ENSSDUG00000002051	-	94	64.224	ENSGAFG00000020383	-	55	64.195	Gambusia_affinis
ENSSDUG00000002051	-	99	53.162	ENSGACG00000020387	srrt	52	54.105	Gasterosteus_aculeatus
ENSSDUG00000002051	-	96	65.546	ENSGACG00000001100	-	53	67.373	Gasterosteus_aculeatus
ENSSDUG00000002051	-	93	54.681	ENSGGOG00000001508	SRRT	55	54.021	Gorilla_gorilla
ENSSDUG00000002051	-	93	55.603	ENSHBUG00000002942	srrt	50	54.757	Haplochromis_burtoni
ENSSDUG00000002051	-	93	54.622	ENSHGLG00000008344	Srrt	93	53.157	Heterocephalus_glaber_female
ENSSDUG00000002051	-	93	55.106	ENSHGLG00100018857	Srrt	92	53.608	Heterocephalus_glaber_male
ENSSDUG00000002051	-	99	54.141	ENSHCOG00000005403	srrt	56	55.252	Hippocampus_comes
ENSSDUG00000002051	-	95	65.665	ENSHCOG00000008904	-	56	65.806	Hippocampus_comes
ENSSDUG00000002051	-	94	56.568	ENSIPUG00000021150	srrt	51	56.356	Ictalurus_punctatus
ENSSDUG00000002051	-	93	54.681	ENSSTOG00000013776	SRRT	55	53.814	Ictidomys_tridecemlineatus
ENSSDUG00000002051	-	93	55.626	ENSJJAG00000010446	Srrt	92	55.144	Jaculus_jaculus
ENSSDUG00000002051	-	97	53.306	ENSKMAG00000013599	srrt	55	55.297	Kryptolebias_marmoratus
ENSSDUG00000002051	-	96	68.583	ENSKMAG00000008468	-	54	68.944	Kryptolebias_marmoratus
ENSSDUG00000002051	-	93	55.021	ENSLBEG00000016308	srrt	54	54.886	Labrus_bergylta
ENSSDUG00000002051	-	93	51.082	ENSLOCG00000013658	srrt	53	51.709	Lepisosteus_oculatus
ENSSDUG00000002051	-	93	54.008	ENSLAFG00000007725	SRRT	54	53.814	Loxodonta_africana
ENSSDUG00000002051	-	93	54.681	ENSMFAG00000033745	SRRT	58	52.716	Macaca_fascicularis
ENSSDUG00000002051	-	93	54.219	ENSMMUG00000021255	SRRT	55	53.579	Macaca_mulatta
ENSSDUG00000002051	-	93	54.219	ENSMNEG00000041864	SRRT	56	52.716	Macaca_nemestrina
ENSSDUG00000002051	-	93	54.681	ENSMLEG00000029479	SRRT	57	52.716	Mandrillus_leucophaeus
ENSSDUG00000002051	-	96	74.580	ENSMAMG00000010681	-	53	75.847	Mastacembelus_armatus
ENSSDUG00000002051	-	93	54.839	ENSMAMG00000014311	srrt	52	55.532	Mastacembelus_armatus
ENSSDUG00000002051	-	93	55.603	ENSMZEG00005016135	srrt	50	54.757	Maylandia_zebra
ENSSDUG00000002051	-	96	72.689	ENSMZEG00005028002	-	53	73.305	Maylandia_zebra
ENSSDUG00000002051	-	93	54.852	ENSMAUG00000011386	Srrt	92	53.846	Mesocricetus_auratus
ENSSDUG00000002051	-	93	54.219	ENSMICG00000009471	SRRT	56	52.716	Microcebus_murinus
ENSSDUG00000002051	-	93	54.641	ENSMOCG00000001971	Srrt	92	53.988	Microtus_ochrogaster
ENSSDUG00000002051	-	94	72.570	ENSMMOG00000011137	-	55	72.354	Mola_mola
ENSSDUG00000002051	-	100	53.157	ENSMMOG00000016399	srrt	54	54.526	Mola_mola
ENSSDUG00000002051	-	93	52.842	ENSMODG00000004862	SRRT	93	52.121	Monodelphis_domestica
ENSSDUG00000002051	-	93	53.744	ENSMALG00000018604	srrt	55	52.137	Monopterus_albus
ENSSDUG00000002051	-	99	64.286	ENSMALG00000005567	-	86	67.249	Monopterus_albus
ENSSDUG00000002051	-	93	55.292	MGP_CAROLIEiJ_G0027870	Srrt	90	60.082	Mus_caroli
