EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002460 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4890 bases
Position: chrBDQW01000111.1:435238-440127
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003231	RVT_1	PF00078.27	6.1e-26	1	1
ENSSDUP00000003231	zf-CCHC	PF00098.23	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003305	-	4890	-	ENSSDUP00000003231	1243 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002460	-	64	39.171	ENSSDUG00000010009	-	80	39.171
ENSSDUG00000002460	-	52	36.453	ENSSDUG00000012982	-	53	36.453

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002460	-	76	56.448	ENSAPOG00000008045	-	98	56.448	Acanthochromis_polyacanthus
ENSSDUG00000002460	-	91	51.222	ENSAPOG00000012135	-	98	51.222	Acanthochromis_polyacanthus
ENSSDUG00000002460	-	52	65.138	ENSAPOG00000013711	-	79	65.138	Acanthochromis_polyacanthus
ENSSDUG00000002460	-	52	65.138	ENSAPOG00000013817	-	86	65.138	Acanthochromis_polyacanthus
ENSSDUG00000002460	-	99	68.489	ENSACLG00000026879	-	83	68.489	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	43.499	ENSACLG00000014619	-	82	43.499	Astatotilapia_calliptera
ENSSDUG00000002460	-	95	37.874	ENSACLG00000018060	-	79	37.874	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	50.756	ENSACLG00000017161	-	81	50.756	Astatotilapia_calliptera
ENSSDUG00000002460	-	73	38.413	ENSACLG00000013572	-	59	38.413	Astatotilapia_calliptera
ENSSDUG00000002460	-	58	49.462	ENSACLG00000004062	-	99	49.462	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	34.049	ENSACLG00000014870	-	80	34.049	Astatotilapia_calliptera
ENSSDUG00000002460	-	57	38.679	ENSACLG00000015735	-	84	37.666	Astatotilapia_calliptera
ENSSDUG00000002460	-	82	39.831	ENSACLG00000010042	-	80	39.831	Astatotilapia_calliptera
ENSSDUG00000002460	-	64	57.125	ENSACLG00000007343	-	97	57.125	Astatotilapia_calliptera
ENSSDUG00000002460	-	86	45.064	ENSACLG00000027730	-	92	44.941	Astatotilapia_calliptera
ENSSDUG00000002460	-	73	38.782	ENSACLG00000018181	-	98	38.782	Astatotilapia_calliptera
ENSSDUG00000002460	-	81	47.093	ENSACLG00000001563	-	100	47.093	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	49.960	ENSACLG00000009628	-	82	49.960	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	49.801	ENSACLG00000024091	-	82	49.801	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	34.026	ENSACLG00000002180	-	83	34.096	Astatotilapia_calliptera
ENSSDUG00000002460	-	59	52.830	ENSACLG00000008862	-	100	52.830	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	34.049	ENSACLG00000017808	-	80	34.049	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	34.049	ENSACLG00000000499	-	80	34.049	Astatotilapia_calliptera
ENSSDUG00000002460	-	72	43.771	ENSACLG00000000367	-	94	43.771	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	49.960	ENSACLG00000025719	-	82	49.960	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	43.475	ENSACLG00000019876	-	82	43.475	Astatotilapia_calliptera
ENSSDUG00000002460	-	99	34.240	ENSACLG00000027291	-	75	35.550	Astatotilapia_calliptera
ENSSDUG00000002460	-	50	40.113	ENSAMXG00000037673	-	78	40.113	Astyanax_mexicanus
