EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002237 (Gene tree)
Gene ID: 111224082
Gene Symbol: zgc:114130
Alias: fb92b09|wu:fb92b09
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 5335 bases
Position: chrBDQW01000122.1:2477171-2482505
Accession: 111224082
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002879	zf-CCCH	PF00642.24	5.8e-20	1	2
ENSSDUP00000002879	zf-CCCH	PF00642.24	5.8e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002952	-	3890	XM_022748468	ENSSDUP00000002879	430 (aa)	XP_022604189	UPI000BBEC10B

Gene Model

Click here to download ENSSDUG00000002237's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu04218	Cellular senescence	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002237's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002237	zgc:114130	66	36.713	ENSSDUG00000002247	zgc:162730	98	33.180

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002237	zgc:114130	100	79.814	ENSAPOG00000014912	zgc:114130	98	81.206	Acanthochromis_polyacanthus
ENSSDUG00000002237	zgc:114130	70	37.209	ENSAMEG00000014353	ZFP36L1	67	36.545	Ailuropoda_melanoleuca
ENSSDUG00000002237	zgc:114130	82	75.284	ENSACIG00000017364	zgc:114130	96	77.273	Amphilophus_citrinellus
ENSSDUG00000002237	zgc:114130	62	39.041	ENSACIG00000009027	sb:cb81	71	38.872	Amphilophus_citrinellus
ENSSDUG00000002237	zgc:114130	100	78.190	ENSAOCG00000022227	zgc:114130	98	79.814	Amphiprion_ocellaris
ENSSDUG00000002237	zgc:114130	64	37.282	ENSAOCG00000002001	zgc:162730	78	35.890	Amphiprion_ocellaris
ENSSDUG00000002237	zgc:114130	100	78.190	ENSAPEG00000015497	zgc:114130	98	79.814	Amphiprion_percula
ENSSDUG00000002237	zgc:114130	100	79.176	ENSATEG00000008781	zgc:114130	98	80.549	Anabas_testudineus
ENSSDUG00000002237	zgc:114130	62	37.671	ENSATEG00000003462	sb:cb81	71	37.237	Anabas_testudineus
ENSSDUG00000002237	zgc:114130	62	38.356	ENSACLG00000013759	sb:cb81	71	38.438	Astatotilapia_calliptera
ENSSDUG00000002237	zgc:114130	100	70.998	ENSACLG00000022113	zgc:114130	98	72.979	Astatotilapia_calliptera
ENSSDUG00000002237	zgc:114130	100	45.536	ENSAMXG00000038581	zgc:114130	95	46.491	Astyanax_mexicanus
ENSSDUG00000002237	zgc:114130	72	37.736	ENSAMXG00000034874	sb:cb81	76	36.418	Astyanax_mexicanus
ENSSDUG00000002237	zgc:114130	70	36.877	ENSCAFG00000016497	ZFP36L1	67	36.213	Canis_familiaris
ENSSDUG00000002237	zgc:114130	70	36.877	ENSCAFG00020005951	ZFP36L1	67	36.213	Canis_lupus_dingo
ENSSDUG00000002237	zgc:114130	70	37.209	ENSCGRG00001010926	Zfp36l1	67	36.545	Cricetulus_griseus_chok1gshd
ENSSDUG00000002237	zgc:114130	70	36.877	ENSCGRG00000007735	Zfp36l1	67	36.213	Cricetulus_griseus_crigri
ENSSDUG00000002237	zgc:114130	100	70.642	ENSCSEG00000018290	zgc:114130	98	71.330	Cynoglossus_semilaevis
ENSSDUG00000002237	zgc:114130	60	36.749	ENSCSEG00000018283	zgc:162730	66	35.393	Cynoglossus_semilaevis
