EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSSDUG00000002987 (Gene tree)
Gene ID: 111235520
Gene Symbol: -
Alias: -
Full Name: histone-lysine N-methyltransferase SETDB2-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Plus strand
Length: 4085 bases
Position: chrBDQW01000513.1:495854-499938
Accession: 111235520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000003977	MBD	PF01429.19	8.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000004061	-	2039	XM_022763977	ENSSDUP00000003977	667 (aa)	XP_022619698	UPI000BBEC049

Gene Model

Click here to download ENSSDUG00000002987's gene model file

Pathways

Pathway ID	Pathway Name	Source
sdu00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000002987's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000002987	-	74	52.874	ENSG00000136169	SETDB2	67	52.874	Homo_sapiens
ENSSDUG00000002987	-	72	61.605	ENSAPOG00000020220	-	98	62.687	Acanthochromis_polyacanthus
ENSSDUG00000002987	-	93	60.674	ENSACIG00000009349	-	93	58.909	Amphilophus_citrinellus
ENSSDUG00000002987	-	98	67.933	ENSAOCG00000006560	-	99	67.629	Amphiprion_ocellaris
ENSSDUG00000002987	-	76	58.904	ENSAPEG00000009529	-	93	71.429	Amphiprion_percula
ENSSDUG00000002987	-	95	65.258	ENSATEG00000008915	-	99	64.567	Anabas_testudineus
ENSSDUG00000002987	-	93	32.756	ENSAPLG00000009061	SETDB2	72	54.651	Anas_platyrhynchos
ENSSDUG00000002987	-	74	53.571	ENSACAG00000014036	SETDB2	68	52.941	Anolis_carolinensis
ENSSDUG00000002987	-	56	54.023	ENSANAG00000028107	SETDB2	56	54.023	Aotus_nancymaae
ENSSDUG00000002987	-	99	66.717	ENSACLG00000004046	-	99	66.112	Astatotilapia_calliptera
ENSSDUG00000002987	-	94	40.795	ENSAMXG00000016092	setdb2	76	44.403	Astyanax_mexicanus
ENSSDUG00000002987	-	93	51.485	ENSBTAG00000007329	SETDB2	67	55.952	Bos_taurus
ENSSDUG00000002987	-	74	54.023	ENSCJAG00000008864	SETDB2	67	54.023	Callithrix_jacchus
ENSSDUG00000002987	-	92	52.874	ENSCAFG00000004341	SETDB2	50	52.874	Canis_familiaris
ENSSDUG00000002987	-	92	52.874	ENSCAFG00020020283	SETDB2	68	52.874	Canis_lupus_dingo
ENSSDUG00000002987	-	74	54.023	ENSCHIG00000014895	SETDB2	67	54.023	Capra_hircus
ENSSDUG00000002987	-	77	48.077	ENSTSYG00000014051	SETDB2	67	51.724	Carlito_syrichta
ENSSDUG00000002987	-	63	31.507	ENSCAPG00000014168	-	89	30.269	Cavia_aperea
ENSSDUG00000002987	-	65	61.290	ENSCPOG00000002194	SETDB2	62	61.290	Cavia_porcellus
ENSSDUG00000002987	-	74	54.023	ENSCCAG00000031604	SETDB2	67	54.023	Cebus_capucinus
ENSSDUG00000002987	-	74	52.874	ENSCATG00000002055	SETDB2	68	52.874	Cercocebus_atys
ENSSDUG00000002987	-	74	53.488	ENSCLAG00000007348	SETDB2	67	53.488	Chinchilla_lanigera
ENSSDUG00000002987	-	77	49.038	ENSCSAG00000017713	SETDB2	67	52.874	Chlorocebus_sabaeus
ENSSDUG00000002987	-	61	35.681	ENSCPBG00000008524	SETDB2	52	34.112	Chrysemys_picta_bellii
ENSSDUG00000002987	-	74	36.782	ENSCANG00000033506	SETDB2	67	36.782	Colobus_angolensis_palliatus
ENSSDUG00000002987	-	74	56.818	ENSCGRG00001011194	Setdb2	67	56.818	Cricetulus_griseus_chok1gshd
