EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002359 (Gene tree)
Gene ID: 111216334
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2634 bases
Position: chrBDQW01000025.1:2514448-2517081
Accession: 111216334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003110	MMR_HSR1	PF01926.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003203	-	729	-	ENSSDUP00000003130	242 (aa)	-	-
ENSSDUT00000003183	-	777	XM_022737833	ENSSDUP00000003110	258 (aa)	XP_022593554	-

Gene Model

Click here to download ENSSDUG00000002359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002359	-	100	96.183	ENSSDUG00000002417	-	99	96.183
ENSSDUG00000002359	-	99	33.582	ENSSDUG00000009840	-	60	34.211
ENSSDUG00000002359	-	99	32.090	ENSSDUG00000012708	zgc:153654	57	32.090

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002359	-	94	49.606	ENSACIG00000004521	-	90	49.606	Amphilophus_citrinellus
ENSSDUG00000002359	-	98	50.943	ENSACIG00000015237	-	92	53.441	Amphilophus_citrinellus
ENSSDUG00000002359	-	94	51.562	ENSACIG00000004408	-	89	51.562	Amphilophus_citrinellus
ENSSDUG00000002359	-	98	50.575	ENSACIG00000015616	-	94	51.737	Amphilophus_citrinellus
ENSSDUG00000002359	-	97	52.852	ENSACIG00000000741	-	93	52.852	Amphilophus_citrinellus
ENSSDUG00000002359	-	97	50.566	ENSACIG00000004444	-	96	50.566	Amphilophus_citrinellus
ENSSDUG00000002359	-	94	51.969	ENSACIG00000015684	-	91	51.575	Amphilophus_citrinellus
ENSSDUG00000002359	-	95	47.656	ENSACIG00000004501	-	90	47.656	Amphilophus_citrinellus
ENSSDUG00000002359	-	97	52.308	ENSACIG00000004426	-	89	51.923	Amphilophus_citrinellus
ENSSDUG00000002359	-	98	55.263	ENSAOCG00000002056	-	88	54.887	Amphiprion_ocellaris
ENSSDUG00000002359	-	98	52.471	ENSAPEG00000021053	-	93	52.091	Amphiprion_percula
ENSSDUG00000002359	-	98	59.701	ENSATEG00000002718	-	83	58.582	Anabas_testudineus
ENSSDUG00000002359	-	97	56.522	ENSATEG00000002869	-	94	56.522	Anabas_testudineus
ENSSDUG00000002359	-	99	54.851	ENSACLG00000010292	-	95	54.478	Astatotilapia_calliptera
ENSSDUG00000002359	-	99	48.727	ENSACLG00000016487	-	93	49.091	Astatotilapia_calliptera
ENSSDUG00000002359	-	98	55.556	ENSACLG00000018321	-	93	58.175	Astatotilapia_calliptera
ENSSDUG00000002359	-	96	47.177	ENSACLG00000002020	-	95	47.177	Astatotilapia_calliptera
ENSSDUG00000002359	-	84	43.363	ENSACLG00000016390	-	88	43.805	Astatotilapia_calliptera
ENSSDUG00000002359	-	96	45.560	ENSACLG00000027615	-	97	45.560	Astatotilapia_calliptera
ENSSDUG00000002359	-	89	35.102	ENSAMXG00000037563	-	85	34.855	Astyanax_mexicanus
ENSSDUG00000002359	-	95	45.703	ENSCSEG00000018832	-	95	45.703	Cynoglossus_semilaevis
ENSSDUG00000002359	-	93	44.488	ENSCVAG00000007214	-	98	44.269	Cyprinodon_variegatus
ENSSDUG00000002359	-	65	51.667	ENSCVAG00000014640	-	83	51.667	Cyprinodon_variegatus
ENSSDUG00000002359	-	94	45.312	ENSCVAG00000023166	-	97	45.312	Cyprinodon_variegatus
ENSSDUG00000002359	-	99	54.478	ENSCVAG00000016719	-	93	54.478	Cyprinodon_variegatus
ENSSDUG00000002359	-	98	36.531	ENSDARG00000092634	CABZ01000634.1	89	36.162	Danio_rerio
ENSSDUG00000002359	-	88	37.657	ENSDARG00000010729	CABZ01073795.1	82	37.238	Danio_rerio