ENSSDUG00000002460	-	99	32.855	ENSAMXG00000040892	-	56	39.459	Astyanax_mexicanus
ENSSDUG00000002460	-	99	40.556	ENSAMXG00000038169	-	83	44.066	Astyanax_mexicanus
ENSSDUG00000002460	-	60	32.759	ENSAMXG00000041112	-	65	32.759	Astyanax_mexicanus
ENSSDUG00000002460	-	58	39.195	ENSAMXG00000043892	-	93	39.329	Astyanax_mexicanus
ENSSDUG00000002460	-	90	32.842	ENSAMXG00000030902	-	75	33.892	Astyanax_mexicanus
ENSSDUG00000002460	-	99	39.824	ENSAMXG00000030987	-	73	42.043	Astyanax_mexicanus
ENSSDUG00000002460	-	99	33.693	ENSAMXG00000038578	-	93	33.719	Astyanax_mexicanus
ENSSDUG00000002460	-	99	33.898	ENSAMXG00000031698	-	69	36.106	Astyanax_mexicanus
ENSSDUG00000002460	-	65	40.554	ENSCPBG00000011626	-	99	40.554	Chrysemys_picta_bellii
ENSSDUG00000002460	-	63	39.072	ENSCVAG00000009912	-	99	39.194	Cyprinodon_variegatus
ENSSDUG00000002460	-	88	35.013	ENSELUG00000000948	-	95	35.013	Esox_lucius
ENSSDUG00000002460	-	71	43.400	ENSFHEG00000000971	-	77	43.400	Fundulus_heteroclitus
ENSSDUG00000002460	-	60	57.412	ENSGAFG00000009062	-	98	57.412	Gambusia_affinis
ENSSDUG00000002460	-	79	39.664	ENSGAGG00000025282	-	99	32.560	Gopherus_agassizii
ENSSDUG00000002460	-	65	43.101	ENSGAGG00000020521	-	99	43.101	Gopherus_agassizii
ENSSDUG00000002460	-	93	41.112	ENSGAGG00000022240	-	74	41.112	Gopherus_agassizii
ENSSDUG00000002460	-	50	37.845	ENSGAGG00000002373	-	67	37.845	Gopherus_agassizii
ENSSDUG00000002460	-	65	43.101	ENSGAGG00000012039	-	99	43.101	Gopherus_agassizii
ENSSDUG00000002460	-	79	42.629	ENSGAGG00000014450	-	88	42.629	Gopherus_agassizii
ENSSDUG00000002460	-	68	46.801	ENSIPUG00000000601	-	93	46.801	Ictalurus_punctatus
ENSSDUG00000002460	-	84	34.633	ENSMAMG00000018393	-	99	34.633	Mastacembelus_armatus
ENSSDUG00000002460	-	69	40.452	ENSMZEG00005000633	-	82	40.452	Maylandia_zebra
ENSSDUG00000002460	-	53	54.423	ENSMALG00000019305	-	100	54.423	Monopterus_albus
ENSSDUG00000002460	-	100	49.042	ENSORLG00000026546	-	82	49.042	Oryzias_latipes
ENSSDUG00000002460	-	100	49.084	ENSORLG00000026665	-	82	49.084	Oryzias_latipes
ENSSDUG00000002460	-	99	49.365	ENSORLG00000024220	-	81	49.365	Oryzias_latipes
ENSSDUG00000002460	-	91	35.661	ENSORLG00000029675	-	74	35.524	Oryzias_latipes
ENSSDUG00000002460	-	99	49.405	ENSORLG00000030265	-	81	49.405	Oryzias_latipes
ENSSDUG00000002460	-	99	33.793	ENSORLG00000026873	-	75	34.909	Oryzias_latipes
ENSSDUG00000002460	-	57	53.371	ENSORLG00000029791	-	99	53.371	Oryzias_latipes
ENSSDUG00000002460	-	92	48.190	ENSORLG00000022369	-	80	47.845	Oryzias_latipes
ENSSDUG00000002460	-	99	49.126	ENSORLG00000030542	-	82	48.808	Oryzias_latipes
ENSSDUG00000002460	-	99	49.206	ENSORLG00000028795	-	82	48.889	Oryzias_latipes
ENSSDUG00000002460	-	99	33.666	ENSORLG00000026629	-	75	34.772	Oryzias_latipes
ENSSDUG00000002460	-	60	57.447	ENSORLG00000025478	-	97	57.447	Oryzias_latipes
ENSSDUG00000002460	-	99	49.101	ENSORLG00000027831	-	84	49.101	Oryzias_latipes
ENSSDUG00000002460	-	99	34.332	ENSORLG00000029874	-	74	35.661	Oryzias_latipes
ENSSDUG00000002460	-	99	33.666	ENSORLG00000023181	-	75	34.772	Oryzias_latipes
ENSSDUG00000002460	-	99	49.485	ENSORLG00000025739	-	81	49.485	Oryzias_latipes
