EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002089 (Gene tree)
Gene ID: 111237714
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 16426 bases
Position: chrBDQW01001090.1:257104-273529
Accession: 111237714
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002702	Ribosomal_L7Ae	PF01248.26	7e-21	1	1
ENSSDUP00000002729	Ribosomal_L7Ae	PF01248.26	7.5e-21	1	1
ENSSDUP00000002683	Ribosomal_L7Ae	PF01248.26	7.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002802	-	4916	XM_022766916	ENSSDUP00000002729	800 (aa)	XP_022622637	UPI000BBE86AA
ENSSDUT00000002775	-	2882	-	ENSSDUP00000002702	761 (aa)	-	-
ENSSDUT00000002756	-	3057	-	ENSSDUP00000002683	794 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002089	secisbp2	54	42.955	ENSG00000138593	SECISBP2L	58	46.774	Homo_sapiens
ENSSDUG00000002089	secisbp2	83	40.177	ENSG00000187742	SECISBP2	82	40.831	Homo_sapiens
ENSSDUG00000002089	secisbp2	99	75.094	ENSAPOG00000005939	secisbp2	98	75.094	Acanthochromis_polyacanthus
ENSSDUG00000002089	secisbp2	83	34.454	ENSAMEG00000001504	SECISBP2L	58	36.349	Ailuropoda_melanoleuca
ENSSDUG00000002089	secisbp2	68	47.328	ENSAMEG00000003349	SECISBP2	53	50.505	Ailuropoda_melanoleuca
ENSSDUG00000002089	secisbp2	60	69.271	ENSACIG00000024185	secisbp2	87	69.271	Amphilophus_citrinellus
ENSSDUG00000002089	secisbp2	99	74.125	ENSAOCG00000019052	secisbp2	98	74.125	Amphiprion_ocellaris
ENSSDUG00000002089	secisbp2	99	74.375	ENSAPEG00000012971	secisbp2	98	74.375	Amphiprion_percula
ENSSDUG00000002089	secisbp2	99	76.095	ENSATEG00000001095	secisbp2	99	76.095	Anabas_testudineus
ENSSDUG00000002089	secisbp2	73	44.655	ENSAPLG00000013053	SECISBP2	62	45.254	Anas_platyrhynchos
ENSSDUG00000002089	secisbp2	76	44.811	ENSACAG00000016594	SECISBP2	72	46.093	Anolis_carolinensis
ENSSDUG00000002089	secisbp2	83	41.168	ENSANAG00000028208	SECISBP2	75	41.364	Aotus_nancymaae
ENSSDUG00000002089	secisbp2	100	70.588	ENSACLG00000019976	secisbp2	99	70.426	Astatotilapia_calliptera
ENSSDUG00000002089	secisbp2	85	52.762	ENSAMXG00000015953	secisbp2	97	50.064	Astyanax_mexicanus
ENSSDUG00000002089	secisbp2	62	51.059	ENSBTAG00000001939	SECISBP2	67	49.395	Bos_taurus
ENSSDUG00000002089	secisbp2	83	41.541	ENSCJAG00000007806	SECISBP2	75	42.167	Callithrix_jacchus
ENSSDUG00000002089	secisbp2	62	50.526	ENSCAFG00000002188	SECISBP2	53	49.899	Canis_familiaris
ENSSDUG00000002089	secisbp2	83	34.492	ENSCAFG00000014822	SECISBP2L	65	34.771	Canis_familiaris
ENSSDUG00000002089	secisbp2	62	50.526	ENSCAFG00020007224	SECISBP2	53	49.899	Canis_lupus_dingo
ENSSDUG00000002089	secisbp2	62	51.163	ENSCHIG00000010657	SECISBP2	52	50.710	Capra_hircus
ENSSDUG00000002089	secisbp2	61	46.985	ENSTSYG00000014119	SECISBP2	56	47.211	Carlito_syrichta
ENSSDUG00000002089	secisbp2	54	43.052	ENSTSYG00000004333	SECISBP2L	58	36.006	Carlito_syrichta
