EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002247 (Gene tree)
Gene ID: 111224108
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 3218 bases
Position: chrBDQW01000122.1:2502225-2505442
Accession: 111224108
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000002921	zf-CCCH	PF00642.24	2.9e-21	1	2
ENSSDUP00000002921	zf-CCCH	PF00642.24	2.9e-21	2	2
ENSSDUP00000002900	zf-CCCH	PF00642.24	3.8e-21	1	2
ENSSDUP00000002900	zf-CCCH	PF00642.24	3.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000002994	-	1164	-	ENSSDUP00000002921	387 (aa)	-	-
ENSSDUT00000002973	-	2635	XM_022748506	ENSSDUP00000002900	432 (aa)	XP_022604227	UPI000BBEF67B

Gene Model

Click here to download ENSSDUG00000002247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002247	zgc:162730	98	33.180	ENSSDUG00000002237	zgc:114130	66	36.713
ENSSDUG00000002247	zgc:162730	84	36.554	ENSSDUG00000004426	sb:cb81	97	36.199

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002247	zgc:162730	82	38.261	ENSAPOG00000011209	sb:cb81	86	39.766	Acanthochromis_polyacanthus
ENSSDUG00000002247	zgc:162730	100	84.491	ENSAPOG00000014920	zgc:162730	100	84.491	Acanthochromis_polyacanthus
ENSSDUG00000002247	zgc:162730	99	34.965	ENSACIG00000009027	sb:cb81	62	41.696	Amphilophus_citrinellus
ENSSDUG00000002247	zgc:162730	58	78.222	ENSACIG00000017366	zgc:162730	97	76.889	Amphilophus_citrinellus
ENSSDUG00000002247	zgc:162730	66	39.927	ENSACIG00000016314	zfp36l1a	68	39.630	Amphilophus_citrinellus
ENSSDUG00000002247	zgc:162730	100	84.028	ENSAOCG00000002001	zgc:162730	100	85.185	Amphiprion_ocellaris
ENSSDUG00000002247	zgc:162730	99	35.556	ENSAOCG00000024158	sb:cb81	64	44.074	Amphiprion_ocellaris
ENSSDUG00000002247	zgc:162730	94	85.012	ENSAPEG00000015490	zgc:162730	99	86.241	Amphiprion_percula
ENSSDUG00000002247	zgc:162730	99	35.062	ENSAPEG00000022405	sb:cb81	64	43.704	Amphiprion_percula
ENSSDUG00000002247	zgc:162730	99	34.954	ENSATEG00000003462	sb:cb81	97	34.216	Anabas_testudineus
ENSSDUG00000002247	zgc:162730	65	39.483	ENSATEG00000008781	zgc:114130	63	39.781	Anabas_testudineus
ENSSDUG00000002247	zgc:162730	100	80.415	ENSATEG00000008790	zgc:162730	100	82.028	Anabas_testudineus
ENSSDUG00000002247	zgc:162730	65	34.965	ENSACLG00000022113	zgc:114130	63	34.694	Astatotilapia_calliptera
ENSSDUG00000002247	zgc:162730	100	77.083	ENSACLG00000022112	zgc:162730	100	73.121	Astatotilapia_calliptera
ENSSDUG00000002247	zgc:162730	99	35.116	ENSACLG00000013759	sb:cb81	62	42.657	Astatotilapia_calliptera
ENSSDUG00000002247	zgc:162730	100	47.990	ENSAMXG00000035945	zgc:162730	99	46.750	Astyanax_mexicanus
