EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000002832 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 5555 bases
Position: chrBDQW01000331.1:6398667-6404221
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003739	RnaseA	PF00074.20	2.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000003822	-	369	-	ENSSDUP00000003739	122 (aa)	-	-

Gene Model

Click here to download ENSSDUG00000002832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000002832	-	94	45.690	ENSSDUG00000002822	-	76	45.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002832	-	91	67.568	ENSACIG00000021992	-	86	67.568	Amphilophus_citrinellus
ENSSDUG00000002832	-	92	40.171	ENSACIG00000000515	-	74	40.171	Amphilophus_citrinellus
ENSSDUG00000002832	-	90	43.363	ENSACIG00000005830	-	74	43.363	Amphilophus_citrinellus
ENSSDUG00000002832	-	91	65.766	ENSATEG00000003020	-	84	65.766	Anabas_testudineus
ENSSDUG00000002832	-	93	52.174	ENSATEG00000003017	-	78	52.174	Anabas_testudineus
ENSSDUG00000002832	-	93	37.931	ENSACAG00000005623	-	75	37.931	Anolis_carolinensis
ENSSDUG00000002832	-	91	35.965	ENSACAG00000007898	-	76	35.965	Anolis_carolinensis
ENSSDUG00000002832	-	89	31.250	ENSACAG00000021050	-	77	31.250	Anolis_carolinensis
ENSSDUG00000002832	-	89	33.913	ENSACAG00000025388	-	76	33.913	Anolis_carolinensis
ENSSDUG00000002832	-	93	38.462	ENSACAG00000005620	-	75	38.462	Anolis_carolinensis
ENSSDUG00000002832	-	93	38.462	ENSACAG00000005615	-	78	38.462	Anolis_carolinensis
ENSSDUG00000002832	-	90	44.248	ENSACLG00000015252	-	68	44.248	Astatotilapia_calliptera
ENSSDUG00000002832	-	91	66.667	ENSACLG00000008780	-	86	66.667	Astatotilapia_calliptera
ENSSDUG00000002832	-	90	41.593	ENSACLG00000011381	-	65	41.593	Astatotilapia_calliptera
ENSSDUG00000002832	-	90	45.045	ENSACLG00000019232	-	63	45.045	Astatotilapia_calliptera
ENSSDUG00000002832	-	91	43.860	ENSACLG00000009967	-	69	43.860	Astatotilapia_calliptera
ENSSDUG00000002832	-	90	44.737	ENSACLG00000027154	-	62	44.737	Astatotilapia_calliptera
ENSSDUG00000002832	-	90	45.133	ENSACLG00000011398	-	66	45.133	Astatotilapia_calliptera
ENSSDUG00000002832	-	94	44.828	ENSAMXG00000043058	rnasel3	74	44.828	Astyanax_mexicanus
ENSSDUG00000002832	-	90	31.624	ENSCJAG00000045336	RNASE4	72	31.624	Callithrix_jacchus
ENSSDUG00000002832	-	84	30.556	ENSCHIG00000010582	RNASE4	64	30.556	Capra_hircus
ENSSDUG00000002832	-	93	35.294	ENSCPBG00000009535	-	89	35.294	Chrysemys_picta_bellii
ENSSDUG00000002832	-	93	35.294	ENSCPBG00000009545	-	87	35.294	Chrysemys_picta_bellii
ENSSDUG00000002832	-	92	31.356	ENSCPBG00000009542	-	59	31.356	Chrysemys_picta_bellii
ENSSDUG00000002832	-	89	35.455	ENSCPBG00000018786	-	93	35.455	Chrysemys_picta_bellii
