EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002625 (Gene tree)
Gene ID: 111230801
Gene Symbol: -
Alias: -
Full Name: intracellular hyaluronan-binding protein 4-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 3783 bases
Position: chrBDQW01000290.1:4059652-4063434
Accession: 111230801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003439	HABP4_PAI-RBP1	PF04774.15	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003516	-	1395	XM_022757629	ENSSDUP00000003439	378 (aa)	XP_022613350	UPI000BBF20DE

Gene Model

Click here to download ENSSDUG00000002625's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002625's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002625	-	92	33.850	ENSSDUG00000002481	serbp1a	90	37.432
ENSSDUG00000002625	-	87	35.135	ENSSDUG00000008857	serbp1b	99	36.804

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002625	-	100	73.351	ENSAPOG00000018926	-	100	71.768	Acanthochromis_polyacanthus
ENSSDUG00000002625	-	100	75.591	ENSAOCG00000011621	-	100	76.115	Amphiprion_ocellaris
ENSSDUG00000002625	-	100	75.726	ENSAPEG00000006355	-	100	76.253	Amphiprion_percula
ENSSDUG00000002625	-	99	43.501	ENSAMXG00000000297	-	96	42.895	Astyanax_mexicanus
ENSSDUG00000002625	-	100	67.098	ENSCSEG00000017753	-	100	65.803	Cynoglossus_semilaevis
ENSSDUG00000002625	-	97	54.545	ENSGAFG00000012163	-	98	55.065	Gambusia_affinis
ENSSDUG00000002625	-	100	74.142	ENSMAMG00000020735	-	98	72.823	Mastacembelus_armatus
ENSSDUG00000002625	-	55	43.304	ENSMODG00000000514	-	51	43.304	Monodelphis_domestica
ENSSDUG00000002625	-	99	45.745	ENSPMGG00000017136	-	99	45.600	Periophthalmus_magnuspinnatus
ENSSDUG00000002625	-	100	75.718	ENSSMAG00000003212	-	100	77.546	Scophthalmus_maximus
ENSSDUG00000002625	-	70	100.000	ENSSLDG00000019167	-	100	100.000	Seriola_lalandi_dorsalis
ENSSDUG00000002625	-	100	74.413	ENSSPAG00000009182	-	100	74.935	Stegastes_partitus
ENSSDUG00000002625	-	100	65.699	ENSTRUG00000015277	IHABP	100	65.172	Takifugu_rubripes
ENSSDUG00000002625	-	99	36.296	ENSTTRG00000005786	-	50	41.395	Tursiops_truncatus