EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002411 (Gene tree)
Gene ID: -
Gene Symbol: raly
Alias: zgc:103445
Full Name: RNA-binding protein Raly-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 69155 bases
Position: chrBDQW01001254.1:232764-301918
Accession: 111238281
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003132	RRM_1	PF00076.22	2.9e-11	1	1
ENSSDUP00000003146	RRM_1	PF00076.22	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003219	-	3816	XM_022767711	ENSSDUP00000003146	295 (aa)	XP_022623432	-
ENSSDUT00000003205	-	3013	-	ENSSDUP00000003132	295 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002411	raly	71	52.294	ENSSDUG00000006730	-	67	51.389
ENSSDUG00000002411	raly	96	51.712	ENSSDUG00000007587	-	79	57.391
ENSSDUG00000002411	raly	89	46.125	ENSSDUG00000001723	-	68	51.402
ENSSDUG00000002411	raly	96	53.535	ENSSDUG00000012473	-	82	60.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002411	raly	72	78.037	ENSG00000125970	RALY	100	89.888	Homo_sapiens
ENSSDUG00000002411	raly	99	82.935	ENSAPOG00000001026	raly	99	80.887	Acanthochromis_polyacanthus
ENSSDUG00000002411	raly	93	61.667	ENSAMEG00000009050	RALY	73	75.111	Ailuropoda_melanoleuca
ENSSDUG00000002411	raly	75	93.665	ENSACIG00000024288	raly	86	93.665	Amphilophus_citrinellus
ENSSDUG00000002411	raly	95	83.871	ENSAOCG00000009883	raly	85	82.796	Amphiprion_ocellaris
ENSSDUG00000002411	raly	95	84.588	ENSAPEG00000024106	raly	86	83.513	Amphiprion_percula
ENSSDUG00000002411	raly	95	83.502	ENSATEG00000004870	raly	96	82.492	Anabas_testudineus
ENSSDUG00000002411	raly	89	69.888	ENSAPLG00000012983	RALY	82	75.424	Anas_platyrhynchos
ENSSDUG00000002411	raly	91	68.773	ENSACAG00000008983	RALY	73	74.576	Anolis_carolinensis
ENSSDUG00000002411	raly	93	61.905	ENSANAG00000019376	RALY	76	71.739	Aotus_nancymaae
ENSSDUG00000002411	raly	95	88.256	ENSACLG00000007561	raly	87	87.544	Astatotilapia_calliptera
ENSSDUG00000002411	raly	93	58.362	ENSBTAG00000016524	RALY	75	67.532	Bos_taurus
ENSSDUG00000002411	raly	72	70.093	ENSCJAG00000009449	-	72	64.783	Callithrix_jacchus
ENSSDUG00000002411	raly	72	77.570	ENSCJAG00000018361	-	73	71.739	Callithrix_jacchus
ENSSDUG00000002411	raly	93	64.460	ENSCAFG00000007490	RALY	73	77.419	Canis_familiaris
ENSSDUG00000002411	raly	93	64.460	ENSCAFG00020005069	RALY	73	77.419	Canis_lupus_dingo
ENSSDUG00000002411	raly	73	78.341	ENSCHIG00000026609	RALY	77	73.593	Capra_hircus
ENSSDUG00000002411	raly	73	76.959	ENSTSYG00000002598	RALY	73	76.498	Carlito_syrichta
ENSSDUG00000002411	raly	91	55.839	ENSCAPG00000008110	RALY	94	64.977	Cavia_aperea
ENSSDUG00000002411	raly	73	77.880	ENSCPOG00000000309	RALY	94	70.507	Cavia_porcellus
ENSSDUG00000002411	raly	72	77.570	ENSCCAG00000024548	RALY	75	71.739	Cebus_capucinus
ENSSDUG00000002411	raly	72	77.570	ENSCATG00000031769	RALY	73	71.739	Cercocebus_atys
ENSSDUG00000002411	raly	73	77.419	ENSCLAG00000016899	RALY	72	72.926	Chinchilla_lanigera
ENSSDUG00000002411	raly	72	77.570	ENSCSAG00000012199	RALY	72	71.739	Chlorocebus_sabaeus