ENSSDUG00000002460	-	73	39.035	ENSORLG00000026676	-	97	39.035	Oryzias_latipes
ENSSDUG00000002460	-	100	49.400	ENSORLG00000024233	-	82	49.400	Oryzias_latipes
ENSSDUG00000002460	-	71	39.586	ENSORLG00000028632	-	86	39.695	Oryzias_latipes
ENSSDUG00000002460	-	99	49.126	ENSORLG00000028609	-	82	48.808	Oryzias_latipes
ENSSDUG00000002460	-	99	48.958	ENSORLG00000024904	-	83	48.958	Oryzias_latipes
ENSSDUG00000002460	-	99	49.405	ENSORLG00000027568	-	81	49.405	Oryzias_latipes
ENSSDUG00000002460	-	98	48.743	ENSORLG00020020268	-	82	48.743	Oryzias_latipes_hni
ENSSDUG00000002460	-	51	54.631	ENSORLG00020002554	-	99	54.631	Oryzias_latipes_hni
ENSSDUG00000002460	-	99	49.076	ENSORLG00020001422	-	81	49.076	Oryzias_latipes_hni
ENSSDUG00000002460	-	99	49.326	ENSORLG00020008293	-	81	49.326	Oryzias_latipes_hni
ENSSDUG00000002460	-	99	48.638	ENSORLG00020014203	-	81	48.638	Oryzias_latipes_hni
ENSSDUG00000002460	-	99	48.798	ENSORLG00020003869	-	81	48.798	Oryzias_latipes_hni
ENSSDUG00000002460	-	99	49.286	ENSORLG00015018878	-	82	48.968	Oryzias_latipes_hsok
ENSSDUG00000002460	-	99	49.365	ENSORLG00015017778	-	82	49.048	Oryzias_latipes_hsok
ENSSDUG00000002460	-	99	34.229	ENSOMEG00000009987	-	77	35.265	Oryzias_melastigma
ENSSDUG00000002460	-	53	38.865	ENSOMEG00000006705	-	93	38.865	Oryzias_melastigma
ENSSDUG00000002460	-	99	49.722	ENSOMEG00000003712	-	82	49.761	Oryzias_melastigma
ENSSDUG00000002460	-	53	41.728	ENSPKIG00000000391	-	99	41.728	Paramormyrops_kingsleyae
ENSSDUG00000002460	-	66	51.609	ENSPSIG00000001658	-	94	51.609	Pelodiscus_sinensis
ENSSDUG00000002460	-	100	42.457	ENSPSIG00000000767	-	90	42.457	Pelodiscus_sinensis
ENSSDUG00000002460	-	87	46.432	ENSPSIG00000000353	-	90	46.432	Pelodiscus_sinensis
ENSSDUG00000002460	-	91	50.774	ENSPSIG00000000994	-	83	50.774	Pelodiscus_sinensis
ENSSDUG00000002460	-	61	50.661	ENSPSIG00000013781	-	100	50.661	Pelodiscus_sinensis
ENSSDUG00000002460	-	99	42.445	ENSPSIG00000000489	-	84	42.523	Pelodiscus_sinensis
ENSSDUG00000002460	-	96	49.110	ENSPMEG00000016355	-	99	49.110	Poecilia_mexicana
ENSSDUG00000002460	-	63	75.796	ENSPMEG00000019585	-	100	75.796	Poecilia_mexicana
ENSSDUG00000002460	-	99	32.702	ENSPREG00000004954	-	83	33.079	Poecilia_reticulata
ENSSDUG00000002460	-	99	33.635	ENSPREG00000000390	-	82	33.635	Poecilia_reticulata
ENSSDUG00000002460	-	57	99.291	ENSSLDG00000004385	-	74	99.291	Seriola_lalandi_dorsalis
ENSSDUG00000002460	-	91	35.091	ENSXMAG00000023319	-	75	35.091	Xiphophorus_maculatus
ENSSDUG00000002460	-	99	34.609	ENSXMAG00000021213	-	83	34.353	Xiphophorus_maculatus
ENSSDUG00000002460	-	91	34.388	ENSXMAG00000021298	-	75	34.388	Xiphophorus_maculatus
ENSSDUG00000002460	-	99	33.512	ENSXMAG00000023079	-	82	33.206	Xiphophorus_maculatus
ENSSDUG00000002460	-	73	38.996	ENSXMAG00000030089	-	88	39.316	Xiphophorus_maculatus
ENSSDUG00000002460	-	99	34.736	ENSXMAG00000026594	-	83	34.480	Xiphophorus_maculatus
ENSSDUG00000002460	-	99	33.512	ENSXMAG00000023503	-	82	33.206	Xiphophorus_maculatus
ENSSDUG00000002460	-	93	48.665	ENSXMAG00000030100	-	82	48.625	Xiphophorus_maculatus
ENSSDUG00000002460	-	99	49.799	ENSXMAG00000026031	-	82	49.760	Xiphophorus_maculatus