EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002078 (Gene tree)
Gene ID: 111238257
Gene Symbol: mrpl4
Alias: si:dkey-23f9.3|zgc:110034|zgmrpl4
Full Name: mitochondrial ribosomal protein L4
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 12684 bases
Position: chrBDQW01001246.1:580408-593091
Accession: 111238257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002693	Ribosomal_L4	PF00573.22	2.9e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002766	-	4337	XM_022767687	ENSSDUP00000002693	302 (aa)	XP_022623408	UPI000BBE3301

Gene Model

Click here to download ENSSDUG00000002078's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002078's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002078	mrpl4	82	69.880	ENSG00000105364	MRPL4	100	73.950	Homo_sapiens
ENSSDUG00000002078	mrpl4	100	91.722	ENSAPOG00000010156	mrpl4	100	91.722	Acanthochromis_polyacanthus
ENSSDUG00000002078	mrpl4	82	69.076	ENSAMEG00000011808	MRPL4	85	69.076	Ailuropoda_melanoleuca
ENSSDUG00000002078	mrpl4	99	88.079	ENSACIG00000011523	mrpl4	99	88.079	Amphilophus_citrinellus
ENSSDUG00000002078	mrpl4	95	92.683	ENSAOCG00000018507	mrpl4	89	92.683	Amphiprion_ocellaris
ENSSDUG00000002078	mrpl4	100	93.046	ENSAPEG00000006208	mrpl4	100	93.046	Amphiprion_percula
ENSSDUG00000002078	mrpl4	100	91.060	ENSATEG00000021694	mrpl4	100	91.060	Anabas_testudineus
ENSSDUG00000002078	mrpl4	100	65.563	ENSACAG00000008232	MRPL4	100	65.563	Anolis_carolinensis
ENSSDUG00000002078	mrpl4	82	69.880	ENSANAG00000025428	MRPL4	87	69.880	Aotus_nancymaae
ENSSDUG00000002078	mrpl4	100	89.404	ENSACLG00000017038	mrpl4	100	89.404	Astatotilapia_calliptera
ENSSDUG00000002078	mrpl4	99	71.761	ENSAMXG00000002236	mrpl4	99	71.761	Astyanax_mexicanus
ENSSDUG00000002078	mrpl4	76	43.723	WBGene00020717	mrpl-4	77	43.723	Caenorhabditis_elegans
ENSSDUG00000002078	mrpl4	82	68.675	ENSCJAG00000005764	MRPL4	85	68.675	Callithrix_jacchus
ENSSDUG00000002078	mrpl4	82	70.683	ENSCAFG00000017881	MRPL4	85	70.683	Canis_familiaris
ENSSDUG00000002078	mrpl4	82	70.683	ENSCAFG00020024405	MRPL4	83	70.683	Canis_lupus_dingo
ENSSDUG00000002078	mrpl4	89	67.528	ENSCHIG00000000516	MRPL4	92	67.528	Capra_hircus
ENSSDUG00000002078	mrpl4	84	69.291	ENSTSYG00000034805	MRPL4	86	69.291	Carlito_syrichta
ENSSDUG00000002078	mrpl4	67	71.782	ENSCAPG00000000036	MRPL4	100	71.782	Cavia_aperea
ENSSDUG00000002078	mrpl4	94	63.287	ENSCPOG00000006506	MRPL4	95	63.287	Cavia_porcellus
ENSSDUG00000002078	mrpl4	82	52.209	ENSCCAG00000036054	MRPL4	82	52.610	Cebus_capucinus