ENSSDUG00000002411	raly	73	70.046	ENSCHOG00000000266	RALY	92	68.519	Choloepus_hoffmanni
ENSSDUG00000002411	raly	93	68.231	ENSCPBG00000019164	RALY	87	75.000	Chrysemys_picta_bellii
ENSSDUG00000002411	raly	72	77.570	ENSCANG00000037952	RALY	76	71.739	Colobus_angolensis_palliatus
ENSSDUG00000002411	raly	73	76.959	ENSCGRG00001014652	Raly	71	72.174	Cricetulus_griseus_chok1gshd
ENSSDUG00000002411	raly	73	76.959	ENSCGRG00000011726	Raly	71	72.174	Cricetulus_griseus_crigri
ENSSDUG00000002411	raly	97	73.264	ENSDARG00000059972	raly	83	84.848	Danio_rerio
ENSSDUG00000002411	raly	93	58.596	ENSDNOG00000046782	-	72	69.585	Dasypus_novemcinctus
ENSSDUG00000002411	raly	73	76.498	ENSDNOG00000003227	-	77	75.576	Dasypus_novemcinctus
ENSSDUG00000002411	raly	73	71.889	ENSDORG00000013400	Raly	94	70.968	Dipodomys_ordii
ENSSDUG00000002411	raly	65	61.026	ENSETEG00000001919	-	63	60.513	Echinops_telfairi
ENSSDUG00000002411	raly	73	66.359	ENSETEG00000012464	-	98	65.438	Echinops_telfairi
ENSSDUG00000002411	raly	93	63.481	ENSEASG00005008501	RALY	76	74.348	Equus_asinus_asinus
ENSSDUG00000002411	raly	93	63.481	ENSECAG00000030217	-	76	74.348	Equus_caballus
ENSSDUG00000002411	raly	93	63.481	ENSECAG00000012357	RALY	76	74.348	Equus_caballus
ENSSDUG00000002411	raly	93	63.481	ENSECAG00000037642	-	76	74.348	Equus_caballus
ENSSDUG00000002411	raly	72	65.258	ENSEEUG00000005356	RALY	69	61.502	Erinaceus_europaeus
ENSSDUG00000002411	raly	99	73.139	ENSELUG00000011138	raly	85	81.673	Esox_lucius
ENSSDUG00000002411	raly	93	63.918	ENSFCAG00000025252	RALY	72	77.880	Felis_catus
ENSSDUG00000002411	raly	73	75.115	ENSFDAG00000010175	RALY	100	91.765	Fukomys_damarensis
ENSSDUG00000002411	raly	75	86.425	ENSFHEG00000018618	raly	84	86.425	Fundulus_heteroclitus
ENSSDUG00000002411	raly	75	68.636	ENSGMOG00000012589	raly	100	68.636	Gadus_morhua
ENSSDUG00000002411	raly	97	68.041	ENSGALG00000033696	RALY	87	76.271	Gallus_gallus
ENSSDUG00000002411	raly	95	76.868	ENSGACG00000003636	raly	97	76.512	Gasterosteus_aculeatus
ENSSDUG00000002411	raly	91	69.145	ENSGAGG00000016266	RALY	73	75.000	Gopherus_agassizii
ENSSDUG00000002411	raly	72	77.570	ENSGGOG00000022709	RALY	75	71.739	Gorilla_gorilla
ENSSDUG00000002411	raly	95	73.377	ENSHBUG00000021321	raly	99	72.727	Haplochromis_burtoni
ENSSDUG00000002411	raly	73	76.498	ENSHGLG00000017779	-	94	69.585	Heterocephalus_glaber_female
ENSSDUG00000002411	raly	73	66.359	ENSHGLG00000021175	-	69	65.438	Heterocephalus_glaber_female
ENSSDUG00000002411	raly	73	55.760	ENSHGLG00100003829	-	70	54.839	Heterocephalus_glaber_male
ENSSDUG00000002411	raly	73	76.498	ENSHGLG00100003933	RALY	100	77.070	Heterocephalus_glaber_male
ENSSDUG00000002411	raly	92	49.446	ENSHGLG00100000278	-	76	53.488	Heterocephalus_glaber_male
ENSSDUG00000002411	raly	79	56.652	ENSHCOG00000012268	raly	95	54.701	Hippocampus_comes
ENSSDUG00000002411	raly	73	77.880	ENSSTOG00000008810	RALY	70	76.959	Ictidomys_tridecemlineatus
ENSSDUG00000002411	raly	73	71.889	ENSJJAG00000008473	Raly	100	76.433	Jaculus_jaculus
ENSSDUG00000002411	raly	75	80.909	ENSKMAG00000015656	raly	82	80.909	Kryptolebias_marmoratus