ENSSDUG00000002832	-	92	37.069	ENSCPBG00000009433	-	75	37.069	Chrysemys_picta_bellii
ENSSDUG00000002832	-	91	32.479	ENSCPBG00000018790	-	79	32.479	Chrysemys_picta_bellii
ENSSDUG00000002832	-	86	60.909	ENSCVAG00000007107	-	93	60.909	Cyprinodon_variegatus
ENSSDUG00000002832	-	90	45.536	ENSDARG00000043196	rnasel2	74	45.536	Danio_rerio
ENSSDUG00000002832	-	94	36.134	ENSDARG00000036171	rnasel3	79	36.134	Danio_rerio
ENSSDUG00000002832	-	94	39.831	ENSELUG00000001648	-	76	39.831	Esox_lucius
ENSSDUG00000002832	-	94	41.525	ENSELUG00000010261	-	76	41.525	Esox_lucius
ENSSDUG00000002832	-	94	40.678	ENSFHEG00000003359	-	83	40.678	Fundulus_heteroclitus
ENSSDUG00000002832	-	94	37.288	ENSFHEG00000018269	-	72	38.983	Fundulus_heteroclitus
ENSSDUG00000002832	-	93	43.966	ENSFHEG00000012707	-	90	43.966	Fundulus_heteroclitus
ENSSDUG00000002832	-	96	64.957	ENSFHEG00000010963	-	93	64.957	Fundulus_heteroclitus
ENSSDUG00000002832	-	94	40.678	ENSGAFG00000003097	-	72	40.678	Gambusia_affinis
ENSSDUG00000002832	-	91	75.676	ENSGAFG00000016457	-	87	75.676	Gambusia_affinis
ENSSDUG00000002832	-	89	33.043	ENSGAGG00000006589	-	80	33.043	Gopherus_agassizii
ENSSDUG00000002832	-	90	34.821	ENSGAGG00000000779	-	90	34.821	Gopherus_agassizii
ENSSDUG00000002832	-	66	40.741	ENSGAGG00000019736	-	68	40.741	Gopherus_agassizii
ENSSDUG00000002832	-	97	37.600	ENSGAGG00000009295	-	98	37.600	Gopherus_agassizii
ENSSDUG00000002832	-	91	32.479	ENSGAGG00000005649	-	77	32.479	Gopherus_agassizii
ENSSDUG00000002832	-	91	42.105	ENSHBUG00000008120	-	75	42.105	Haplochromis_burtoni
ENSSDUG00000002832	-	95	64.655	ENSHBUG00000023877	-	78	64.655	Haplochromis_burtoni
ENSSDUG00000002832	-	91	41.593	ENSIPUG00000019822	-	76	41.593	Ictalurus_punctatus
ENSSDUG00000002832	-	90	39.640	ENSIPUG00000019837	-	74	39.640	Ictalurus_punctatus
ENSSDUG00000002832	-	90	36.937	ENSIPUG00000019807	-	80	35.965	Ictalurus_punctatus
ENSSDUG00000002832	-	80	67.347	ENSKMAG00000011093	-	93	67.347	Kryptolebias_marmoratus
ENSSDUG00000002832	-	92	61.062	ENSLBEG00000019613	-	72	61.062	Labrus_bergylta
ENSSDUG00000002832	-	95	48.276	ENSLBEG00000008584	-	74	48.276	Labrus_bergylta
ENSSDUG00000002832	-	92	61.062	ENSLBEG00000013451	-	59	61.062	Labrus_bergylta
ENSSDUG00000002832	-	89	41.071	ENSLOCG00000017306	-	73	41.071	Lepisosteus_oculatus
ENSSDUG00000002832	-	84	31.429	ENSLOCG00000017307	-	68	31.429	Lepisosteus_oculatus
ENSSDUG00000002832	-	91	61.261	ENSMAMG00000017967	rnasel2	90	61.261	Mastacembelus_armatus
ENSSDUG00000002832	-	91	67.568	ENSMZEG00005000725	-	91	67.568	Maylandia_zebra
ENSSDUG00000002832	-	90	44.248	ENSMZEG00005022699	-	67	44.248	Maylandia_zebra