ENSSDUG00000002078	mrpl4	99	63.333	ENSCLAG00000004552	MRPL4	99	63.333	Chinchilla_lanigera
ENSSDUG00000002078	mrpl4	82	70.683	ENSCSAG00000007362	MRPL4	84	70.683	Chlorocebus_sabaeus
ENSSDUG00000002078	mrpl4	86	67.308	ENSCPBG00000005432	MRPL4	99	68.952	Chrysemys_picta_bellii
ENSSDUG00000002078	mrpl4	95	34.667	ENSCING00000003144	-	95	34.667	Ciona_intestinalis
ENSSDUG00000002078	mrpl4	99	32.895	ENSCSAVG00000007005	-	98	32.895	Ciona_savignyi
ENSSDUG00000002078	mrpl4	67	47.525	ENSCANG00000033167	MRPL4	50	47.525	Colobus_angolensis_palliatus
ENSSDUG00000002078	mrpl4	89	64.207	ENSCGRG00001013642	Mrpl4	92	64.207	Cricetulus_griseus_chok1gshd
ENSSDUG00000002078	mrpl4	89	64.207	ENSCGRG00000012922	Mrpl4	92	64.207	Cricetulus_griseus_crigri
ENSSDUG00000002078	mrpl4	100	84.106	ENSCSEG00000020580	mrpl4	100	84.106	Cynoglossus_semilaevis
ENSSDUG00000002078	mrpl4	50	79.470	ENSCVAG00000017296	mrpl4	87	79.394	Cyprinodon_variegatus
ENSSDUG00000002078	mrpl4	100	72.848	ENSDARG00000058824	mrpl4	100	72.848	Danio_rerio
ENSSDUG00000002078	mrpl4	88	59.925	ENSDNOG00000010139	-	93	59.925	Dasypus_novemcinctus
ENSSDUG00000002078	mrpl4	81	66.802	ENSDNOG00000044263	-	87	65.891	Dasypus_novemcinctus
ENSSDUG00000002078	mrpl4	82	69.478	ENSDORG00000003723	Mrpl4	98	69.478	Dipodomys_ordii
ENSSDUG00000002078	mrpl4	83	50.394	FBgn0001995	mRpL4	86	50.394	Drosophila_melanogaster
ENSSDUG00000002078	mrpl4	82	71.200	ENSETEG00000002009	MRPL4	90	67.910	Echinops_telfairi
ENSSDUG00000002078	mrpl4	81	64.228	ENSEBUG00000016597	mrpl4	80	64.228	Eptatretus_burgeri
ENSSDUG00000002078	mrpl4	93	65.018	ENSEASG00005010556	MRPL4	90	66.421	Equus_asinus_asinus
ENSSDUG00000002078	mrpl4	82	70.281	ENSECAG00000017013	MRPL4	83	70.281	Equus_caballus
ENSSDUG00000002078	mrpl4	82	49.194	ENSEEUG00000012011	MRPL4	83	49.398	Erinaceus_europaeus
ENSSDUG00000002078	mrpl4	100	77.152	ENSELUG00000010463	mrpl4	100	77.152	Esox_lucius
ENSSDUG00000002078	mrpl4	67	68.317	ENSFCAG00000043071	MRPL4	78	68.317	Felis_catus
ENSSDUG00000002078	mrpl4	75	67.556	ENSFDAG00000001936	MRPL4	100	67.556	Fukomys_damarensis
ENSSDUG00000002078	mrpl4	100	85.762	ENSFHEG00000003126	mrpl4	100	85.762	Fundulus_heteroclitus
ENSSDUG00000002078	mrpl4	94	79.930	ENSGMOG00000007229	mrpl4	100	79.930	Gadus_morhua
ENSSDUG00000002078	mrpl4	100	85.762	ENSGAFG00000018136	mrpl4	100	85.762	Gambusia_affinis
ENSSDUG00000002078	mrpl4	100	84.488	ENSGACG00000019808	mrpl4	100	84.158	Gasterosteus_aculeatus
ENSSDUG00000002078	mrpl4	100	63.245	ENSGAGG00000018010	MRPL4	100	63.245	Gopherus_agassizii
ENSSDUG00000002078	mrpl4	82	69.478	ENSGGOG00000036529	-	80	69.478	Gorilla_gorilla