ENSSDUG00000002359	-	88	33.878	ENSDARG00000095309	si:dkey-79f11.9	87	33.878	Danio_rerio
ENSSDUG00000002359	-	98	36.900	ENSDARG00000093857	si:dkey-79f11.10	83	36.531	Danio_rerio
ENSSDUG00000002359	-	88	39.749	ENSDARG00000107486	CR855320.3	81	39.749	Danio_rerio
ENSSDUG00000002359	-	77	39.904	ENSDARG00000015678	si:dkeyp-75b4.9	95	39.000	Danio_rerio
ENSSDUG00000002359	-	88	39.419	ENSDARG00000075791	si:dkey-79f11.5	76	39.004	Danio_rerio
ENSSDUG00000002359	-	88	35.102	ENSDARG00000029720	si:dkeyp-9d4.2	82	34.979	Danio_rerio
ENSSDUG00000002359	-	56	37.013	ENSDARG00000092361	si:dkey-79f11.7	65	37.013	Danio_rerio
ENSSDUG00000002359	-	99	39.405	ENSDARG00000095673	si:dkey-79f11.8	83	39.033	Danio_rerio
ENSSDUG00000002359	-	79	45.622	ENSFHEG00000019992	-	70	45.933	Fundulus_heteroclitus
ENSSDUG00000002359	-	95	47.244	ENSFHEG00000018078	-	94	46.304	Fundulus_heteroclitus
ENSSDUG00000002359	-	98	46.970	ENSFHEG00000018069	-	90	46.970	Fundulus_heteroclitus
ENSSDUG00000002359	-	95	49.225	ENSFHEG00000021105	-	87	49.225	Fundulus_heteroclitus
ENSSDUG00000002359	-	98	51.880	ENSGAFG00000019423	-	58	51.880	Gambusia_affinis
ENSSDUG00000002359	-	89	53.617	ENSGAFG00000019422	-	93	52.766	Gambusia_affinis
ENSSDUG00000002359	-	98	51.880	ENSGACG00000001319	-	98	51.880	Gasterosteus_aculeatus
ENSSDUG00000002359	-	98	51.128	ENSGACG00000012548	-	90	51.128	Gasterosteus_aculeatus
ENSSDUG00000002359	-	98	51.880	ENSGACG00000012556	-	85	51.880	Gasterosteus_aculeatus
ENSSDUG00000002359	-	90	49.590	ENSHBUG00000010945	-	90	49.590	Haplochromis_burtoni
ENSSDUG00000002359	-	67	32.044	ENSIPUG00000006725	-	89	32.044	Ictalurus_punctatus
ENSSDUG00000002359	-	89	40.664	ENSIPUG00000005624	-	89	40.249	Ictalurus_punctatus
ENSSDUG00000002359	-	89	41.079	ENSIPUG00000007632	-	69	40.664	Ictalurus_punctatus
ENSSDUG00000002359	-	89	41.494	ENSIPUG00000006852	-	75	41.494	Ictalurus_punctatus
ENSSDUG00000002359	-	94	44.841	ENSKMAG00000000369	-	94	44.841	Kryptolebias_marmoratus
ENSSDUG00000002359	-	94	49.606	ENSKMAG00000006729	-	94	48.819	Kryptolebias_marmoratus
ENSSDUG00000002359	-	93	44.841	ENSKMAG00000000325	-	90	44.841	Kryptolebias_marmoratus
ENSSDUG00000002359	-	95	58.268	ENSMAMG00000003570	-	90	57.087	Mastacembelus_armatus
ENSSDUG00000002359	-	98	55.390	ENSMAMG00000003546	-	89	55.390	Mastacembelus_armatus
ENSSDUG00000002359	-	98	49.621	ENSMZEG00005008301	-	99	49.242	Maylandia_zebra
ENSSDUG00000002359	-	97	49.808	ENSMZEG00005008329	-	99	49.808	Maylandia_zebra
ENSSDUG00000002359	-	98	55.894	ENSMZEG00005015498	-	94	55.894	Maylandia_zebra
ENSSDUG00000002359	-	96	53.414	ENSNBRG00000006414	-	88	53.414	Neolamprologus_brichardi
ENSSDUG00000002359	-	97	50.000	ENSNBRG00000006386	-	98	50.579	Neolamprologus_brichardi
ENSSDUG00000002359	-	90	51.029	ENSNBRG00000020781	-	98	51.029	Neolamprologus_brichardi
ENSSDUG00000002359	-	95	57.588	ENSNBRG00000023290	-	87	57.588	Neolamprologus_brichardi
ENSSDUG00000002359	-	98	50.775	ENSNBRG00000022075	-	94	50.769	Neolamprologus_brichardi
ENSSDUG00000002359	-	97	50.593	ENSNBRG00000020806	-	89	50.593	Neolamprologus_brichardi
ENSSDUG00000002359	-	95	44.141	ENSNBRG00000020744	-	87	44.141	Neolamprologus_brichardi
ENSSDUG00000002359	-	98	56.015	ENSNBRG00000024253	-	90	56.015	Neolamprologus_brichardi
