EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002417 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 2346 bases
Position: chrBDQW01000025.1:2547709-2550054
Accession: 111236268
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003176	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003249	-	792	XM_022764946	ENSSDUP00000003176	263 (aa)	XP_022620667	-

Gene Model

Click here to download ENSSDUG00000002417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002417's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002417	-	99	32.963	ENSSDUG00000012708	zgc:153654	57	32.963
ENSSDUG00000002417	-	99	96.183	ENSSDUG00000002359	-	100	96.183
ENSSDUG00000002417	-	99	33.457	ENSSDUG00000009840	-	61	33.457

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002417	-	94	50.781	ENSACIG00000004408	-	89	50.781	Amphilophus_citrinellus
ENSSDUG00000002417	-	95	48.828	ENSACIG00000004501	-	90	48.828	Amphilophus_citrinellus
ENSSDUG00000002417	-	98	52.453	ENSACIG00000015237	-	92	55.061	Amphilophus_citrinellus
ENSSDUG00000002417	-	98	50.000	ENSACIG00000015616	-	94	52.510	Amphilophus_citrinellus
ENSSDUG00000002417	-	97	53.232	ENSACIG00000000741	-	93	53.232	Amphilophus_citrinellus
ENSSDUG00000002417	-	97	50.566	ENSACIG00000004444	-	96	50.566	Amphilophus_citrinellus
ENSSDUG00000002417	-	94	49.606	ENSACIG00000004521	-	90	49.606	Amphilophus_citrinellus
ENSSDUG00000002417	-	94	52.756	ENSACIG00000015684	-	91	52.362	Amphilophus_citrinellus
ENSSDUG00000002417	-	98	51.894	ENSACIG00000004426	-	89	52.308	Amphilophus_citrinellus
ENSSDUG00000002417	-	98	55.224	ENSAOCG00000002056	-	89	55.224	Amphiprion_ocellaris
ENSSDUG00000002417	-	98	53.208	ENSAPEG00000021053	-	94	52.830	Amphiprion_percula
ENSSDUG00000002417	-	98	60.967	ENSATEG00000002718	-	84	59.851	Anabas_testudineus
ENSSDUG00000002417	-	97	56.863	ENSATEG00000002869	-	94	56.863	Anabas_testudineus
ENSSDUG00000002417	-	97	57.634	ENSACLG00000018321	-	93	59.848	Astatotilapia_calliptera
ENSSDUG00000002417	-	95	46.332	ENSACLG00000027615	-	97	46.332	Astatotilapia_calliptera
ENSSDUG00000002417	-	95	46.825	ENSACLG00000002020	-	95	46.825	Astatotilapia_calliptera
ENSSDUG00000002417	-	84	43.363	ENSACLG00000016390	-	88	43.805	Astatotilapia_calliptera
ENSSDUG00000002417	-	99	56.667	ENSACLG00000010292	-	95	56.296	Astatotilapia_calliptera
ENSSDUG00000002417	-	95	51.181	ENSACLG00000016487	-	93	49.091	Astatotilapia_calliptera
ENSSDUG00000002417	-	89	35.102	ENSAMXG00000037563	-	85	34.855	Astyanax_mexicanus
ENSSDUG00000002417	-	94	45.703	ENSCSEG00000018832	-	95	45.703	Cynoglossus_semilaevis
ENSSDUG00000002417	-	92	44.882	ENSCVAG00000007214	-	98	44.664	Cyprinodon_variegatus
ENSSDUG00000002417	-	65	52.222	ENSCVAG00000014640	-	83	52.222	Cyprinodon_variegatus
ENSSDUG00000002417	-	94	46.094	ENSCVAG00000023166	-	97	46.094	Cyprinodon_variegatus
ENSSDUG00000002417	-	98	55.970	ENSCVAG00000016719	-	93	55.970	Cyprinodon_variegatus
ENSSDUG00000002417	-	98	36.742	ENSDARG00000107486	CR855320.3	89	36.742	Danio_rerio
ENSSDUG00000002417	-	77	40.385	ENSDARG00000015678	si:dkeyp-75b4.9	95	39.500	Danio_rerio
ENSSDUG00000002417	-	87	37.657	ENSDARG00000010729	CABZ01073795.1	82	37.238	Danio_rerio