ENSSDUG00000002089	secisbp2	81	41.369	ENSCPOG00000014270	SECISBP2	74	41.618	Cavia_porcellus
ENSSDUG00000002089	secisbp2	83	42.066	ENSCCAG00000013350	SECISBP2	75	41.945	Cebus_capucinus
ENSSDUG00000002089	secisbp2	83	40.330	ENSCATG00000008304	SECISBP2	75	41.364	Cercocebus_atys
ENSSDUG00000002089	secisbp2	53	53.620	ENSCPBG00000005608	SECISBP2	85	54.338	Chrysemys_picta_bellii
ENSSDUG00000002089	secisbp2	83	40.361	ENSCANG00000034551	SECISBP2	57	48.988	Colobus_angolensis_palliatus
ENSSDUG00000002089	secisbp2	51	44.019	ENSCANG00000029294	SECISBP2L	58	35.881	Colobus_angolensis_palliatus
ENSSDUG00000002089	secisbp2	62	47.799	ENSCGRG00001013930	Secisbp2	53	47.485	Cricetulus_griseus_chok1gshd
ENSSDUG00000002089	secisbp2	62	47.799	ENSCGRG00000002600	Secisbp2	53	47.485	Cricetulus_griseus_crigri
ENSSDUG00000002089	secisbp2	99	58.630	ENSCVAG00000015876	secisbp2	98	57.862	Cyprinodon_variegatus
ENSSDUG00000002089	secisbp2	72	57.366	ENSDARG00000073892	secisbp2	98	57.366	Danio_rerio
ENSSDUG00000002089	secisbp2	62	51.042	ENSDNOG00000009432	SECISBP2	52	50.902	Dasypus_novemcinctus
ENSSDUG00000002089	secisbp2	81	41.617	ENSDORG00000023182	Secisbp2	76	41.135	Dipodomys_ordii
ENSSDUG00000002089	secisbp2	62	50.625	ENSEASG00005013960	SECISBP2	53	50.400	Equus_asinus_asinus
ENSSDUG00000002089	secisbp2	62	50.625	ENSECAG00000015868	SECISBP2	53	50.400	Equus_caballus
ENSSDUG00000002089	secisbp2	55	61.111	ENSELUG00000014795	-	93	61.111	Esox_lucius
ENSSDUG00000002089	secisbp2	83	34.415	ENSFCAG00000022355	SECISBP2L	64	34.697	Felis_catus
ENSSDUG00000002089	secisbp2	61	48.374	ENSFCAG00000004214	SECISBP2	57	47.800	Felis_catus
ENSSDUG00000002089	secisbp2	73	46.712	ENSFALG00000012441	SECISBP2	66	48.344	Ficedula_albicollis
ENSSDUG00000002089	secisbp2	81	42.296	ENSFDAG00000021183	SECISBP2	71	43.129	Fukomys_damarensis
ENSSDUG00000002089	secisbp2	99	63.373	ENSFHEG00000004095	secisbp2	98	62.767	Fundulus_heteroclitus
ENSSDUG00000002089	secisbp2	71	48.858	ENSGALG00000010694	SECISBP2	62	48.581	Gallus_gallus
ENSSDUG00000002089	secisbp2	99	63.444	ENSGAFG00000016947	secisbp2	97	62.832	Gambusia_affinis
ENSSDUG00000002089	secisbp2	80	70.370	ENSGACG00000013757	secisbp2	100	70.525	Gasterosteus_aculeatus
ENSSDUG00000002089	secisbp2	83	40.177	ENSGGOG00000000453	SECISBP2	81	40.831	Gorilla_gorilla
ENSSDUG00000002089	secisbp2	52	77.804	ENSHBUG00000007014	secisbp2	99	77.804	Haplochromis_burtoni
ENSSDUG00000002089	secisbp2	81	40.957	ENSHGLG00000014380	SECISBP2	71	41.534	Heterocephalus_glaber_female
ENSSDUG00000002089	secisbp2	81	40.957	ENSHGLG00100006953	SECISBP2	71	41.534	Heterocephalus_glaber_male
ENSSDUG00000002089	secisbp2	85	52.861	ENSHCOG00000008010	secisbp2	85	52.861	Hippocampus_comes