ENSSDUG00000002411	raly	75	95.000	ENSLBEG00000022656	raly	85	95.000	Labrus_bergylta
ENSSDUG00000002411	raly	97	65.278	ENSLACG00000008596	RALY	77	77.928	Latimeria_chalumnae
ENSSDUG00000002411	raly	99	75.085	ENSLOCG00000007219	raly	83	84.681	Lepisosteus_oculatus
ENSSDUG00000002411	raly	93	61.889	ENSLAFG00000000321	RALY	68	77.880	Loxodonta_africana
ENSSDUG00000002411	raly	72	78.037	ENSMFAG00000033131	RALY	73	72.174	Macaca_fascicularis
ENSSDUG00000002411	raly	72	78.037	ENSMMUG00000018093	RALY	74	72.174	Macaca_mulatta
ENSSDUG00000002411	raly	72	78.037	ENSMNEG00000044988	RALY	74	72.174	Macaca_nemestrina
ENSSDUG00000002411	raly	72	77.570	ENSMLEG00000028900	RALY	73	71.739	Mandrillus_leucophaeus
ENSSDUG00000002411	raly	95	76.289	ENSMAMG00000012529	raly	83	76.289	Mastacembelus_armatus
ENSSDUG00000002411	raly	95	70.312	ENSMZEG00005016550	raly	99	70.000	Maylandia_zebra
ENSSDUG00000002411	raly	99	62.581	ENSMGAG00000002214	RALY	73	78.027	Meleagris_gallopavo
ENSSDUG00000002411	raly	73	71.889	ENSMAUG00000005739	Raly	94	70.968	Mesocricetus_auratus
ENSSDUG00000002411	raly	93	64.261	ENSMICG00000039074	RALY	77	74.459	Microcebus_murinus
ENSSDUG00000002411	raly	73	76.959	ENSMOCG00000009450	Raly	71	72.174	Microtus_ochrogaster
ENSSDUG00000002411	raly	74	93.578	ENSMMOG00000013788	raly	84	93.578	Mola_mola
ENSSDUG00000002411	raly	84	66.667	ENSMODG00000002819	-	84	66.939	Monodelphis_domestica
ENSSDUG00000002411	raly	100	89.831	ENSMALG00000007071	raly	75	87.458	Monopterus_albus
ENSSDUG00000002411	raly	73	76.498	MGP_CAROLIEiJ_G0024519	Raly	100	77.707	Mus_caroli
ENSSDUG00000002411	raly	73	76.959	ENSMUSG00000027593	Raly	100	77.707	Mus_musculus
ENSSDUG00000002411	raly	73	76.959	MGP_PahariEiJ_G0025963	Raly	100	77.707	Mus_pahari
ENSSDUG00000002411	raly	73	76.959	MGP_SPRETEiJ_G0025441	Raly	100	77.707	Mus_spretus
ENSSDUG00000002411	raly	93	64.808	ENSMPUG00000017820	RALY	73	77.880	Mustela_putorius_furo
ENSSDUG00000002411	raly	93	64.460	ENSMLUG00000005330	-	73	78.341	Myotis_lucifugus
ENSSDUG00000002411	raly	93	58.571	ENSMLUG00000027895	-	72	68.692	Myotis_lucifugus
ENSSDUG00000002411	raly	73	71.889	ENSNGAG00000001263	Raly	94	70.968	Nannospalax_galili
ENSSDUG00000002411	raly	95	73.701	ENSNBRG00000014761	raly	99	73.052	Neolamprologus_brichardi
ENSSDUG00000002411	raly	80	56.723	ENSNLEG00000010031	-	66	66.667	Nomascus_leucogenys
ENSSDUG00000002411	raly	74	75.225	ENSOPRG00000008423	RALY	75	71.861	Ochotona_princeps
ENSSDUG00000002411	raly	73	73.272	ENSODEG00000008369	-	71	72.350	Octodon_degus
ENSSDUG00000002411	raly	63	55.789	ENSODEG00000011160	-	70	55.263	Octodon_degus
ENSSDUG00000002411	raly	72	61.111	ENSODEG00000012831	-	100	60.648	Octodon_degus
ENSSDUG00000002411	raly	100	87.458	ENSONIG00000004416	raly	100	86.441	Oreochromis_niloticus
ENSSDUG00000002411	raly	73	77.880	ENSOCUG00000000477	RALY	61	73.043	Oryctolagus_cuniculus
ENSSDUG00000002411	raly	72	79.167	ENSOGAG00000032337	RALY	68	78.241	Otolemur_garnettii
ENSSDUG00000002411	raly	73	78.341	ENSOARG00000008957	RALY	77	73.593	Ovis_aries