ENSSDUG00000002417	-	99	38.519	ENSDARG00000095673	si:dkey-79f11.8	83	38.148	Danio_rerio
ENSSDUG00000002417	-	88	34.694	ENSDARG00000095309	si:dkey-79f11.9	87	34.694	Danio_rerio
ENSSDUG00000002417	-	57	35.714	ENSDARG00000092361	si:dkey-79f11.7	65	35.714	Danio_rerio
ENSSDUG00000002417	-	88	34.568	ENSDARG00000029720	si:dkeyp-9d4.2	82	34.568	Danio_rerio
ENSSDUG00000002417	-	98	36.397	ENSDARG00000093857	si:dkey-79f11.10	83	36.029	Danio_rerio
ENSSDUG00000002417	-	98	36.397	ENSDARG00000092634	CABZ01000634.1	90	36.029	Danio_rerio
ENSSDUG00000002417	-	88	38.589	ENSDARG00000075791	si:dkey-79f11.5	76	38.174	Danio_rerio
ENSSDUG00000002417	-	94	46.457	ENSFHEG00000018078	-	94	45.525	Fundulus_heteroclitus
ENSSDUG00000002417	-	94	48.450	ENSFHEG00000021105	-	87	48.450	Fundulus_heteroclitus
ENSSDUG00000002417	-	98	47.547	ENSFHEG00000018069	-	90	47.547	Fundulus_heteroclitus
ENSSDUG00000002417	-	79	44.954	ENSFHEG00000019992	-	70	45.238	Fundulus_heteroclitus
ENSSDUG00000002417	-	89	52.720	ENSGAFG00000019422	-	93	51.883	Gambusia_affinis
ENSSDUG00000002417	-	98	50.752	ENSGAFG00000019423	-	58	51.880	Gambusia_affinis
ENSSDUG00000002417	-	98	52.060	ENSGACG00000012556	-	86	52.060	Gasterosteus_aculeatus
ENSSDUG00000002417	-	98	51.128	ENSGACG00000012548	-	90	51.128	Gasterosteus_aculeatus
ENSSDUG00000002417	-	98	52.060	ENSGACG00000001319	-	99	52.060	Gasterosteus_aculeatus
ENSSDUG00000002417	-	90	50.410	ENSHBUG00000010945	-	90	50.410	Haplochromis_burtoni
ENSSDUG00000002417	-	89	41.079	ENSIPUG00000006852	-	75	40.833	Ictalurus_punctatus
ENSSDUG00000002417	-	89	40.417	ENSIPUG00000005624	-	89	40.000	Ictalurus_punctatus
ENSSDUG00000002417	-	89	40.417	ENSIPUG00000007632	-	69	40.000	Ictalurus_punctatus
ENSSDUG00000002417	-	67	31.111	ENSIPUG00000006725	-	89	31.111	Ictalurus_punctatus
ENSSDUG00000002417	-	93	45.238	ENSKMAG00000000325	-	90	45.238	Kryptolebias_marmoratus
ENSSDUG00000002417	-	94	50.394	ENSKMAG00000006729	-	94	49.606	Kryptolebias_marmoratus
ENSSDUG00000002417	-	94	45.238	ENSKMAG00000000369	-	94	45.238	Kryptolebias_marmoratus
ENSSDUG00000002417	-	95	59.449	ENSMAMG00000003570	-	90	58.268	Mastacembelus_armatus
ENSSDUG00000002417	-	98	57.407	ENSMAMG00000003546	-	89	57.407	Mastacembelus_armatus
ENSSDUG00000002417	-	97	57.197	ENSMZEG00005015498	-	94	57.197	Maylandia_zebra
ENSSDUG00000002417	-	98	50.000	ENSMZEG00005008301	-	99	49.621	Maylandia_zebra
ENSSDUG00000002417	-	97	50.192	ENSMZEG00005008329	-	99	50.192	Maylandia_zebra
ENSSDUG00000002417	-	98	56.929	ENSNBRG00000024253	-	90	56.929	Neolamprologus_brichardi
ENSSDUG00000002417	-	95	45.312	ENSNBRG00000020744	-	87	45.312	Neolamprologus_brichardi
ENSSDUG00000002417	-	95	58.140	ENSNBRG00000023290	-	87	58.140	Neolamprologus_brichardi
ENSSDUG00000002417	-	97	49.805	ENSNBRG00000020806	-	89	49.805	Neolamprologus_brichardi
ENSSDUG00000002417	-	96	50.965	ENSNBRG00000006386	-	98	51.351	Neolamprologus_brichardi
ENSSDUG00000002417	-	90	51.440	ENSNBRG00000020781	-	98	51.440	Neolamprologus_brichardi
ENSSDUG00000002417	-	96	52.569	ENSNBRG00000006414	-	88	52.569	Neolamprologus_brichardi
ENSSDUG00000002417	-	98	51.154	ENSNBRG00000022075	-	94	51.154	Neolamprologus_brichardi