ENSSDUG00000002237	zgc:114130	100	64.220	ENSCVAG00000018574	zgc:114130	100	63.991	Cyprinodon_variegatus
ENSSDUG00000002237	zgc:114130	60	41.288	ENSCVAG00000018571	zgc:162730	60	39.925	Cyprinodon_variegatus
ENSSDUG00000002237	zgc:114130	62	40.767	ENSCVAG00000009207	sb:cb81	71	39.157	Cyprinodon_variegatus
ENSSDUG00000002237	zgc:114130	100	46.101	ENSDARG00000040725	zgc:114130	96	46.453	Danio_rerio
ENSSDUG00000002237	zgc:114130	50	47.345	ENSDARG00000040503	sb:cb81	76	39.024	Danio_rerio
ENSSDUG00000002237	zgc:114130	97	32.102	ENSELUG00000013158	zgc:162730	67	39.493	Esox_lucius
ENSSDUG00000002237	zgc:114130	69	41.806	ENSELUG00000021506	zfp36l1a	60	46.182	Esox_lucius
ENSSDUG00000002237	zgc:114130	100	50.339	ENSELUG00000013151	zgc:114130	97	50.113	Esox_lucius
ENSSDUG00000002237	zgc:114130	98	35.535	ENSELUG00000013045	sb:cb81	98	35.763	Esox_lucius
ENSSDUG00000002237	zgc:114130	77	36.695	ENSFHEG00000013710	zgc:162730	80	35.580	Fundulus_heteroclitus
ENSSDUG00000002237	zgc:114130	100	62.955	ENSFHEG00000000656	zgc:114130	100	65.909	Fundulus_heteroclitus
ENSSDUG00000002237	zgc:114130	64	39.456	ENSFHEG00000022187	sb:cb81	72	39.339	Fundulus_heteroclitus
ENSSDUG00000002237	zgc:114130	64	36.559	ENSGMOG00000017242	zgc:162730	78	38.732	Gadus_morhua
ENSSDUG00000002237	zgc:114130	78	59.882	ENSGMOG00000017223	zgc:114130	99	60.294	Gadus_morhua
ENSSDUG00000002237	zgc:114130	80	69.914	ENSGAFG00000009949	zgc:114130	92	69.341	Gambusia_affinis
ENSSDUG00000002237	zgc:114130	60	38.550	ENSGAFG00000009953	zgc:162730	72	34.783	Gambusia_affinis
ENSSDUG00000002237	zgc:114130	62	36.429	ENSGAFG00000015700	sb:cb81	69	35.556	Gambusia_affinis
ENSSDUG00000002237	zgc:114130	79	78.107	ENSGACG00000008344	zgc:114130	99	77.515	Gasterosteus_aculeatus
ENSSDUG00000002237	zgc:114130	100	71.694	ENSHBUG00000015051	zgc:114130	98	73.441	Haplochromis_burtoni
ENSSDUG00000002237	zgc:114130	62	39.236	ENSHBUG00000002383	sb:cb81	72	38.739	Haplochromis_burtoni
ENSSDUG00000002237	zgc:114130	100	63.805	ENSHCOG00000015800	zgc:114130	96	63.573	Hippocampus_comes
ENSSDUG00000002237	zgc:114130	63	59.375	ENSHCOG00000012747	zfp36l1b	51	45.968	Hippocampus_comes
ENSSDUG00000002237	zgc:114130	64	39.785	ENSIPUG00000011378	sb:cb81	73	38.127	Ictalurus_punctatus
ENSSDUG00000002237	zgc:114130	100	43.256	ENSIPUG00000018256	zgc:114130	79	44.884	Ictalurus_punctatus
ENSSDUG00000002237	zgc:114130	50	43.182	ENSKMAG00000019277	zgc:162730	70	38.820	Kryptolebias_marmoratus
ENSSDUG00000002237	zgc:114130	100	69.406	ENSKMAG00000019287	zgc:114130	98	69.635	Kryptolebias_marmoratus
ENSSDUG00000002237	zgc:114130	100	74.306	ENSLBEG00000018387	zgc:114130	98	74.306	Labrus_bergylta
ENSSDUG00000002237	zgc:114130	98	36.508	ENSLACG00000015732	sb:cb81	98	35.541	Latimeria_chalumnae