ENSSDUG00000002247	zgc:162730	73	42.244	ENSAMXG00000034874	sb:cb81	97	36.085	Astyanax_mexicanus
ENSSDUG00000002247	zgc:162730	66	38.828	ENSCLAG00000003695	ZFP36L1	67	38.519	Chinchilla_lanigera
ENSSDUG00000002247	zgc:162730	66	41.544	ENSCPBG00000021516	ZFP36L1	68	40.433	Chrysemys_picta_bellii
ENSSDUG00000002247	zgc:162730	98	78.487	ENSCSEG00000018283	zgc:162730	95	80.180	Cynoglossus_semilaevis
ENSSDUG00000002247	zgc:162730	99	33.925	ENSCSEG00000014426	sb:cb81	83	35.147	Cynoglossus_semilaevis
ENSSDUG00000002247	zgc:162730	99	34.192	ENSCVAG00000009207	sb:cb81	63	43.463	Cyprinodon_variegatus
ENSSDUG00000002247	zgc:162730	100	71.759	ENSCVAG00000018571	zgc:162730	100	71.065	Cyprinodon_variegatus
ENSSDUG00000002247	zgc:162730	82	54.180	ENSDARG00000103720	zgc:162730	89	54.769	Danio_rerio
ENSSDUG00000002247	zgc:162730	99	37.717	ENSDARG00000040503	sb:cb81	97	37.129	Danio_rerio
ENSSDUG00000002247	zgc:162730	66	41.221	ENSDARG00000021443	zfp36l1b	62	39.544	Danio_rerio
ENSSDUG00000002247	zgc:162730	66	37.037	ENSELUG00000008675	zfp36l1b	61	37.643	Esox_lucius
ENSSDUG00000002247	zgc:162730	73	38.276	ENSELUG00000013151	zgc:114130	65	39.259	Esox_lucius
ENSSDUG00000002247	zgc:162730	100	56.030	ENSELUG00000013158	zgc:162730	100	54.613	Esox_lucius
ENSSDUG00000002247	zgc:162730	99	37.500	ENSELUG00000013045	sb:cb81	97	36.105	Esox_lucius
ENSSDUG00000002247	zgc:162730	99	34.651	ENSFHEG00000022187	sb:cb81	63	44.014	Fundulus_heteroclitus
ENSSDUG00000002247	zgc:162730	100	74.074	ENSFHEG00000013710	zgc:162730	100	73.380	Fundulus_heteroclitus
ENSSDUG00000002247	zgc:162730	80	67.919	ENSGMOG00000017242	zgc:162730	100	70.347	Gadus_morhua
ENSSDUG00000002247	zgc:162730	65	35.336	ENSGMOG00000017223	zgc:114130	81	36.429	Gadus_morhua
ENSSDUG00000002247	zgc:162730	67	38.346	ENSGMOG00000016803	sb:cb81	93	41.155	Gadus_morhua
ENSSDUG00000002247	zgc:162730	100	74.074	ENSGAFG00000009953	zgc:162730	100	73.380	Gambusia_affinis
ENSSDUG00000002247	zgc:162730	99	35.714	ENSGAFG00000015700	sb:cb81	78	39.763	Gambusia_affinis
ENSSDUG00000002247	zgc:162730	56	40.586	ENSGACG00000008344	zgc:114130	53	46.196	Gasterosteus_aculeatus
ENSSDUG00000002247	zgc:162730	69	40.569	ENSGACG00000011271	zfp36l1a	69	41.219	Gasterosteus_aculeatus
ENSSDUG00000002247	zgc:162730	77	77.603	ENSGACG00000008351	zgc:162730	100	77.287	Gasterosteus_aculeatus
ENSSDUG00000002247	zgc:162730	84	37.027	ENSGACG00000013400	sb:cb81	98	39.884	Gasterosteus_aculeatus
ENSSDUG00000002247	zgc:162730	66	41.697	ENSGAGG00000007315	ZFP36L1	68	40.217	Gopherus_agassizii
