EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002130 (Gene tree)
Gene ID: 111232379
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2060 bases
Position: chrBDQW01000331.1:5172080-5174139
Accession: 111232379
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002798	Gar1	PF04410.14	8.2e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002871	-	723	XM_022759872	ENSSDUP00000002798	240 (aa)	XP_022615593	-

Gene Model

Click here to download ENSSDUG00000002130's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002130's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002130	gar1	89	92.661	ENSAOCG00000020947	gar1	99	92.661	Amphiprion_ocellaris
ENSSDUG00000002130	gar1	89	92.661	ENSAPEG00000001676	gar1	99	92.661	Amphiprion_percula
ENSSDUG00000002130	gar1	56	82.836	ENSDNOG00000037632	GAR1	54	92.523	Dasypus_novemcinctus
ENSSDUG00000002130	gar1	65	85.600	ENSLACG00000003306	GAR1	75	85.600	Latimeria_chalumnae
ENSSDUG00000002130	gar1	74	77.966	ENSMMOG00000004156	gar1	53	95.370	Mola_mola
ENSSDUG00000002130	gar1	60	76.147	ENSPTRG00000049340	-	51	75.701	Pan_troglodytes
ENSSDUG00000002130	gar1	66	77.358	ENSPSIG00000002970	GAR1	67	78.082	Pelodiscus_sinensis
ENSSDUG00000002130	gar1	54	86.047	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSSDUG00000002130	gar1	64	80.519	ENSVVUG00000017612	GAR1	55	93.458	Vulpes_vulpes