ENSSDUG00000002237	zgc:114130	64	40.502	ENSLACG00000015967	ZFP36L1	65	40.217	Latimeria_chalumnae
ENSSDUG00000002237	zgc:114130	98	38.149	ENSLOCG00000014587	sb:cb81	98	38.584	Lepisosteus_oculatus
ENSSDUG00000002237	zgc:114130	72	37.771	ENSLOCG00000014597	zgc:162730	71	36.223	Lepisosteus_oculatus
ENSSDUG00000002237	zgc:114130	100	78.886	ENSMAMG00000007511	zgc:114130	96	78.886	Mastacembelus_armatus
ENSSDUG00000002237	zgc:114130	64	35.691	ENSMAMG00000007516	zgc:162730	64	35.390	Mastacembelus_armatus
ENSSDUG00000002237	zgc:114130	62	38.699	ENSMZEG00005016001	-	71	38.438	Maylandia_zebra
ENSSDUG00000002237	zgc:114130	62	38.567	ENSMZEG00005024684	sb:cb81	71	38.138	Maylandia_zebra
ENSSDUG00000002237	zgc:114130	100	71.230	ENSMZEG00005014410	zgc:114130	98	72.979	Maylandia_zebra
ENSSDUG00000002237	zgc:114130	70	37.209	ENSMAUG00000020087	Zfp36l1	67	36.545	Mesocricetus_auratus
ENSSDUG00000002237	zgc:114130	70	37.542	ENSMOCG00000003189	Zfp36l1	67	36.877	Microtus_ochrogaster
ENSSDUG00000002237	zgc:114130	58	32.669	ENSMMOG00000011506	zgc:162730	98	36.047	Mola_mola
ENSSDUG00000002237	zgc:114130	83	77.716	ENSMMOG00000011504	zgc:114130	96	77.994	Mola_mola
ENSSDUG00000002237	zgc:114130	64	38.047	ENSMALG00000002348	zgc:162730	65	37.013	Monopterus_albus
ENSSDUG00000002237	zgc:114130	70	37.209	MGP_CAROLIEiJ_G0017893	Zfp36l1	67	36.545	Mus_caroli
ENSSDUG00000002237	zgc:114130	70	37.209	ENSMUSG00000021127	Zfp36l1	67	36.545	Mus_musculus
ENSSDUG00000002237	zgc:114130	70	37.209	MGP_PahariEiJ_G0029649	Zfp36l1	67	36.545	Mus_pahari
ENSSDUG00000002237	zgc:114130	70	37.209	MGP_SPRETEiJ_G0018738	Zfp36l1	67	36.545	Mus_spretus
ENSSDUG00000002237	zgc:114130	70	37.209	ENSNGAG00000024367	Zfp36l1	67	36.545	Nannospalax_galili
ENSSDUG00000002237	zgc:114130	81	67.529	ENSNBRG00000013703	zgc:114130	97	68.103	Neolamprologus_brichardi
ENSSDUG00000002237	zgc:114130	50	43.172	ENSNBRG00000006231	sb:cb81	58	40.074	Neolamprologus_brichardi
ENSSDUG00000002237	zgc:114130	50	40.092	ENSONIG00000005003	zgc:162730	98	33.708	Oreochromis_niloticus
ENSSDUG00000002237	zgc:114130	79	72.141	ENSONIG00000005004	zgc:114130	99	72.141	Oreochromis_niloticus
ENSSDUG00000002237	zgc:114130	62	36.271	ENSONIG00000001259	sb:cb81	72	38.138	Oreochromis_niloticus
ENSSDUG00000002237	zgc:114130	63	37.762	ENSPFOG00000013806	sb:cb81	68	35.922	Poecilia_formosa
ENSSDUG00000002237	zgc:114130	60	38.346	ENSPFOG00000003665	zgc:162730	75	34.412	Poecilia_formosa
ENSSDUG00000002237	zgc:114130	100	66.444	ENSPFOG00000003653	zgc:114130	100	71.038	Poecilia_formosa
ENSSDUG00000002237	zgc:114130	51	41.410	ENSPLAG00000020158	sb:cb81	62	39.062	Poecilia_latipinna
ENSSDUG00000002237	zgc:114130	60	38.722	ENSPLAG00000000946	zgc:162730	75	34.706	Poecilia_latipinna
ENSSDUG00000002237	zgc:114130	100	66.741	ENSPLAG00000000947	zgc:114130	100	69.545	Poecilia_latipinna