ENSSDUG00000002089	secisbp2	92	51.044	ENSIPUG00000015393	secisbp2	94	50.517	Ictalurus_punctatus
ENSSDUG00000002089	secisbp2	83	41.902	ENSSTOG00000000921	SECISBP2	51	50.515	Ictidomys_tridecemlineatus
ENSSDUG00000002089	secisbp2	79	35.538	ENSSTOG00000005317	SECISBP2L	64	34.746	Ictidomys_tridecemlineatus
ENSSDUG00000002089	secisbp2	63	48.676	ENSJJAG00000020492	Secisbp2	54	48.141	Jaculus_jaculus
ENSSDUG00000002089	secisbp2	98	58.704	ENSKMAG00000007129	secisbp2	97	58.801	Kryptolebias_marmoratus
ENSSDUG00000002089	secisbp2	100	69.241	ENSLBEG00000026023	secisbp2	100	69.118	Labrus_bergylta
ENSSDUG00000002089	secisbp2	62	49.004	ENSLACG00000005735	SECISBP2	90	49.711	Latimeria_chalumnae
ENSSDUG00000002089	secisbp2	72	59.177	ENSLOCG00000011742	secisbp2	96	59.075	Lepisosteus_oculatus
ENSSDUG00000002089	secisbp2	62	50.312	ENSLAFG00000012998	SECISBP2	53	50.397	Loxodonta_africana
ENSSDUG00000002089	secisbp2	83	40.390	ENSMFAG00000003045	SECISBP2	82	41.048	Macaca_fascicularis
ENSSDUG00000002089	secisbp2	83	40.541	ENSMMUG00000012532	SECISBP2	82	41.194	Macaca_mulatta
ENSSDUG00000002089	secisbp2	83	40.240	ENSMNEG00000031737	SECISBP2	81	40.902	Macaca_nemestrina
ENSSDUG00000002089	secisbp2	83	40.390	ENSMLEG00000028868	SECISBP2	81	41.134	Mandrillus_leucophaeus
ENSSDUG00000002089	secisbp2	99	75.346	ENSMAMG00000006644	secisbp2	98	75.346	Mastacembelus_armatus
ENSSDUG00000002089	secisbp2	100	70.588	ENSMZEG00005013614	secisbp2	99	70.426	Maylandia_zebra
ENSSDUG00000002089	secisbp2	61	48.950	ENSMAUG00000008659	Secisbp2	54	48.884	Mesocricetus_auratus
ENSSDUG00000002089	secisbp2	81	42.598	ENSMICG00000001176	SECISBP2	57	49.600	Microcebus_murinus
ENSSDUG00000002089	secisbp2	62	48.218	ENSMOCG00000000616	Secisbp2	53	47.887	Microtus_ochrogaster
ENSSDUG00000002089	secisbp2	51	78.497	ENSMMOG00000017977	secisbp2	98	69.298	Mola_mola
ENSSDUG00000002089	secisbp2	81	43.333	ENSMODG00000013365	SECISBP2	75	43.639	Monodelphis_domestica
ENSSDUG00000002089	secisbp2	98	73.282	ENSMALG00000004907	secisbp2	99	73.563	Monopterus_albus
ENSSDUG00000002089	secisbp2	53	43.409	MGP_CAROLIEiJ_G0024231	Secisbp2l	78	48.529	Mus_caroli
ENSSDUG00000002089	secisbp2	62	48.542	MGP_CAROLIEiJ_G0018518	Secisbp2	53	48.000	Mus_caroli
ENSSDUG00000002089	secisbp2	51	44.550	ENSMUSG00000035093	Secisbp2l	77	48.529	Mus_musculus
ENSSDUG00000002089	secisbp2	62	48.649	ENSMUSG00000035139	Secisbp2	53	48.703	Mus_musculus
ENSSDUG00000002089	secisbp2	51	44.313	MGP_PahariEiJ_G0025677	Secisbp2l	78	48.235	Mus_pahari
ENSSDUG00000002089	secisbp2	62	48.434	MGP_PahariEiJ_G0019584	Secisbp2	53	47.695	Mus_pahari
ENSSDUG00000002089	secisbp2	62	48.560	MGP_SPRETEiJ_G0019399	Secisbp2	53	48.221	Mus_spretus
ENSSDUG00000002089	secisbp2	51	44.787	MGP_SPRETEiJ_G0025151	Secisbp2l	78	48.529	Mus_spretus
