EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002431 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 6416 bases
Position: chrBDQW01000331.1:5905604-5912019
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003208	RRM_1	PF00076.22	5.9e-35	1	2
ENSSDUP00000003208	RRM_1	PF00076.22	5.9e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003280	-	633	-	ENSSDUP00000003208	210 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002431's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002431's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002431	-	80	38.636	ENSSDUG00000009050	-	54	38.636
ENSSDUG00000002431	-	88	56.216	ENSSDUG00000013908	hnrnpa1a	81	58.960
ENSSDUG00000002431	-	71	38.333	ENSSDUG00000022650	-	52	30.337
ENSSDUG00000002431	-	87	59.341	ENSSDUG00000000381	hnrnpa3	60	59.341
ENSSDUG00000002431	-	87	74.691	ENSSDUG00000002394	-	86	74.691
ENSSDUG00000002431	-	85	35.393	ENSSDUG00000014507	msi2a	81	34.615
ENSSDUG00000002431	-	76	34.783	ENSSDUG00000000045	elavl4	54	34.783
ENSSDUG00000002431	-	84	36.723	ENSSDUG00000022697	-	50	36.723
ENSSDUG00000002431	-	80	34.848	ENSSDUG00000021968	-	86	34.848
ENSSDUG00000002431	-	91	38.889	ENSSDUG00000010792	hnrnpd	67	38.889
ENSSDUG00000002431	-	86	31.633	ENSSDUG00000006852	tardbpl	62	31.633

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002431	-	81	60.234	ENSAPOG00000019369	-	53	60.234	Acanthochromis_polyacanthus
ENSSDUG00000002431	-	87	76.879	ENSACIG00000021815	-	85	76.879	Amphilophus_citrinellus
ENSSDUG00000002431	-	81	60.234	ENSAOCG00000005289	-	53	60.234	Amphiprion_ocellaris
ENSSDUG00000002431	-	81	60.234	ENSAPEG00000004179	-	53	60.234	Amphiprion_percula
ENSSDUG00000002431	-	83	94.410	ENSATEG00000003423	-	76	94.410	Anabas_testudineus
ENSSDUG00000002431	-	82	58.382	ENSATEG00000022918	hnrnpa1a	85	58.382	Anabas_testudineus
ENSSDUG00000002431	-	83	70.115	ENSACAG00000017109	-	53	70.760	Anolis_carolinensis
ENSSDUG00000002431	-	82	60.116	ENSACLG00000006940	-	53	60.819	Astatotilapia_calliptera
ENSSDUG00000002431	-	82	79.191	ENSAMXG00000037730	-	53	79.191	Astyanax_mexicanus
ENSSDUG00000002431	-	85	58.659	ENSCSEG00000007589	hnrnpa1a	68	58.659	Cynoglossus_semilaevis
ENSSDUG00000002431	-	96	75.622	ENSCSEG00000014051	-	81	75.622	Cynoglossus_semilaevis
ENSSDUG00000002431	-	81	60.819	ENSCVAG00000012637	hnrnpa1a	52	60.819	Cyprinodon_variegatus
ENSSDUG00000002431	-	90	54.688	ENSELUG00000007372	-	55	54.974	Esox_lucius
ENSSDUG00000002431	-	82	78.613	ENSGMOG00000020353	-	92	78.613	Gadus_morhua
ENSSDUG00000002431	-	90	73.410	ENSGAFG00000016803	-	52	73.410	Gambusia_affinis
ENSSDUG00000002431	-	81	60.819	ENSGAFG00000007751	-	52	60.819	Gambusia_affinis
ENSSDUG00000002431	-	81	60.819	ENSHBUG00000005647	hnrnpa1a	53	60.819	Haplochromis_burtoni
ENSSDUG00000002431	-	92	55.670	ENSIPUG00000022440	-	76	55.191	Ictalurus_punctatus
ENSSDUG00000002431	-	82	58.382	ENSIPUG00000002023	hnrnpa1a	75	56.667	Ictalurus_punctatus