ENSSDUG00000002359	-	91	49.593	ENSONIG00000017465	-	99	49.593	Oreochromis_niloticus
ENSSDUG00000002359	-	98	48.289	ENSONIG00000015247	-	93	47.909	Oreochromis_niloticus
ENSSDUG00000002359	-	90	47.679	ENSONIG00000016843	-	98	47.679	Oreochromis_niloticus
ENSSDUG00000002359	-	94	50.988	ENSONIG00000015167	-	98	50.593	Oreochromis_niloticus
ENSSDUG00000002359	-	67	53.591	ENSONIG00000013227	-	97	53.409	Oreochromis_niloticus
ENSSDUG00000002359	-	98	52.788	ENSONIG00000018790	-	90	53.160	Oreochromis_niloticus
ENSSDUG00000002359	-	94	49.206	ENSONIG00000015371	-	99	49.206	Oreochromis_niloticus
ENSSDUG00000002359	-	90	49.794	ENSONIG00000012317	-	98	49.383	Oreochromis_niloticus
ENSSDUG00000002359	-	94	50.787	ENSONIG00000012319	-	98	50.394	Oreochromis_niloticus
ENSSDUG00000002359	-	96	45.385	ENSPMGG00000002695	-	98	44.231	Periophthalmus_magnuspinnatus
ENSSDUG00000002359	-	98	44.061	ENSPMGG00000004994	-	91	43.295	Periophthalmus_magnuspinnatus
ENSSDUG00000002359	-	99	42.912	ENSPMGG00000022341	-	79	42.912	Periophthalmus_magnuspinnatus
ENSSDUG00000002359	-	98	46.591	ENSPMGG00000012906	-	94	46.591	Periophthalmus_magnuspinnatus
ENSSDUG00000002359	-	98	46.442	ENSPFOG00000003841	-	91	46.067	Poecilia_formosa
ENSSDUG00000002359	-	97	53.053	ENSPFOG00000015493	-	90	52.672	Poecilia_formosa
ENSSDUG00000002359	-	97	54.717	ENSPFOG00000015382	-	92	54.340	Poecilia_formosa
ENSSDUG00000002359	-	98	45.756	ENSPFOG00000003807	-	95	45.756	Poecilia_formosa
ENSSDUG00000002359	-	94	47.619	ENSPFOG00000015455	-	85	47.619	Poecilia_formosa
ENSSDUG00000002359	-	96	48.810	ENSPLAG00000018274	-	92	48.413	Poecilia_latipinna
ENSSDUG00000002359	-	98	54.104	ENSPMEG00000018635	-	93	53.731	Poecilia_mexicana
ENSSDUG00000002359	-	94	47.619	ENSPMEG00000018626	-	90	47.619	Poecilia_mexicana
ENSSDUG00000002359	-	95	44.751	ENSPREG00000005137	-	89	44.898	Poecilia_reticulata
ENSSDUG00000002359	-	98	49.049	ENSPNYG00000024019	-	90	49.430	Pundamilia_nyererei
ENSSDUG00000002359	-	98	49.615	ENSPNYG00000005478	-	92	49.615	Pundamilia_nyererei
ENSSDUG00000002359	-	95	57.588	ENSPNYG00000001584	-	91	56.809	Pundamilia_nyererei
ENSSDUG00000002359	-	99	38.077	ENSPNAG00000009266	-	97	38.077	Pygocentrus_nattereri
ENSSDUG00000002359	-	90	36.364	ENSPNAG00000006327	-	63	35.968	Pygocentrus_nattereri
ENSSDUG00000002359	-	100	92.308	ENSSLDG00000008952	-	95	91.154	Seriola_lalandi_dorsalis
ENSSDUG00000002359	-	98	46.816	ENSSLDG00000016397	-	98	47.191	Seriola_lalandi_dorsalis
ENSSDUG00000002359	-	98	50.951	ENSSPAG00000012856	-	93	50.570	Stegastes_partitus
ENSSDUG00000002359	-	96	49.808	ENSSPAG00000012915	-	98	49.425	Stegastes_partitus
ENSSDUG00000002359	-	72	44.670	ENSXCOG00000008517	-	61	44.670	Xiphophorus_couchianus
ENSSDUG00000002359	-	83	50.442	ENSXCOG00000019639	-	77	53.000	Xiphophorus_couchianus
ENSSDUG00000002359	-	61	43.030	ENSXCOG00000003913	-	87	43.030	Xiphophorus_couchianus
ENSSDUG00000002359	-	97	52.471	ENSXMAG00000009971	-	69	52.091	Xiphophorus_maculatus
ENSSDUG00000002359	-	98	53.933	ENSXMAG00000009973	-	94	53.030	Xiphophorus_maculatus
ENSSDUG00000002359	-	99	47.407	ENSXMAG00000029117	-	95	47.037	Xiphophorus_maculatus