ENSSDUG00000002089	secisbp2	61	49.574	ENSMPUG00000008495	-	84	48.024	Mustela_putorius_furo
ENSSDUG00000002089	secisbp2	79	35.725	ENSMPUG00000012321	SECISBP2L	64	34.697	Mustela_putorius_furo
ENSSDUG00000002089	secisbp2	61	51.374	ENSMLUG00000012348	SECISBP2	51	51.116	Myotis_lucifugus
ENSSDUG00000002089	secisbp2	62	48.125	ENSNGAG00000002364	Secisbp2	53	47.705	Nannospalax_galili
ENSSDUG00000002089	secisbp2	100	70.235	ENSNBRG00000022804	secisbp2	99	70.088	Neolamprologus_brichardi
ENSSDUG00000002089	secisbp2	83	40.177	ENSNLEG00000008739	SECISBP2	81	40.831	Nomascus_leucogenys
ENSSDUG00000002089	secisbp2	81	42.154	ENSODEG00000000675	SECISBP2	73	42.985	Octodon_degus
ENSSDUG00000002089	secisbp2	69	68.240	ENSONIG00000016931	secisbp2	100	76.675	Oreochromis_niloticus
ENSSDUG00000002089	secisbp2	93	58.496	ENSORLG00000000343	secisbp2	97	60.921	Oryzias_latipes
ENSSDUG00000002089	secisbp2	93	58.159	ENSORLG00020012878	secisbp2	98	59.659	Oryzias_latipes_hni
ENSSDUG00000002089	secisbp2	93	58.078	ENSORLG00015004559	secisbp2	95	58.035	Oryzias_latipes_hsok
ENSSDUG00000002089	secisbp2	92	57.857	ENSOMEG00000008595	secisbp2	93	57.739	Oryzias_melastigma
ENSSDUG00000002089	secisbp2	81	43.359	ENSOGAG00000000317	SECISBP2	52	50.100	Otolemur_garnettii
ENSSDUG00000002089	secisbp2	62	50.740	ENSOARG00000007741	SECISBP2	52	50.304	Ovis_aries
ENSSDUG00000002089	secisbp2	83	40.177	ENSPPAG00000012385	SECISBP2	81	40.831	Pan_paniscus
ENSSDUG00000002089	secisbp2	61	47.454	ENSPPRG00000023911	SECISBP2	52	47.658	Panthera_pardus
ENSSDUG00000002089	secisbp2	83	40.325	ENSPTRG00000021094	SECISBP2	82	40.974	Pan_troglodytes
ENSSDUG00000002089	secisbp2	83	40.780	ENSPANG00000024873	SECISBP2	51	54.369	Papio_anubis
ENSSDUG00000002089	secisbp2	98	48.380	ENSPKIG00000006499	SECISBP2	97	48.380	Paramormyrops_kingsleyae
ENSSDUG00000002089	secisbp2	63	50.669	ENSPSIG00000016257	SECISBP2	84	45.714	Pelodiscus_sinensis
ENSSDUG00000002089	secisbp2	62	48.852	ENSPEMG00000020212	Secisbp2	52	48.497	Peromyscus_maniculatus_bairdii
ENSSDUG00000002089	secisbp2	66	40.000	ENSPCIG00000018047	SECISBP2L	52	38.737	Phascolarctos_cinereus
ENSSDUG00000002089	secisbp2	81	43.223	ENSPCIG00000010304	SECISBP2	75	43.695	Phascolarctos_cinereus
ENSSDUG00000002089	secisbp2	100	62.565	ENSPFOG00000008146	secisbp2	99	62.125	Poecilia_formosa
ENSSDUG00000002089	secisbp2	55	72.769	ENSPLAG00000004505	secisbp2	99	72.769	Poecilia_latipinna
ENSSDUG00000002089	secisbp2	100	62.696	ENSPMEG00000013702	secisbp2	99	62.250	Poecilia_mexicana
ENSSDUG00000002089	secisbp2	100	62.614	ENSPREG00000008117	secisbp2	99	62.047	Poecilia_reticulata
ENSSDUG00000002089	secisbp2	83	40.325	ENSPPYG00000019359	SECISBP2	75	41.261	Pongo_abelii
ENSSDUG00000002089	secisbp2	61	46.444	ENSPCAG00000000559	-	52	46.444	Procavia_capensis