ENSSDUG00000002987	-	74	56.818	ENSCGRG00000000801	Setdb2	67	56.818	Cricetulus_griseus_crigri
ENSSDUG00000002987	-	97	60.185	ENSCVAG00000004116	-	98	58.642	Cyprinodon_variegatus
ENSSDUG00000002987	-	66	62.667	ENSDARG00000101462	setdb2	59	62.667	Danio_rerio
ENSSDUG00000002987	-	74	50.575	ENSDNOG00000033679	SETDB2	67	50.575	Dasypus_novemcinctus
ENSSDUG00000002987	-	85	54.651	ENSDORG00000026163	Setdb2	76	54.651	Dipodomys_ordii
ENSSDUG00000002987	-	65	51.613	ENSETEG00000004821	SETDB2	59	51.613	Echinops_telfairi
ENSSDUG00000002987	-	76	50.962	ENSEASG00005017285	SETDB2	67	54.023	Equus_asinus_asinus
ENSSDUG00000002987	-	76	50.962	ENSECAG00000020357	SETDB2	67	54.023	Equus_caballus
ENSSDUG00000002987	-	74	55.172	ENSEEUG00000011247	SETDB2	50	55.172	Erinaceus_europaeus
ENSSDUG00000002987	-	96	47.690	ENSELUG00000024242	-	96	47.754	Esox_lucius
ENSSDUG00000002987	-	74	52.874	ENSFCAG00000012034	SETDB2	67	52.874	Felis_catus
ENSSDUG00000002987	-	77	53.261	ENSFALG00000008379	SETDB2	69	53.261	Ficedula_albicollis
ENSSDUG00000002987	-	93	51.064	ENSGALG00000017006	SETDB2	67	50.526	Gallus_gallus
ENSSDUG00000002987	-	97	61.153	ENSGAFG00000000077	-	99	60.121	Gambusia_affinis
ENSSDUG00000002987	-	96	57.585	ENSGACG00000015463	-	84	76.316	Gasterosteus_aculeatus
ENSSDUG00000002987	-	75	49.462	ENSGAGG00000014099	SETDB2	65	49.462	Gopherus_agassizii
ENSSDUG00000002987	-	74	52.874	ENSGGOG00000016016	SETDB2	68	52.874	Gorilla_gorilla
ENSSDUG00000002987	-	99	66.717	ENSHBUG00000001477	-	99	66.112	Haplochromis_burtoni
ENSSDUG00000002987	-	74	52.874	ENSHGLG00000003820	SETDB2	67	52.874	Heterocephalus_glaber_female
ENSSDUG00000002987	-	74	52.874	ENSHGLG00100008642	SETDB2	67	52.874	Heterocephalus_glaber_male
ENSSDUG00000002987	-	95	53.292	ENSHCOG00000007071	-	87	59.109	Hippocampus_comes
ENSSDUG00000002987	-	94	40.693	ENSIPUG00000011157	setdb2	86	45.420	Ictalurus_punctatus
ENSSDUG00000002987	-	87	48.077	ENSSTOG00000002985	SETDB2	68	52.874	Ictidomys_tridecemlineatus
ENSSDUG00000002987	-	94	30.738	ENSJJAG00000011079	Setdb2	52	54.545	Jaculus_jaculus
ENSSDUG00000002987	-	98	66.156	ENSKMAG00000012100	-	99	65.496	Kryptolebias_marmoratus
ENSSDUG00000002987	-	80	44.697	ENSLACG00000009640	SETDB2	68	43.750	Latimeria_chalumnae
ENSSDUG00000002987	-	93	36.873	ENSLOCG00000009739	-	96	35.111	Lepisosteus_oculatus
ENSSDUG00000002987	-	74	54.651	ENSLAFG00000012612	SETDB2	69	54.651	Loxodonta_africana
ENSSDUG00000002987	-	74	52.874	ENSMFAG00000032631	SETDB2	67	52.874	Macaca_fascicularis
ENSSDUG00000002987	-	74	52.874	ENSMMUG00000013473	SETDB2	68	52.874	Macaca_mulatta
ENSSDUG00000002987	-	74	52.874	ENSMNEG00000037148	SETDB2	67	52.874	Macaca_nemestrina
ENSSDUG00000002987	-	74	52.874	ENSMLEG00000043613	SETDB2	67	52.874	Mandrillus_leucophaeus
ENSSDUG00000002987	-	99	68.468	ENSMAMG00000022781	-	99	67.270	Mastacembelus_armatus
ENSSDUG00000002987	-	99	66.717	ENSMZEG00005012098	-	99	66.112	Maylandia_zebra