ENSSDUG00000002247	zgc:162730	100	77.315	ENSHBUG00000015057	zgc:162730	100	73.349	Haplochromis_burtoni
ENSSDUG00000002247	zgc:162730	99	35.104	ENSHBUG00000002383	sb:cb81	97	35.358	Haplochromis_burtoni
ENSSDUG00000002247	zgc:162730	99	32.151	ENSHCOG00000000792	sb:cb81	65	37.621	Hippocampus_comes
ENSSDUG00000002247	zgc:162730	57	33.333	ENSHCOG00000012747	zfp36l1b	91	31.250	Hippocampus_comes
ENSSDUG00000002247	zgc:162730	66	39.636	ENSHCOG00000013932	zfp36l1a	65	38.380	Hippocampus_comes
ENSSDUG00000002247	zgc:162730	100	74.483	ENSHCOG00000015801	zgc:162730	100	74.483	Hippocampus_comes
ENSSDUG00000002247	zgc:162730	63	40.377	ENSIPUG00000011378	sb:cb81	79	39.514	Ictalurus_punctatus
ENSSDUG00000002247	zgc:162730	100	48.878	ENSIPUG00000018248	zgc:162730	100	48.387	Ictalurus_punctatus
ENSSDUG00000002247	zgc:162730	66	37.736	ENSKMAG00000013156	zfp36l1a	62	39.245	Kryptolebias_marmoratus
ENSSDUG00000002247	zgc:162730	100	76.037	ENSKMAG00000019277	zgc:162730	100	75.576	Kryptolebias_marmoratus
ENSSDUG00000002247	zgc:162730	99	34.353	ENSKMAG00000009884	sb:cb81	97	37.819	Kryptolebias_marmoratus
ENSSDUG00000002247	zgc:162730	99	31.235	ENSLBEG00000018376	sb:cb81	97	33.953	Labrus_bergylta
ENSSDUG00000002247	zgc:162730	100	81.379	ENSLBEG00000018380	zgc:162730	100	81.609	Labrus_bergylta
ENSSDUG00000002247	zgc:162730	84	35.754	ENSLBEG00000018387	zgc:114130	65	39.502	Labrus_bergylta
ENSSDUG00000002247	zgc:162730	66	41.912	ENSLACG00000015967	ZFP36L1	66	40.433	Latimeria_chalumnae
ENSSDUG00000002247	zgc:162730	100	38.517	ENSLACG00000015980	-	85	42.165	Latimeria_chalumnae
ENSSDUG00000002247	zgc:162730	99	37.956	ENSLACG00000015732	sb:cb81	97	36.430	Latimeria_chalumnae
ENSSDUG00000002247	zgc:162730	99	40.964	ENSLOCG00000014587	sb:cb81	97	40.876	Lepisosteus_oculatus
ENSSDUG00000002247	zgc:162730	66	40.520	ENSLOCG00000013957	zfp36l1a	62	39.405	Lepisosteus_oculatus
ENSSDUG00000002247	zgc:162730	100	48.762	ENSLOCG00000014597	zgc:162730	72	56.055	Lepisosteus_oculatus
ENSSDUG00000002247	zgc:162730	100	81.944	ENSMAMG00000007516	zgc:162730	99	82.639	Mastacembelus_armatus
ENSSDUG00000002247	zgc:162730	66	39.855	ENSMAMG00000020144	sb:cb81	55	41.935	Mastacembelus_armatus
ENSSDUG00000002247	zgc:162730	99	34.332	ENSMZEG00005024684	sb:cb81	62	42.254	Maylandia_zebra
ENSSDUG00000002247	zgc:162730	100	74.680	ENSMZEG00005014415	zgc:162730	97	79.111	Maylandia_zebra
ENSSDUG00000002247	zgc:162730	65	34.965	ENSMZEG00005014410	zgc:114130	63	34.694	Maylandia_zebra
ENSSDUG00000002247	zgc:162730	99	34.813	ENSMZEG00005016001	-	62	42.254	Maylandia_zebra