ENSSDUG00000002089	secisbp2	81	43.158	ENSPCOG00000013354	SECISBP2	73	41.813	Propithecus_coquereli
ENSSDUG00000002089	secisbp2	100	70.458	ENSPNYG00000016799	secisbp2	99	70.301	Pundamilia_nyererei
ENSSDUG00000002089	secisbp2	71	56.752	ENSPNAG00000029922	secisbp2	76	56.388	Pygocentrus_nattereri
ENSSDUG00000002089	secisbp2	61	48.312	ENSRNOG00000013773	Secisbp2	53	47.976	Rattus_norvegicus
ENSSDUG00000002089	secisbp2	83	40.390	ENSRBIG00000044115	SECISBP2	52	48.988	Rhinopithecus_bieti
ENSSDUG00000002089	secisbp2	83	40.390	ENSRROG00000030742	SECISBP2	53	54.369	Rhinopithecus_roxellana
ENSSDUG00000002089	secisbp2	62	49.683	ENSSBOG00000015392	SECISBP2	56	55.340	Saimiri_boliviensis_boliviensis
ENSSDUG00000002089	secisbp2	51	46.318	ENSSHAG00000016105	SECISBP2L	52	39.415	Sarcophilus_harrisii
ENSSDUG00000002089	secisbp2	81	42.199	ENSSHAG00000005947	SECISBP2	55	49.904	Sarcophilus_harrisii
ENSSDUG00000002089	secisbp2	92	49.872	ENSSFOG00015010409	secisbp2	90	49.872	Scleropages_formosus
ENSSDUG00000002089	secisbp2	100	77.682	ENSSMAG00000008472	secisbp2	100	82.078	Scophthalmus_maximus
ENSSDUG00000002089	secisbp2	100	98.125	ENSSLDG00000003510	secisbp2	100	98.125	Seriola_lalandi_dorsalis
ENSSDUG00000002089	secisbp2	87	42.582	ENSSPUG00000009635	SECISBP2	92	42.292	Sphenodon_punctatus
ENSSDUG00000002089	secisbp2	99	74.875	ENSSPAG00000013606	secisbp2	98	75.000	Stegastes_partitus
ENSSDUG00000002089	secisbp2	54	43.409	ENSSSCG00000004653	SECISBP2L	58	36.037	Sus_scrofa
ENSSDUG00000002089	secisbp2	62	50.000	ENSSSCG00000028033	SECISBP2	52	49.296	Sus_scrofa
ENSSDUG00000002089	secisbp2	71	45.259	ENSTGUG00000000440	SECISBP2	97	45.581	Taeniopygia_guttata
ENSSDUG00000002089	secisbp2	88	65.230	ENSTRUG00000016835	secisbp2	95	63.791	Takifugu_rubripes
ENSSDUG00000002089	secisbp2	66	39.292	ENSTNIG00000009531	SECISBP2L	50	40.351	Tetraodon_nigroviridis
ENSSDUG00000002089	secisbp2	65	67.181	ENSTNIG00000015576	secisbp2	99	67.976	Tetraodon_nigroviridis
ENSSDUG00000002089	secisbp2	61	49.087	ENSTTRG00000003339	SECISBP2	52	49.290	Tursiops_truncatus
ENSSDUG00000002089	secisbp2	62	50.210	ENSUAMG00000016243	SECISBP2	52	54.940	Ursus_americanus
ENSSDUG00000002089	secisbp2	79	35.981	ENSUMAG00000014412	SECISBP2L	62	35.286	Ursus_maritimus
ENSSDUG00000002089	secisbp2	62	49.790	ENSUMAG00000016261	SECISBP2	52	53.494	Ursus_maritimus
ENSSDUG00000002089	secisbp2	83	35.515	ENSVPAG00000008350	SECISBP2L	64	35.515	Vicugna_pacos
ENSSDUG00000002089	secisbp2	62	50.526	ENSVVUG00000022278	SECISBP2	56	49.899	Vulpes_vulpes
ENSSDUG00000002089	secisbp2	71	45.372	ENSXETG00000029955	SECISBP2	98	45.061	Xenopus_tropicalis
ENSSDUG00000002089	secisbp2	62	66.169	ENSXCOG00000009547	secisbp2	88	66.418	Xiphophorus_couchianus
ENSSDUG00000002089	secisbp2	99	63.408	ENSXMAG00000003090	secisbp2	97	63.052	Xiphophorus_maculatus