EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002378 (Gene tree)
Gene ID: 111217911
Gene Symbol: -
Alias: -
Full Name: calnexin-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 8614 bases
Position: chrBDQW01000050.1:1910126-1918739
Accession: 111217911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003083	Calreticulin	PF00262.18	1.9e-163	1	1
ENSSDUP00000003096	Calreticulin	PF00262.18	3.4e-163	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003169	-	2353	XM_022739940	ENSSDUP00000003096	741 (aa)	XP_022595661	-
ENSSDUT00000003157	-	2302	-	ENSSDUP00000003083	724 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002378	-	54	38.191	ENSSDUG00000010450	calr3b	79	37.688
ENSSDUG00000002378	-	75	62.321	ENSSDUG00000014213	canx	75	67.880
ENSSDUG00000002378	-	56	35.154	ENSSDUG00000000052	calr	80	37.931
ENSSDUG00000002378	-	54	37.215	ENSSDUG00000019247	-	79	37.215

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002378	-	54	39.798	ENSCAFG00000017093	CALR	82	39.000	Canis_familiaris
ENSSDUG00000002378	-	56	37.108	ENSDARG00000103979	calr3a	80	37.469	Danio_rerio
ENSSDUG00000002378	-	71	48.405	FBgn0264077	Cnx14D	70	53.863	Drosophila_melanogaster
ENSSDUG00000002378	-	55	38.084	ENSEBUG00000008568	calr3a	79	38.084	Eptatretus_burgeri
ENSSDUG00000002378	-	56	39.163	ENSMAMG00000003716	-	79	39.163	Mastacembelus_armatus
ENSSDUG00000002378	-	56	38.631	ENSMMOG00000020031	-	78	38.821	Mola_mola
ENSSDUG00000002378	-	54	40.050	ENSMLUG00000012776	-	80	40.150	Myotis_lucifugus
ENSSDUG00000002378	-	56	39.655	ENSOMEG00000010424	-	80	39.655	Oryzias_melastigma
ENSSDUG00000002378	-	78	65.548	ENSPSIG00000009344	-	81	66.486	Pelodiscus_sinensis
ENSSDUG00000002378	-	65	68.590	ENSPSIG00000003895	-	80	68.737	Pelodiscus_sinensis
ENSSDUG00000002378	-	54	33.252	ENSPNAG00000016813	-	82	36.341	Pygocentrus_nattereri
ENSSDUG00000002378	-	54	35.878	ENSSMAG00000005047	calr3a	72	37.135	Scophthalmus_maximus
ENSSDUG00000002378	-	98	98.900	ENSSLDG00000020527	-	97	98.900	Seriola_lalandi_dorsalis
ENSSDUG00000002378	-	80	80.969	ENSTRUG00000003449	-	75	80.541	Takifugu_rubripes
ENSSDUG00000002378	-	54	38.734	ENSTRUG00000004597	-	77	38.734	Takifugu_rubripes