ENSSDUG00000002078	mrpl4	100	89.404	ENSHBUG00000006332	mrpl4	100	89.404	Haplochromis_burtoni
ENSSDUG00000002078	mrpl4	99	62.333	ENSHGLG00000007839	MRPL4	99	62.333	Heterocephalus_glaber_female
ENSSDUG00000002078	mrpl4	88	67.037	ENSHGLG00100002720	MRPL4	97	67.037	Heterocephalus_glaber_male
ENSSDUG00000002078	mrpl4	94	74.035	ENSHCOG00000002016	mrpl4	96	74.035	Hippocampus_comes
ENSSDUG00000002078	mrpl4	100	71.192	ENSIPUG00000011705	mrpl4	96	71.192	Ictalurus_punctatus
ENSSDUG00000002078	mrpl4	61	70.270	ENSSTOG00000030121	MRPL4	93	70.270	Ictidomys_tridecemlineatus
ENSSDUG00000002078	mrpl4	82	67.470	ENSJJAG00000010573	Mrpl4	85	67.470	Jaculus_jaculus
ENSSDUG00000002078	mrpl4	100	84.768	ENSKMAG00000012769	mrpl4	99	84.768	Kryptolebias_marmoratus
ENSSDUG00000002078	mrpl4	100	88.742	ENSLBEG00000000848	mrpl4	100	88.742	Labrus_bergylta
ENSSDUG00000002078	mrpl4	99	67.110	ENSLACG00000009255	MRPL4	92	67.110	Latimeria_chalumnae
ENSSDUG00000002078	mrpl4	100	69.868	ENSLOCG00000016632	mrpl4	99	69.868	Lepisosteus_oculatus
ENSSDUG00000002078	mrpl4	97	63.140	ENSLAFG00000015366	MRPL4	96	63.140	Loxodonta_africana
ENSSDUG00000002078	mrpl4	82	70.281	ENSMFAG00000003526	MRPL4	80	70.281	Macaca_fascicularis
ENSSDUG00000002078	mrpl4	82	70.281	ENSMMUG00000001219	MRPL4	84	70.281	Macaca_mulatta
ENSSDUG00000002078	mrpl4	82	70.281	ENSMNEG00000040746	MRPL4	84	70.281	Macaca_nemestrina
ENSSDUG00000002078	mrpl4	82	59.843	ENSMLEG00000041712	MRPL4	83	59.843	Mandrillus_leucophaeus
ENSSDUG00000002078	mrpl4	100	87.748	ENSMAMG00000001736	mrpl4	100	87.748	Mastacembelus_armatus
ENSSDUG00000002078	mrpl4	100	89.404	ENSMZEG00005005809	mrpl4	100	89.404	Maylandia_zebra
ENSSDUG00000002078	mrpl4	89	64.207	ENSMAUG00000013451	Mrpl4	94	64.207	Mesocricetus_auratus
ENSSDUG00000002078	mrpl4	82	72.289	ENSMICG00000010267	MRPL4	83	72.289	Microcebus_murinus
ENSSDUG00000002078	mrpl4	100	61.386	ENSMOCG00000014755	Mrpl4	99	61.386	Microtus_ochrogaster
ENSSDUG00000002078	mrpl4	100	77.483	ENSMMOG00000013673	mrpl4	100	77.483	Mola_mola
ENSSDUG00000002078	mrpl4	82	74.597	ENSMODG00000005476	MRPL4	82	74.597	Monodelphis_domestica
ENSSDUG00000002078	mrpl4	99	83.987	ENSMALG00000002391	mrpl4	99	83.987	Monopterus_albus
ENSSDUG00000002078	mrpl4	87	67.045	MGP_CAROLIEiJ_G0031854	Mrpl4	90	67.045	Mus_caroli
ENSSDUG00000002078	mrpl4	87	67.424	ENSMUSG00000003299	Mrpl4	90	67.424	Mus_musculus
ENSSDUG00000002078	mrpl4	87	67.424	MGP_PahariEiJ_G0014720	Mrpl4	90	67.424	Mus_pahari
ENSSDUG00000002078	mrpl4	87	67.045	MGP_SPRETEiJ_G0032978	Mrpl4	90	67.045	Mus_spretus