ENSSDUG00000002431	-	95	65.639	ENSIPUG00000001991	-	97	66.079	Ictalurus_punctatus
ENSSDUG00000002431	-	81	60.819	ENSKMAG00000020859	-	53	60.819	Kryptolebias_marmoratus
ENSSDUG00000002431	-	82	58.960	ENSLBEG00000010010	hnrnpa1a	51	58.960	Labrus_bergylta
ENSSDUG00000002431	-	82	52.571	ENSMFAG00000028351	-	53	52.571	Macaca_fascicularis
ENSSDUG00000002431	-	82	58.960	ENSMAMG00000007606	-	52	59.649	Mastacembelus_armatus
ENSSDUG00000002431	-	81	60.819	ENSMZEG00005027173	hnrnpa1a	53	60.819	Maylandia_zebra
ENSSDUG00000002431	-	82	58.382	ENSMMOG00000008251	hnrnpa1a	74	58.382	Mola_mola
ENSSDUG00000002431	-	90	75.723	ENSMALG00000008886	-	86	74.576	Monopterus_albus
ENSSDUG00000002431	-	82	58.382	ENSMALG00000014091	hnrnpa1a	52	59.064	Monopterus_albus
ENSSDUG00000002431	-	82	95.954	ENSNBRG00000014469	-	80	95.954	Neolamprologus_brichardi
ENSSDUG00000002431	-	82	60.116	ENSNBRG00000018441	-	54	60.116	Neolamprologus_brichardi
ENSSDUG00000002431	-	88	68.519	ENSORLG00000029240	-	96	68.519	Oryzias_latipes
ENSSDUG00000002431	-	82	60.116	ENSORLG00000008001	-	54	60.819	Oryzias_latipes
ENSSDUG00000002431	-	82	60.116	ENSORLG00020006582	hnrnpa1a	81	60.116	Oryzias_latipes_hni
ENSSDUG00000002431	-	87	72.131	ENSORLG00020006043	-	63	72.131	Oryzias_latipes_hni
ENSSDUG00000002431	-	94	68.478	ENSORLG00020022498	-	95	68.478	Oryzias_latipes_hni
ENSSDUG00000002431	-	82	60.116	ENSORLG00015022294	-	54	60.819	Oryzias_latipes_hsok
ENSSDUG00000002431	-	82	60.116	ENSOMEG00000015959	-	54	60.819	Oryzias_melastigma
ENSSDUG00000002431	-	82	61.272	ENSPMGG00000011804	hnrnpa1a	74	61.272	Periophthalmus_magnuspinnatus
ENSSDUG00000002431	-	83	86.857	ENSPMGG00000016392	-	94	86.857	Periophthalmus_magnuspinnatus
ENSSDUG00000002431	-	81	60.819	ENSPFOG00000001825	-	52	60.819	Poecilia_formosa
ENSSDUG00000002431	-	81	60.819	ENSPMEG00000002425	-	52	60.819	Poecilia_mexicana
ENSSDUG00000002431	-	82	95.954	ENSPNYG00000020729	-	88	95.954	Pundamilia_nyererei
ENSSDUG00000002431	-	89	59.538	ENSPNAG00000021630	-	56	59.538	Pygocentrus_nattereri
ENSSDUG00000002431	-	87	58.791	ENSPNAG00000007752	hnrnpa1a	82	54.774	Pygocentrus_nattereri
ENSSDUG00000002431	-	83	58.286	ENSSMAG00000004641	hnrnpa1a	58	59.649	Scophthalmus_maximus
ENSSDUG00000002431	-	87	71.676	ENSSMAG00000010246	-	79	70.621	Scophthalmus_maximus
ENSSDUG00000002431	-	84	86.932	ENSSMAG00000010279	-	99	86.932	Scophthalmus_maximus
ENSSDUG00000002431	-	88	56.216	ENSSLDG00000003718	hnrnpa1a	81	56.216	Seriola_lalandi_dorsalis
ENSSDUG00000002431	-	82	59.538	ENSSPAG00000018518	-	54	59.538	Stegastes_partitus
ENSSDUG00000002431	-	82	57.803	ENSTRUG00000020491	-	55	57.803	Takifugu_rubripes
ENSSDUG00000002431	-	84	87.571	ENSTNIG00000007398	-	66	89.017	Tetraodon_nigroviridis
ENSSDUG00000002431	-	82	59.538	ENSXCOG00000009001	-	77	59.538	Xiphophorus_couchianus
ENSSDUG00000002431	-	81	60.234	ENSXMAG00000008076	-	52	60.234	Xiphophorus_maculatus