ENSSDUG00000002237	zgc:114130	60	38.346	ENSPMEG00000000341	zgc:162730	72	34.862	Poecilia_mexicana
ENSSDUG00000002237	zgc:114130	100	65.854	ENSPMEG00000015335	zgc:114130	100	68.552	Poecilia_mexicana
ENSSDUG00000002237	zgc:114130	63	37.762	ENSPMEG00000022425	sb:cb81	68	35.922	Poecilia_mexicana
ENSSDUG00000002237	zgc:114130	60	37.970	ENSPREG00000021263	zgc:162730	72	34.356	Poecilia_reticulata
ENSSDUG00000002237	zgc:114130	100	69.773	ENSPREG00000021254	zgc:114130	100	69.545	Poecilia_reticulata
ENSSDUG00000002237	zgc:114130	100	72.158	ENSPNYG00000015546	zgc:114130	98	73.441	Pundamilia_nyererei
ENSSDUG00000002237	zgc:114130	62	39.643	ENSPNYG00000007502	sb:cb81	70	38.272	Pundamilia_nyererei
ENSSDUG00000002237	zgc:114130	98	37.701	ENSPNAG00000030063	sb:cb81	98	37.385	Pygocentrus_nattereri
ENSSDUG00000002237	zgc:114130	100	38.137	ENSPNAG00000023029	zgc:114130	96	42.793	Pygocentrus_nattereri
ENSSDUG00000002237	zgc:114130	64	38.043	ENSSFOG00015003179	sb:cb81	72	34.985	Scleropages_formosus
ENSSDUG00000002237	zgc:114130	100	80.324	ENSSMAG00000018621	zgc:114130	95	80.324	Scophthalmus_maximus
ENSSDUG00000002237	zgc:114130	100	98.605	ENSSLDG00000008496	zgc:114130	100	98.605	Seriola_lalandi_dorsalis
ENSSDUG00000002237	zgc:114130	66	36.713	ENSSLDG00000008502	zgc:162730	98	33.871	Seriola_lalandi_dorsalis
ENSSDUG00000002237	zgc:114130	60	38.202	ENSSPAG00000006851	zgc:162730	78	36.538	Stegastes_partitus
ENSSDUG00000002237	zgc:114130	100	77.958	ENSSPAG00000006856	zgc:114130	98	77.958	Stegastes_partitus
ENSSDUG00000002237	zgc:114130	100	69.374	ENSTRUG00000022473	zgc:114130	98	69.606	Takifugu_rubripes
ENSSDUG00000002237	zgc:114130	67	37.580	ENSTRUG00000021229	zgc:162730	64	37.793	Takifugu_rubripes
ENSSDUG00000002237	zgc:114130	64	39.362	ENSTRUG00000020720	sb:cb81	98	34.101	Takifugu_rubripes
ENSSDUG00000002237	zgc:114130	64	36.934	ENSTNIG00000000183	zgc:162730	93	32.678	Tetraodon_nigroviridis
ENSSDUG00000002237	zgc:114130	70	37.209	ENSUAMG00000010751	ZFP36L1	67	36.545	Ursus_americanus
ENSSDUG00000002237	zgc:114130	70	37.209	ENSUMAG00000010126	ZFP36L1	67	36.545	Ursus_maritimus
ENSSDUG00000002237	zgc:114130	70	36.877	ENSVVUG00000003551	ZFP36L1	67	36.213	Vulpes_vulpes
ENSSDUG00000002237	zgc:114130	85	59.189	ENSXCOG00000012792	zgc:114130	96	58.524	Xiphophorus_couchianus
ENSSDUG00000002237	zgc:114130	64	39.711	ENSXCOG00000001799	zfp36l1a	60	40.357	Xiphophorus_couchianus
ENSSDUG00000002237	zgc:114130	60	38.346	ENSXCOG00000012791	zgc:162730	73	34.663	Xiphophorus_couchianus
ENSSDUG00000002237	zgc:114130	60	38.346	ENSXMAG00000018206	zgc:162730	73	34.663	Xiphophorus_maculatus
ENSSDUG00000002237	zgc:114130	100	66.443	ENSXMAG00000026836	zgc:114130	100	68.037	Xiphophorus_maculatus
ENSSDUG00000002237	zgc:114130	62	36.429	ENSXMAG00000004681	sb:cb81	67	35.275	Xiphophorus_maculatus