ENSSDUG00000002417	-	90	50.617	ENSONIG00000012317	-	98	50.206	Oreochromis_niloticus
ENSSDUG00000002417	-	97	48.669	ENSONIG00000015247	-	93	48.289	Oreochromis_niloticus
ENSSDUG00000002417	-	98	52.941	ENSONIG00000018790	-	91	54.044	Oreochromis_niloticus
ENSSDUG00000002417	-	94	49.206	ENSONIG00000015371	-	99	49.206	Oreochromis_niloticus
ENSSDUG00000002417	-	94	51.779	ENSONIG00000015167	-	98	51.383	Oreochromis_niloticus
ENSSDUG00000002417	-	67	54.696	ENSONIG00000013227	-	97	54.545	Oreochromis_niloticus
ENSSDUG00000002417	-	94	50.787	ENSONIG00000012319	-	98	50.394	Oreochromis_niloticus
ENSSDUG00000002417	-	89	47.479	ENSONIG00000016843	-	98	47.479	Oreochromis_niloticus
ENSSDUG00000002417	-	91	49.593	ENSONIG00000017465	-	99	49.593	Oreochromis_niloticus
ENSSDUG00000002417	-	95	45.211	ENSPMGG00000002695	-	98	44.061	Periophthalmus_magnuspinnatus
ENSSDUG00000002417	-	98	43.939	ENSPMGG00000004994	-	92	43.182	Periophthalmus_magnuspinnatus
ENSSDUG00000002417	-	98	47.925	ENSPMGG00000012906	-	94	47.925	Periophthalmus_magnuspinnatus
ENSSDUG00000002417	-	99	43.561	ENSPMGG00000022341	-	80	43.561	Periophthalmus_magnuspinnatus
ENSSDUG00000002417	-	96	53.053	ENSPFOG00000015493	-	90	52.290	Poecilia_formosa
ENSSDUG00000002417	-	98	46.863	ENSPFOG00000003807	-	95	46.863	Poecilia_formosa
ENSSDUG00000002417	-	94	48.413	ENSPFOG00000015455	-	85	48.413	Poecilia_formosa
ENSSDUG00000002417	-	98	47.761	ENSPFOG00000003841	-	91	47.388	Poecilia_formosa
ENSSDUG00000002417	-	97	55.094	ENSPFOG00000015382	-	92	54.717	Poecilia_formosa
ENSSDUG00000002417	-	96	48.047	ENSPLAG00000018274	-	92	47.656	Poecilia_latipinna
ENSSDUG00000002417	-	94	48.413	ENSPMEG00000018626	-	90	48.413	Poecilia_mexicana
ENSSDUG00000002417	-	98	54.478	ENSPMEG00000018635	-	93	54.104	Poecilia_mexicana
ENSSDUG00000002417	-	99	44.751	ENSPREG00000005137	-	92	44.898	Poecilia_reticulata
ENSSDUG00000002417	-	97	50.769	ENSPNYG00000005478	-	92	50.769	Pundamilia_nyererei
ENSSDUG00000002417	-	95	59.302	ENSPNYG00000001584	-	91	58.527	Pundamilia_nyererei
ENSSDUG00000002417	-	98	49.430	ENSPNYG00000024019	-	90	49.810	Pundamilia_nyererei
ENSSDUG00000002417	-	98	34.420	ENSPNAG00000006327	-	68	34.058	Pygocentrus_nattereri
ENSSDUG00000002417	-	99	37.548	ENSPNAG00000009266	-	98	37.548	Pygocentrus_nattereri
ENSSDUG00000002417	-	100	89.057	ENSSLDG00000008952	-	95	89.057	Seriola_lalandi_dorsalis
ENSSDUG00000002417	-	99	47.584	ENSSLDG00000016397	-	99	47.955	Seriola_lalandi_dorsalis
ENSSDUG00000002417	-	98	51.698	ENSSPAG00000012856	-	94	51.321	Stegastes_partitus
ENSSDUG00000002417	-	96	50.575	ENSSPAG00000012915	-	98	50.192	Stegastes_partitus
ENSSDUG00000002417	-	72	45.960	ENSXCOG00000008517	-	61	45.960	Xiphophorus_couchianus
ENSSDUG00000002417	-	83	50.442	ENSXCOG00000019639	-	77	53.000	Xiphophorus_couchianus
ENSSDUG00000002417	-	62	43.636	ENSXCOG00000003913	-	87	43.636	Xiphophorus_couchianus
ENSSDUG00000002417	-	98	53.184	ENSXMAG00000009973	-	94	52.273	Xiphophorus_maculatus
ENSSDUG00000002417	-	97	52.471	ENSXMAG00000009971	-	69	52.091	Xiphophorus_maculatus
ENSSDUG00000002417	-	99	47.970	ENSXMAG00000029117	-	95	47.601	Xiphophorus_maculatus