ENSSDUG00000002247	zgc:162730	59	87.013	ENSMMOG00000011506	zgc:162730	99	86.580	Mola_mola
ENSSDUG00000002247	zgc:162730	77	36.810	ENSMMOG00000011504	zgc:114130	72	39.630	Mola_mola
ENSSDUG00000002247	zgc:162730	66	39.700	ENSMMOG00000010073	sb:cb81	74	40.893	Mola_mola
ENSSDUG00000002247	zgc:162730	100	78.522	ENSMALG00000002348	zgc:162730	100	79.908	Monopterus_albus
ENSSDUG00000002247	zgc:162730	66	66.667	ENSMALG00000021140	-	96	71.795	Monopterus_albus
ENSSDUG00000002247	zgc:162730	100	77.083	ENSNBRG00000013701	zgc:162730	100	73.121	Neolamprologus_brichardi
ENSSDUG00000002247	zgc:162730	99	35.556	ENSNBRG00000006231	sb:cb81	80	38.793	Neolamprologus_brichardi
ENSSDUG00000002247	zgc:162730	66	39.350	ENSMEUG00000003070	ZFP36L1	67	39.350	Notamacropus_eugenii
ENSSDUG00000002247	zgc:162730	99	35.214	ENSONIG00000001259	sb:cb81	97	35.698	Oreochromis_niloticus
ENSSDUG00000002247	zgc:162730	81	75.078	ENSONIG00000005003	zgc:162730	99	73.994	Oreochromis_niloticus
ENSSDUG00000002247	zgc:162730	99	37.101	ENSORLG00000024026	sb:cb81	56	43.116	Oryzias_latipes
ENSSDUG00000002247	zgc:162730	99	61.574	ENSORLG00000027149	zgc:162730	100	63.426	Oryzias_latipes
ENSSDUG00000002247	zgc:162730	99	61.806	ENSORLG00020020289	zgc:162730	100	63.657	Oryzias_latipes_hni
ENSSDUG00000002247	zgc:162730	99	37.811	ENSORLG00020021084	sb:cb81	66	42.809	Oryzias_latipes_hni
ENSSDUG00000002247	zgc:162730	99	62.356	ENSORLG00015001519	zgc:162730	100	63.972	Oryzias_latipes_hsok
ENSSDUG00000002247	zgc:162730	99	37.750	ENSORLG00015010105	sb:cb81	65	44.364	Oryzias_latipes_hsok
ENSSDUG00000002247	zgc:162730	99	35.891	ENSOMEG00000020565	sb:cb81	66	41.429	Oryzias_melastigma
ENSSDUG00000002247	zgc:162730	99	65.581	ENSOMEG00000017752	zgc:162730	100	66.512	Oryzias_melastigma
ENSSDUG00000002247	zgc:162730	66	42.322	ENSPMGG00000000442	zfp36l1a	68	42.164	Periophthalmus_magnuspinnatus
ENSSDUG00000002247	zgc:162730	66	39.350	ENSPCIG00000019895	ZFP36L1	59	39.350	Phascolarctos_cinereus
ENSSDUG00000002247	zgc:162730	99	35.627	ENSPFOG00000013806	sb:cb81	78	41.018	Poecilia_formosa
ENSSDUG00000002247	zgc:162730	100	74.306	ENSPFOG00000003665	zgc:162730	100	74.627	Poecilia_formosa
ENSSDUG00000002247	zgc:162730	81	38.462	ENSPLAG00000020158	sb:cb81	86	41.141	Poecilia_latipinna
ENSSDUG00000002247	zgc:162730	100	74.306	ENSPLAG00000000946	zgc:162730	100	73.611	Poecilia_latipinna
ENSSDUG00000002247	zgc:162730	99	35.627	ENSPMEG00000022425	sb:cb81	78	41.018	Poecilia_mexicana
ENSSDUG00000002247	zgc:162730	100	74.769	ENSPMEG00000000341	zgc:162730	100	74.074	Poecilia_mexicana
ENSSDUG00000002247	zgc:162730	100	74.306	ENSPREG00000021263	zgc:162730	100	73.611	Poecilia_reticulata