ENSSDUG00000002411	raly	72	77.570	ENSPPAG00000034951	RALY	74	71.739	Pan_paniscus
ENSSDUG00000002411	raly	93	63.918	ENSPPRG00000014593	RALY	72	77.880	Panthera_pardus
ENSSDUG00000002411	raly	93	63.918	ENSPTIG00000021910	RALY	72	77.880	Panthera_tigris_altaica
ENSSDUG00000002411	raly	72	77.570	ENSPTRG00000013410	RALY	74	71.739	Pan_troglodytes
ENSSDUG00000002411	raly	72	77.570	ENSPANG00000018093	RALY	73	71.739	Papio_anubis
ENSSDUG00000002411	raly	97	74.216	ENSPKIG00000004894	raly	82	84.416	Paramormyrops_kingsleyae
ENSSDUG00000002411	raly	83	65.370	ENSPSIG00000017714	RALY	84	67.206	Pelodiscus_sinensis
ENSSDUG00000002411	raly	73	71.889	ENSPEMG00000021466	Raly	69	70.968	Peromyscus_maniculatus_bairdii
ENSSDUG00000002411	raly	84	69.880	ENSPCIG00000011153	-	83	71.610	Phascolarctos_cinereus
ENSSDUG00000002411	raly	72	77.570	ENSPPYG00000010932	RALY	75	71.739	Pongo_abelii
ENSSDUG00000002411	raly	73	66.359	ENSPCAG00000016867	RALY	71	65.438	Procavia_capensis
ENSSDUG00000002411	raly	93	63.574	ENSPCOG00000016363	RALY	77	73.593	Propithecus_coquereli
ENSSDUG00000002411	raly	93	64.460	ENSPVAG00000015827	RALY	73	77.419	Pteropus_vampyrus
ENSSDUG00000002411	raly	95	69.375	ENSPNYG00000011247	raly	99	69.062	Pundamilia_nyererei
ENSSDUG00000002411	raly	98	70.790	ENSPNAG00000011812	raly	81	82.096	Pygocentrus_nattereri
ENSSDUG00000002411	raly	73	76.498	ENSRNOG00000017405	Raly	73	71.739	Rattus_norvegicus
ENSSDUG00000002411	raly	72	77.103	ENSRBIG00000030203	RALY	72	71.304	Rhinopithecus_bieti
ENSSDUG00000002411	raly	72	77.103	ENSRROG00000038781	RALY	72	71.304	Rhinopithecus_roxellana
ENSSDUG00000002411	raly	72	78.037	ENSSBOG00000001418	RALY	74	72.174	Saimiri_boliviensis_boliviensis
ENSSDUG00000002411	raly	73	70.698	ENSSHAG00000016830	RALY	68	71.163	Sarcophilus_harrisii
ENSSDUG00000002411	raly	92	78.229	ENSSFOG00015012304	raly	86	85.281	Scleropages_formosus
ENSSDUG00000002411	raly	100	85.000	ENSSMAG00000001107	raly	100	84.000	Scophthalmus_maximus
ENSSDUG00000002411	raly	95	97.163	ENSSLDG00000017872	raly	94	97.163	Seriola_lalandi_dorsalis
ENSSDUG00000002411	raly	72	61.682	ENSSARG00000002763	-	69	61.215	Sorex_araneus
ENSSDUG00000002411	raly	95	67.730	ENSSPUG00000006251	RALY	86	77.578	Sphenodon_punctatus
ENSSDUG00000002411	raly	66	90.256	ENSSPAG00000022480	-	76	90.256	Stegastes_partitus
ENSSDUG00000002411	raly	73	78.802	ENSSSCG00000007275	RALY	69	74.348	Sus_scrofa
ENSSDUG00000002411	raly	73	80.465	ENSTGUG00000003715	RALY	99	80.465	Taeniopygia_guttata
ENSSDUG00000002411	raly	73	61.751	ENSTBEG00000009812	RALY	69	60.829	Tupaia_belangeri
ENSSDUG00000002411	raly	72	77.315	ENSTTRG00000006590	RALY	71	76.389	Tursiops_truncatus
ENSSDUG00000002411	raly	73	78.341	ENSUAMG00000006993	RALY	75	77.419	Ursus_americanus
ENSSDUG00000002411	raly	93	64.460	ENSUMAG00000024106	RALY	73	77.419	Ursus_maritimus
ENSSDUG00000002411	raly	57	75.581	ENSVPAG00000000373	RALY	58	74.419	Vicugna_pacos
ENSSDUG00000002411	raly	93	64.460	ENSVVUG00000004546	RALY	73	77.419	Vulpes_vulpes
ENSSDUG00000002411	raly	92	62.847	ENSXETG00000019514	raly	85	69.323	Xenopus_tropicalis