ENSSDUG00000002078	mrpl4	82	69.478	ENSMPUG00000006825	MRPL4	85	69.478	Mustela_putorius_furo
ENSSDUG00000002078	mrpl4	85	69.650	ENSMLUG00000012280	MRPL4	100	69.650	Myotis_lucifugus
ENSSDUG00000002078	mrpl4	82	67.470	ENSNGAG00000014705	Mrpl4	88	67.470	Nannospalax_galili
ENSSDUG00000002078	mrpl4	100	89.404	ENSNBRG00000004804	mrpl4	100	89.404	Neolamprologus_brichardi
ENSSDUG00000002078	mrpl4	68	50.485	ENSNLEG00000012155	-	65	51.370	Nomascus_leucogenys
ENSSDUG00000002078	mrpl4	82	61.417	ENSMEUG00000002199	MRPL4	98	61.417	Notamacropus_eugenii
ENSSDUG00000002078	mrpl4	82	69.880	ENSOPRG00000005735	MRPL4	83	69.880	Ochotona_princeps
ENSSDUG00000002078	mrpl4	84	67.323	ENSODEG00000016194	MRPL4	88	67.323	Octodon_degus
ENSSDUG00000002078	mrpl4	100	89.073	ENSONIG00000000136	mrpl4	100	89.073	Oreochromis_niloticus
ENSSDUG00000002078	mrpl4	69	71.154	ENSOANG00000013891	MRPL4	100	71.154	Ornithorhynchus_anatinus
ENSSDUG00000002078	mrpl4	51	53.704	ENSOCUG00000029187	-	78	63.200	Oryctolagus_cuniculus
ENSSDUG00000002078	mrpl4	100	83.775	ENSORLG00000000085	mrpl4	96	83.775	Oryzias_latipes
ENSSDUG00000002078	mrpl4	100	84.106	ENSORLG00020020476	mrpl4	100	84.106	Oryzias_latipes_hni
ENSSDUG00000002078	mrpl4	100	83.444	ENSORLG00015020892	mrpl4	100	83.444	Oryzias_latipes_hsok
ENSSDUG00000002078	mrpl4	87	69.057	ENSOGAG00000011051	MRPL4	90	69.057	Otolemur_garnettii
ENSSDUG00000002078	mrpl4	76	72.414	ENSOARG00000015602	MRPL4	82	71.667	Ovis_aries
ENSSDUG00000002078	mrpl4	82	70.281	ENSPPAG00000041740	-	80	70.281	Pan_paniscus
ENSSDUG00000002078	mrpl4	67	68.812	ENSPPRG00000004312	MRPL4	80	68.812	Panthera_pardus
ENSSDUG00000002078	mrpl4	67	68.812	ENSPTIG00000010912	MRPL4	77	68.812	Panthera_tigris_altaica
ENSSDUG00000002078	mrpl4	82	69.880	ENSPTRG00000010462	MRPL4	80	69.880	Pan_troglodytes
ENSSDUG00000002078	mrpl4	82	70.683	ENSPANG00000001265	MRPL4	80	70.683	Papio_anubis
ENSSDUG00000002078	mrpl4	100	67.550	ENSPKIG00000008086	mrpl4	99	67.550	Paramormyrops_kingsleyae
ENSSDUG00000002078	mrpl4	95	80.420	ENSPMGG00000002329	mrpl4	99	80.634	Periophthalmus_magnuspinnatus
ENSSDUG00000002078	mrpl4	89	66.421	ENSPEMG00000017474	Mrpl4	92	66.421	Peromyscus_maniculatus_bairdii
ENSSDUG00000002078	mrpl4	80	68.724	ENSPMAG00000007691	mrpl4	95	68.724	Petromyzon_marinus
ENSSDUG00000002078	mrpl4	100	84.437	ENSPFOG00000013329	mrpl4	100	84.437	Poecilia_formosa
ENSSDUG00000002078	mrpl4	100	85.099	ENSPLAG00000012864	mrpl4	100	85.099	Poecilia_latipinna
ENSSDUG00000002078	mrpl4	100	84.437	ENSPMEG00000004937	mrpl4	100	84.437	Poecilia_mexicana