ENSSDUG00000002247	zgc:162730	99	34.679	ENSPREG00000017495	sb:cb81	79	39.535	Poecilia_reticulata
ENSSDUG00000002247	zgc:162730	100	77.083	ENSPNYG00000015553	zgc:162730	100	73.121	Pundamilia_nyererei
ENSSDUG00000002247	zgc:162730	99	36.957	ENSPNYG00000007502	sb:cb81	97	37.410	Pundamilia_nyererei
ENSSDUG00000002247	zgc:162730	100	50.386	ENSPNAG00000023018	zgc:162730	100	47.826	Pygocentrus_nattereri
ENSSDUG00000002247	zgc:162730	66	41.791	ENSPNAG00000000386	zfp36l1b	65	40.602	Pygocentrus_nattereri
ENSSDUG00000002247	zgc:162730	99	36.893	ENSPNAG00000030063	sb:cb81	97	36.675	Pygocentrus_nattereri
ENSSDUG00000002247	zgc:162730	99	33.967	ENSSFOG00015003179	sb:cb81	97	32.598	Scleropages_formosus
ENSSDUG00000002247	zgc:162730	100	83.565	ENSSMAG00000018612	zgc:162730	100	83.565	Scophthalmus_maximus
ENSSDUG00000002247	zgc:162730	57	34.016	ENSSMAG00000004403	sb:cb81	94	36.437	Scophthalmus_maximus
ENSSDUG00000002247	zgc:162730	98	32.949	ENSSLDG00000008496	zgc:114130	66	36.140	Seriola_lalandi_dorsalis
ENSSDUG00000002247	zgc:162730	100	99.537	ENSSLDG00000008502	zgc:162730	100	99.537	Seriola_lalandi_dorsalis
ENSSDUG00000002247	zgc:162730	99	34.483	ENSSLDG00000018035	sb:cb81	79	37.931	Seriola_lalandi_dorsalis
ENSSDUG00000002247	zgc:162730	66	38.462	ENSSPUG00000002037	ZFP36L1	68	38.686	Sphenodon_punctatus
ENSSDUG00000002247	zgc:162730	99	35.922	ENSSPAG00000013546	sb:cb81	65	43.682	Stegastes_partitus
ENSSDUG00000002247	zgc:162730	100	85.648	ENSSPAG00000006851	zgc:162730	100	85.648	Stegastes_partitus
ENSSDUG00000002247	zgc:162730	72	35.962	ENSTRUG00000022473	zgc:114130	63	36.630	Takifugu_rubripes
ENSSDUG00000002247	zgc:162730	99	35.208	ENSTRUG00000020720	sb:cb81	97	35.049	Takifugu_rubripes
ENSSDUG00000002247	zgc:162730	100	76.389	ENSTRUG00000021229	zgc:162730	100	76.157	Takifugu_rubripes
ENSSDUG00000002247	zgc:162730	79	36.615	ENSTNIG00000019802	sb:cb81	94	39.264	Tetraodon_nigroviridis
ENSSDUG00000002247	zgc:162730	96	69.952	ENSTNIG00000000183	zgc:162730	100	70.558	Tetraodon_nigroviridis
ENSSDUG00000002247	zgc:162730	66	41.971	ENSXETG00000016987	zfp36l1	68	39.560	Xenopus_tropicalis
ENSSDUG00000002247	zgc:162730	62	35.484	ENSXCOG00000010688	sb:cb81	86	39.062	Xiphophorus_couchianus
ENSSDUG00000002247	zgc:162730	100	73.380	ENSXCOG00000012791	zgc:162730	100	72.685	Xiphophorus_couchianus
ENSSDUG00000002247	zgc:162730	99	37.000	ENSXMAG00000004681	sb:cb81	79	42.308	Xiphophorus_maculatus
ENSSDUG00000002247	zgc:162730	100	73.843	ENSXMAG00000018206	zgc:162730	100	73.148	Xiphophorus_maculatus