ENSSDUG00000002832	-	90	45.133	ENSMZEG00005001740	-	66	45.133	Maylandia_zebra
ENSSDUG00000002832	-	91	44.737	ENSMZEG00005024008	-	66	44.737	Maylandia_zebra
ENSSDUG00000002832	-	88	45.455	ENSMZEG00005013926	-	66	45.455	Maylandia_zebra
ENSSDUG00000002832	-	90	44.737	ENSMZEG00005009720	-	74	44.737	Maylandia_zebra
ENSSDUG00000002832	-	89	44.643	ENSMZEG00005028344	-	85	44.643	Maylandia_zebra
ENSSDUG00000002832	-	89	32.743	ENSMAUG00000007701	Rnase4	70	32.710	Mesocricetus_auratus
ENSSDUG00000002832	-	89	33.333	ENSMOCG00000013274	Rnase4	70	33.333	Microtus_ochrogaster
ENSSDUG00000002832	-	88	71.963	ENSMALG00000008576	-	86	71.963	Monopterus_albus
ENSSDUG00000002832	-	95	46.610	ENSMALG00000016394	-	90	46.610	Monopterus_albus
ENSSDUG00000002832	-	89	30.702	MGP_CAROLIEiJ_G0019217	Rnase4	70	30.556	Mus_caroli
ENSSDUG00000002832	-	89	31.579	MGP_PahariEiJ_G0030241	Rnase4	70	31.481	Mus_pahari
ENSSDUG00000002832	-	84	32.710	ENSNGAG00000015343	Rnase4	70	32.710	Nannospalax_galili
ENSSDUG00000002832	-	97	63.559	ENSNBRG00000014223	-	93	63.559	Neolamprologus_brichardi
ENSSDUG00000002832	-	84	32.407	ENSOPRG00000017093	RNASE4	71	32.407	Ochotona_princeps
ENSSDUG00000002832	-	89	31.250	ENSODEG00000018694	RNASE4	74	31.250	Octodon_degus
ENSSDUG00000002832	-	92	44.737	ENSONIG00000021000	-	70	44.737	Oreochromis_niloticus
ENSSDUG00000002832	-	92	44.737	ENSONIG00000020681	-	70	44.737	Oreochromis_niloticus
ENSSDUG00000002832	-	90	43.750	ENSONIG00000021223	-	72	43.750	Oreochromis_niloticus
ENSSDUG00000002832	-	90	61.818	ENSONIG00000020948	-	76	61.818	Oreochromis_niloticus
ENSSDUG00000002832	-	90	44.248	ENSONIG00000020947	-	70	44.248	Oreochromis_niloticus
ENSSDUG00000002832	-	92	43.860	ENSONIG00000007322	-	75	43.860	Oreochromis_niloticus
ENSSDUG00000002832	-	92	43.860	ENSONIG00000001936	-	75	43.860	Oreochromis_niloticus
ENSSDUG00000002832	-	84	30.556	ENSOCUG00000013022	RNASE4	71	30.556	Oryctolagus_cuniculus
ENSSDUG00000002832	-	94	63.478	ENSORLG00000030644	-	79	63.478	Oryzias_latipes
ENSSDUG00000002832	-	90	60.909	ENSORLG00020006700	-	91	60.909	Oryzias_latipes_hni
ENSSDUG00000002832	-	94	62.609	ENSORLG00015015840	-	78	62.609	Oryzias_latipes_hsok
ENSSDUG00000002832	-	98	42.149	ENSORLG00015011855	-	94	42.149	Oryzias_latipes_hsok
ENSSDUG00000002832	-	95	39.316	ENSOMEG00000007084	-	80	39.316	Oryzias_melastigma
ENSSDUG00000002832	-	92	60.714	ENSOMEG00000012035	-	90	60.714	Oryzias_melastigma
ENSSDUG00000002832	-	89	30.702	ENSOARG00000012938	RNASE4	71	30.556	Ovis_aries
ENSSDUG00000002832	-	91	42.982	ENSPKIG00000000336	-	62	42.982	Paramormyrops_kingsleyae
ENSSDUG00000002832	-	91	38.793	ENSPKIG00000010485	-	77	38.793	Paramormyrops_kingsleyae