ENSSDUG00000002078	mrpl4	98	83.502	ENSPREG00000021621	mrpl4	99	85.971	Poecilia_reticulata
ENSSDUG00000002078	mrpl4	82	69.880	ENSPPYG00000009547	MRPL4	80	69.880	Pongo_abelii
ENSSDUG00000002078	mrpl4	69	62.500	ENSPCAG00000002385	MRPL4	86	62.500	Procavia_capensis
ENSSDUG00000002078	mrpl4	88	64.706	ENSPCOG00000016733	MRPL4	91	64.706	Propithecus_coquereli
ENSSDUG00000002078	mrpl4	82	51.807	ENSPVAG00000003681	MRPL4	80	51.807	Pteropus_vampyrus
ENSSDUG00000002078	mrpl4	100	89.073	ENSPNYG00000023505	mrpl4	100	89.073	Pundamilia_nyererei
ENSSDUG00000002078	mrpl4	100	74.172	ENSPNAG00000011785	mrpl4	89	74.172	Pygocentrus_nattereri
ENSSDUG00000002078	mrpl4	89	66.790	ENSRNOG00000020659	Mrpl4	92	66.790	Rattus_norvegicus
ENSSDUG00000002078	mrpl4	67	72.772	ENSRBIG00000032283	-	93	72.772	Rhinopithecus_bieti
ENSSDUG00000002078	mrpl4	82	70.281	ENSRROG00000003982	MRPL4	85	70.281	Rhinopithecus_roxellana
ENSSDUG00000002078	mrpl4	82	69.076	ENSSBOG00000020666	MRPL4	85	69.076	Saimiri_boliviensis_boliviensis
ENSSDUG00000002078	mrpl4	96	66.436	ENSSHAG00000008539	MRPL4	94	66.436	Sarcophilus_harrisii
ENSSDUG00000002078	mrpl4	100	70.861	ENSSFOG00015003308	mrpl4	99	70.861	Scleropages_formosus
ENSSDUG00000002078	mrpl4	93	83.214	ENSSMAG00000021118	mrpl4	97	81.849	Scophthalmus_maximus
ENSSDUG00000002078	mrpl4	100	99.338	ENSSLDG00000015083	mrpl4	100	99.338	Seriola_lalandi_dorsalis
ENSSDUG00000002078	mrpl4	100	91.060	ENSSPAG00000010120	mrpl4	100	91.060	Stegastes_partitus
ENSSDUG00000002078	mrpl4	82	71.084	ENSSSCG00000013656	MRPL4	90	71.084	Sus_scrofa
ENSSDUG00000002078	mrpl4	100	84.437	ENSTRUG00000008532	mrpl4	100	84.437	Takifugu_rubripes
ENSSDUG00000002078	mrpl4	100	77.228	ENSTNIG00000003265	mrpl4	100	77.228	Tetraodon_nigroviridis
ENSSDUG00000002078	mrpl4	73	64.000	ENSTBEG00000006336	MRPL4	91	64.000	Tupaia_belangeri
ENSSDUG00000002078	mrpl4	89	65.314	ENSTTRG00000009532	MRPL4	87	65.314	Tursiops_truncatus
ENSSDUG00000002078	mrpl4	68	66.341	ENSUAMG00000020392	MRPL4	67	66.341	Ursus_americanus
ENSSDUG00000002078	mrpl4	82	68.675	ENSUMAG00000025105	MRPL4	85	68.675	Ursus_maritimus
ENSSDUG00000002078	mrpl4	66	56.500	ENSVPAG00000006123	MRPL4	66	56.716	Vicugna_pacos
ENSSDUG00000002078	mrpl4	82	70.683	ENSVVUG00000028961	MRPL4	85	70.683	Vulpes_vulpes
ENSSDUG00000002078	mrpl4	94	67.018	ENSXETG00000022060	mrpl4	97	66.096	Xenopus_tropicalis
ENSSDUG00000002078	mrpl4	100	83.224	ENSXCOG00000011438	mrpl4	100	83.224	Xiphophorus_couchianus
ENSSDUG00000002078	mrpl4	100	85.762	ENSXMAG00000030102	mrpl4	100	85.762	Xiphophorus_maculatus