EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002689 (Gene tree)
Gene ID: 111236642
Gene Symbol: si:ch211-217k17.7
Alias: im:7155625
Full Name: coiled-coil domain containing 86
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 2305 bases
Position: chrBDQW01000686.1:1169168-1171472
Accession: 111236642
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003529	Cgr1	PF03879.14	1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003608	-	801	XM_022765458	ENSSDUP00000003529	266 (aa)	XP_022621179	-

Gene Model

Click here to download ENSSDUG00000002689's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002689's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002689	si:ch211-217k17.7	95	65.169	ENSAPOG00000010968	si:ch211-217k17.7	90	64.419	Acanthochromis_polyacanthus
ENSSDUG00000002689	si:ch211-217k17.7	100	58.361	ENSACIG00000020679	si:ch211-217k17.7	88	57.705	Amphilophus_citrinellus
ENSSDUG00000002689	si:ch211-217k17.7	95	66.165	ENSAOCG00000006303	si:ch211-217k17.7	90	64.286	Amphiprion_ocellaris
ENSSDUG00000002689	si:ch211-217k17.7	95	65.038	ENSAPEG00000015364	si:ch211-217k17.7	90	63.158	Amphiprion_percula
ENSSDUG00000002689	si:ch211-217k17.7	95	74.609	ENSATEG00000016386	si:ch211-217k17.7	89	74.219	Anabas_testudineus
ENSSDUG00000002689	si:ch211-217k17.7	100	60.544	ENSCSEG00000002637	si:ch211-217k17.7	100	60.345	Cynoglossus_semilaevis
ENSSDUG00000002689	si:ch211-217k17.7	84	60.816	ENSCVAG00000003135	si:ch211-217k17.7	82	58.750	Cyprinodon_variegatus
ENSSDUG00000002689	si:ch211-217k17.7	84	52.282	ENSDARG00000059908	si:ch211-217k17.7	82	50.216	Danio_rerio
ENSSDUG00000002689	si:ch211-217k17.7	87	51.493	ENSELUG00000022687	si:ch211-217k17.7	81	52.157	Esox_lucius
ENSSDUG00000002689	si:ch211-217k17.7	92	48.450	ENSGMOG00000016242	-	90	47.656	Gadus_morhua
ENSSDUG00000002689	si:ch211-217k17.7	94	60.300	ENSGAFG00000005681	si:ch211-217k17.7	89	60.300	Gambusia_affinis
ENSSDUG00000002689	si:ch211-217k17.7	82	66.063	ENSGACG00000017630	si:ch211-217k17.7	93	66.210	Gasterosteus_aculeatus
ENSSDUG00000002689	si:ch211-217k17.7	91	59.286	ENSHBUG00000010352	si:ch211-217k17.7	100	58.746	Haplochromis_burtoni
ENSSDUG00000002689	si:ch211-217k17.7	50	53.383	ENSHGLG00100010685	CCDC86	52	53.383	Heterocephalus_glaber_male
ENSSDUG00000002689	si:ch211-217k17.7	95	63.396	ENSKMAG00000000919	si:ch211-217k17.7	89	63.019	Kryptolebias_marmoratus
ENSSDUG00000002689	si:ch211-217k17.7	95	62.891	ENSLBEG00000020547	-	86	62.500	Labrus_bergylta
ENSSDUG00000002689	si:ch211-217k17.7	95	68.864	ENSMAMG00000016395	si:ch211-217k17.7	91	68.498	Mastacembelus_armatus
ENSSDUG00000002689	si:ch211-217k17.7	100	57.756	ENSMZEG00005019822	si:ch211-217k17.7	100	59.406	Maylandia_zebra
ENSSDUG00000002689	si:ch211-217k17.7	100	65.052	ENSMMOG00000006446	si:ch211-217k17.7	100	64.360	Mola_mola
ENSSDUG00000002689	si:ch211-217k17.7	100	57.394	ENSNBRG00000013330	-	100	58.596	Neolamprologus_brichardi
ENSSDUG00000002689	si:ch211-217k17.7	100	61.092	ENSONIG00000017568	si:ch211-217k17.7	100	60.751	Oreochromis_niloticus
ENSSDUG00000002689	si:ch211-217k17.7	95	60.985	ENSORLG00000006331	-	93	61.742	Oryzias_latipes
ENSSDUG00000002689	si:ch211-217k17.7	95	60.526	ENSORLG00020021345	si:ch211-217k17.7	93	61.654	Oryzias_latipes_hni
ENSSDUG00000002689	si:ch211-217k17.7	95	61.450	ENSORLG00015021538	si:ch211-217k17.7	93	61.069	Oryzias_latipes_hsok
ENSSDUG00000002689	si:ch211-217k17.7	79	58.442	ENSOMEG00000007064	si:ch211-217k17.7	83	59.740	Oryzias_melastigma
ENSSDUG00000002689	si:ch211-217k17.7	78	63.134	ENSPMGG00000023665	si:ch211-217k17.7	83	62.931	Periophthalmus_magnuspinnatus
ENSSDUG00000002689	si:ch211-217k17.7	94	58.242	ENSPFOG00000011617	si:ch211-217k17.7	91	59.341	Poecilia_formosa
ENSSDUG00000002689	si:ch211-217k17.7	94	57.875	ENSPLAG00000016122	si:ch211-217k17.7	90	58.974	Poecilia_latipinna
ENSSDUG00000002689	si:ch211-217k17.7	94	58.242	ENSPMEG00000018535	si:ch211-217k17.7	89	58.974	Poecilia_mexicana
ENSSDUG00000002689	si:ch211-217k17.7	89	59.073	ENSPREG00000005478	si:ch211-217k17.7	86	59.846	Poecilia_reticulata
ENSSDUG00000002689	si:ch211-217k17.7	100	67.466	ENSSMAG00000007686	si:ch211-217k17.7	100	67.123	Scophthalmus_maximus
ENSSDUG00000002689	si:ch211-217k17.7	100	89.931	ENSSLDG00000016681	si:ch211-217k17.7	100	89.931	Seriola_lalandi_dorsalis
ENSSDUG00000002689	si:ch211-217k17.7	100	61.616	ENSSPAG00000000367	si:ch211-217k17.7	100	60.678	Stegastes_partitus
ENSSDUG00000002689	si:ch211-217k17.7	95	58.824	ENSTRUG00000024101	si:ch211-217k17.7	91	58.431	Takifugu_rubripes
ENSSDUG00000002689	si:ch211-217k17.7	94	58.909	ENSXCOG00000011207	si:ch211-217k17.7	86	61.660	Xiphophorus_couchianus
ENSSDUG00000002689	si:ch211-217k17.7	94	62.547	ENSXMAG00000005529	si:ch211-217k17.7	99	59.289	Xiphophorus_maculatus