ENSSDUG00000002832	-	90	41.593	ENSPKIG00000010470	-	67	41.593	Paramormyrops_kingsleyae
ENSSDUG00000002832	-	94	42.975	ENSPKIG00000000325	-	81	42.975	Paramormyrops_kingsleyae
ENSSDUG00000002832	-	91	32.479	ENSPSIG00000000335	-	80	32.479	Pelodiscus_sinensis
ENSSDUG00000002832	-	96	49.167	ENSPMGG00000005579	-	90	49.167	Periophthalmus_magnuspinnatus
ENSSDUG00000002832	-	97	54.545	ENSPMGG00000005577	-	94	54.545	Periophthalmus_magnuspinnatus
ENSSDUG00000002832	-	93	50.847	ENSPMGG00000008154	-	88	50.847	Periophthalmus_magnuspinnatus
ENSSDUG00000002832	-	96	35.897	ENSPFOG00000024337	-	81	35.897	Poecilia_formosa
ENSSDUG00000002832	-	93	37.931	ENSPFOG00000021872	-	73	37.931	Poecilia_formosa
ENSSDUG00000002832	-	97	73.109	ENSPLAG00000000929	-	93	73.109	Poecilia_latipinna
ENSSDUG00000002832	-	97	73.109	ENSPMEG00000017685	-	93	73.109	Poecilia_mexicana
ENSSDUG00000002832	-	96	36.975	ENSPMEG00000022744	-	82	36.975	Poecilia_mexicana
ENSSDUG00000002832	-	97	73.950	ENSPREG00000014632	-	93	73.950	Poecilia_reticulata
ENSSDUG00000002832	-	85	70.192	ENSPREG00000014622	-	80	70.192	Poecilia_reticulata
ENSSDUG00000002832	-	91	37.719	ENSPREG00000012416	-	75	37.719	Poecilia_reticulata
ENSSDUG00000002832	-	91	65.766	ENSPNYG00000020476	-	91	65.766	Pundamilia_nyererei
ENSSDUG00000002832	-	94	43.966	ENSPNAG00000011049	-	80	43.966	Pygocentrus_nattereri
ENSSDUG00000002832	-	94	43.103	ENSPNAG00000011037	-	80	43.103	Pygocentrus_nattereri
ENSSDUG00000002832	-	89	31.858	ENSRNOG00000025625	Rnase4	74	31.858	Rattus_norvegicus
ENSSDUG00000002832	-	90	31.624	ENSSBOG00000033190	RNASE4	72	31.624	Saimiri_boliviensis_boliviensis
ENSSDUG00000002832	-	91	38.596	ENSSFOG00015002590	-	91	38.596	Scleropages_formosus
ENSSDUG00000002832	-	97	45.968	ENSSFOG00015001739	rnasel2	95	45.968	Scleropages_formosus
ENSSDUG00000002832	-	91	44.737	ENSSFOG00015002638	-	84	44.737	Scleropages_formosus
ENSSDUG00000002832	-	93	38.462	ENSSFOG00015008105	-	90	38.462	Scleropages_formosus
ENSSDUG00000002832	-	91	40.870	ENSSFOG00015018033	-	87	40.870	Scleropages_formosus
ENSSDUG00000002832	-	97	97.458	ENSSLDG00000024549	-	93	97.458	Seriola_lalandi_dorsalis
ENSSDUG00000002832	-	95	36.441	ENSSPUG00000001265	-	76	36.441	Sphenodon_punctatus
ENSSDUG00000002832	-	95	36.134	ENSSPUG00000001251	-	73	36.134	Sphenodon_punctatus
ENSSDUG00000002832	-	91	34.188	ENSSPUG00000000297	-	78	34.188	Sphenodon_punctatus
ENSSDUG00000002832	-	92	39.130	ENSXCOG00000020580	-	71	39.130	Xiphophorus_couchianus
ENSSDUG00000002832	-	93	68.142	ENSXCOG00000003090	-	91	68.142	Xiphophorus_couchianus
ENSSDUG00000002832	-	93	67.257	ENSXMAG00000019593	-	91	67.257	Xiphophorus_maculatus