ENSSDUG00000002051	-	93	55.292	ENSMUSG00000037364	Srrt	90	60.082	Mus_musculus
ENSSDUG00000002051	-	93	55.292	MGP_PahariEiJ_G0024456	Srrt	90	60.082	Mus_pahari
ENSSDUG00000002051	-	93	55.292	MGP_SPRETEiJ_G0028875	Srrt	90	60.082	Mus_spretus
ENSSDUG00000002051	-	93	54.219	ENSMPUG00000015839	SRRT	55	53.579	Mustela_putorius_furo
ENSSDUG00000002051	-	93	53.165	ENSMLUG00000009975	SRRT	54	52.784	Myotis_lucifugus
ENSSDUG00000002051	-	93	54.008	ENSNGAG00000023715	Srrt	66	53.374	Nannospalax_galili
ENSSDUG00000002051	-	93	55.150	ENSNBRG00000019100	srrt	52	55.224	Neolamprologus_brichardi
ENSSDUG00000002051	-	91	46.638	ENSNLEG00000011987	SRRT	55	42.292	Nomascus_leucogenys
ENSSDUG00000002051	-	93	44.850	ENSMEUG00000011941	SRRT	53	44.561	Notamacropus_eugenii
ENSSDUG00000002051	-	80	55.012	ENSOPRG00000002502	-	50	54.523	Ochotona_princeps
ENSSDUG00000002051	-	93	55.508	ENSODEG00000016856	SRRT	92	53.608	Octodon_degus
ENSSDUG00000002051	-	96	73.278	ENSONIG00000016080	-	53	73.474	Oreochromis_niloticus
ENSSDUG00000002051	-	93	55.603	ENSONIG00000004242	srrt	52	53.799	Oreochromis_niloticus
ENSSDUG00000002051	-	98	55.441	ENSORLG00000008120	srrt	52	55.650	Oryzias_latipes
ENSSDUG00000002051	-	99	54.379	ENSORLG00020003058	srrt	52	55.437	Oryzias_latipes_hni
ENSSDUG00000002051	-	98	55.441	ENSORLG00015008062	srrt	52	55.650	Oryzias_latipes_hsok
ENSSDUG00000002051	-	93	56.681	ENSOMEG00000003155	srrt	57	55.864	Oryzias_melastigma
ENSSDUG00000002051	-	95	70.085	ENSOMEG00000006963	-	55	70.042	Oryzias_melastigma
ENSSDUG00000002051	-	93	54.219	ENSOGAG00000017242	SRRT	55	53.579	Otolemur_garnettii
ENSSDUG00000002051	-	93	54.681	ENSOARG00000015645	SRRT	55	53.049	Ovis_aries
ENSSDUG00000002051	-	93	54.681	ENSPPAG00000041090	SRRT	55	54.021	Pan_paniscus
ENSSDUG00000002051	-	93	54.915	ENSPPRG00000009557	SRRT	54	53.830	Panthera_pardus
ENSSDUG00000002051	-	93	54.219	ENSPTIG00000014355	SRRT	55	53.579	Panthera_tigris_altaica
ENSSDUG00000002051	-	93	54.681	ENSPTRG00000019511	SRRT	55	54.021	Pan_troglodytes
ENSSDUG00000002051	-	93	53.320	ENSPANG00000020763	SRRT	56	52.716	Papio_anubis
ENSSDUG00000002051	-	93	54.624	ENSPKIG00000022212	-	54	54.622	Paramormyrops_kingsleyae
ENSSDUG00000002051	-	99	54.397	ENSPKIG00000005434	srrt	55	53.958	Paramormyrops_kingsleyae
ENSSDUG00000002051	-	93	54.348	ENSPSIG00000016311	SRRT	52	54.230	Pelodiscus_sinensis
ENSSDUG00000002051	-	93	53.684	ENSPMGG00000002841	srrt	56	54.375	Periophthalmus_magnuspinnatus
ENSSDUG00000002051	-	94	55.297	ENSPEMG00000010834	Srrt	92	54.639	Peromyscus_maniculatus_bairdii
ENSSDUG00000002051	-	99	48.713	ENSPMAG00000009614	-	56	49.064	Petromyzon_marinus
ENSSDUG00000002051	-	93	53.249	ENSPCIG00000000816	SRRT	55	52.738	Phascolarctos_cinereus
ENSSDUG00000002051	-	93	57.296	ENSPFOG00000005704	srrt	52	56.476	Poecilia_formosa
ENSSDUG00000002051	-	94	65.086	ENSPFOG00000016554	-	56	65.678	Poecilia_formosa
ENSSDUG00000002051	-	94	64.946	ENSPLAG00000004526	-	56	65.116	Poecilia_latipinna
ENSSDUG00000002051	-	93	56.438	ENSPLAG00000021992	srrt	51	55.202	Poecilia_latipinna
ENSSDUG00000002051	-	88	63.719	ENSPMEG00000001520	-	52	63.721	Poecilia_mexicana
ENSSDUG00000002051	-	93	56.867	ENSPMEG00000001182	srrt	57	55.789	Poecilia_mexicana
ENSSDUG00000002051	-	93	57.511	ENSPREG00000022308	srrt	52	56.688	Poecilia_reticulata
ENSSDUG00000002051	-	75	52.229	ENSPPYG00000017432	SRRT	50	50.955	Pongo_abelii
ENSSDUG00000002051	-	93	52.439	ENSPCAG00000001621	SRRT	55	50.696	Procavia_capensis
ENSSDUG00000002051	-	93	54.681	ENSPCOG00000025751	SRRT	55	54.021	Propithecus_coquereli
ENSSDUG00000002051	-	93	52.743	ENSPVAG00000000834	SRRT	71	52.147	Pteropus_vampyrus
ENSSDUG00000002051	-	93	55.603	ENSPNYG00000018710	srrt	52	54.757	Pundamilia_nyererei
ENSSDUG00000002051	-	93	53.165	ENSRNOG00000048277	AABR07035787.1	95	53.209	Rattus_norvegicus
ENSSDUG00000002051	-	93	54.219	ENSRBIG00000035718	SRRT	56	52.716	Rhinopithecus_bieti
ENSSDUG00000002051	-	93	54.219	ENSRROG00000030622	SRRT	57	52.716	Rhinopithecus_roxellana
ENSSDUG00000002051	-	93	54.681	ENSSBOG00000033570	SRRT	55	54.021	Saimiri_boliviensis_boliviensis
ENSSDUG00000002051	-	98	52.096	ENSSHAG00000007349	-	76	52.546	Sarcophilus_harrisii
ENSSDUG00000002051	-	93	57.298	ENSSFOG00015017293	srrt	52	56.842	Scleropages_formosus
ENSSDUG00000002051	-	94	71.002	ENSSMAG00000018195	-	58	73.375	Scophthalmus_maximus
ENSSDUG00000002051	-	93	56.356	ENSSMAG00000015342	srrt	55	56.184	Scophthalmus_maximus
ENSSDUG00000002051	-	93	55.794	ENSSLDG00000017477	srrt	54	55.626	Seriola_lalandi_dorsalis
ENSSDUG00000002051	-	93	55.462	ENSSPAG00000005665	srrt	51	54.678	Stegastes_partitus
ENSSDUG00000002051	-	94	71.861	ENSSPAG00000018943	-	95	73.617	Stegastes_partitus
ENSSDUG00000002051	-	90	67.028	ENSTRUG00000000023	-	52	66.964	Takifugu_rubripes
ENSSDUG00000002051	-	93	52.521	ENSTRUG00000016075	srrt	53	53.209	Takifugu_rubripes
ENSSDUG00000002051	-	98	67.490	ENSTNIG00000003111	-	54	69.556	Tetraodon_nigroviridis
ENSSDUG00000002051	-	71	70.732	ENSTNIG00000019765	-	98	71.605	Tetraodon_nigroviridis
ENSSDUG00000002051	-	93	52.500	ENSTNIG00000011779	srrt	73	53.074	Tetraodon_nigroviridis
ENSSDUG00000002051	-	93	54.219	ENSTTRG00000011104	SRRT	54	53.814	Tursiops_truncatus
ENSSDUG00000002051	-	93	54.219	ENSUAMG00000027997	SRRT	56	53.579	Ursus_americanus
ENSSDUG00000002051	-	93	54.219	ENSUMAG00000011295	SRRT	55	53.579	Ursus_maritimus
ENSSDUG00000002051	-	93	54.008	ENSVVUG00000023572	SRRT	54	53.402	Vulpes_vulpes
ENSSDUG00000002051	-	93	50.531	ENSXETG00000025124	srrt	54	50.417	Xenopus_tropicalis
ENSSDUG00000002051	-	96	66.372	ENSXCOG00000013105	-	93	66.519	Xiphophorus_couchianus
ENSSDUG00000002051	-	93	57.082	ENSXMAG00000007627	srrt	57	55.789	Xiphophorus_maculatus
ENSSDUG00000002051	-	94	64.871	ENSXMAG00000002090	-	55	65.890	Xiphophorus_maculatus