ENSSDUG00000002987	-	75	52.128	ENSMGAG00000015017	SETDB2	70	51.579	Meleagris_gallopavo
ENSSDUG00000002987	-	76	53.846	ENSMAUG00000012871	Setdb2	69	55.208	Mesocricetus_auratus
ENSSDUG00000002987	-	77	50.000	ENSMICG00000012641	SETDB2	67	54.118	Microcebus_murinus
ENSSDUG00000002987	-	74	55.682	ENSMOCG00000021987	Setdb2	75	40.361	Microtus_ochrogaster
ENSSDUG00000002987	-	69	61.728	ENSMMOG00000013334	-	95	60.606	Mola_mola
ENSSDUG00000002987	-	74	55.814	ENSMODG00000010929	SETDB2	66	55.814	Monodelphis_domestica
ENSSDUG00000002987	-	99	71.917	ENSMALG00000001256	-	99	70.509	Monopterus_albus
ENSSDUG00000002987	-	76	54.545	MGP_CAROLIEiJ_G0019367	Setdb2	68	54.545	Mus_caroli
ENSSDUG00000002987	-	76	53.409	ENSMUSG00000071350	Setdb2	68	53.409	Mus_musculus
ENSSDUG00000002987	-	74	54.545	MGP_PahariEiJ_G0030385	Setdb2	68	54.545	Mus_pahari
ENSSDUG00000002987	-	76	54.545	MGP_SPRETEiJ_G0020259	Setdb2	68	54.545	Mus_spretus
ENSSDUG00000002987	-	76	49.038	ENSMPUG00000018019	SETDB2	67	51.724	Mustela_putorius_furo
ENSSDUG00000002987	-	73	54.651	ENSMLUG00000004378	SETDB2	66	54.651	Myotis_lucifugus
ENSSDUG00000002987	-	74	54.545	ENSNGAG00000013911	Setdb2	68	54.545	Nannospalax_galili
ENSSDUG00000002987	-	70	68.817	ENSNBRG00000022486	-	95	68.548	Neolamprologus_brichardi
ENSSDUG00000002987	-	74	52.874	ENSNLEG00000003613	SETDB2	67	52.874	Nomascus_leucogenys
ENSSDUG00000002987	-	58	50.962	ENSMEUG00000005220	-	52	54.545	Notamacropus_eugenii
ENSSDUG00000002987	-	94	63.108	ENSONIG00000009000	-	99	62.794	Oreochromis_niloticus
ENSSDUG00000002987	-	80	51.695	ENSOANG00000015546	SETDB2	68	51.695	Ornithorhynchus_anatinus
ENSSDUG00000002987	-	74	53.409	ENSOCUG00000003755	SETDB2	68	53.409	Oryctolagus_cuniculus
ENSSDUG00000002987	-	96	61.682	ENSORLG00000001147	-	96	61.215	Oryzias_latipes
ENSSDUG00000002987	-	96	61.586	ENSORLG00020006680	-	96	61.120	Oryzias_latipes_hni
ENSSDUG00000002987	-	97	62.133	ENSORLG00015009952	-	98	61.669	Oryzias_latipes_hsok
ENSSDUG00000002987	-	80	45.312	ENSOGAG00000005339	SETDB2	68	54.023	Otolemur_garnettii
ENSSDUG00000002987	-	82	54.023	ENSOARG00000008487	SETDB2	67	54.023	Ovis_aries
ENSSDUG00000002987	-	74	52.874	ENSPPAG00000039854	SETDB2	68	52.874	Pan_paniscus
ENSSDUG00000002987	-	76	50.000	ENSPPRG00000000069	SETDB2	67	52.874	Panthera_pardus
ENSSDUG00000002987	-	76	50.000	ENSPTIG00000006314	SETDB2	67	52.874	Panthera_tigris_altaica
ENSSDUG00000002987	-	74	52.874	ENSPTRG00000005873	SETDB2	68	52.874	Pan_troglodytes
ENSSDUG00000002987	-	74	52.874	ENSPANG00000017051	SETDB2	67	52.874	Papio_anubis
ENSSDUG00000002987	-	95	41.441	ENSPKIG00000009795	-	76	45.455	Paramormyrops_kingsleyae
ENSSDUG00000002987	-	94	30.066	ENSPSIG00000002200	SETDB2	63	48.913	Pelodiscus_sinensis
ENSSDUG00000002987	-	74	55.814	ENSPCIG00000002912	SETDB2	66	55.814	Phascolarctos_cinereus
ENSSDUG00000002987	-	97	62.080	ENSPFOG00000006673	-	98	61.468	Poecilia_formosa
ENSSDUG00000002987	-	97	62.500	ENSPLAG00000016914	-	98	61.621	Poecilia_latipinna
ENSSDUG00000002987	-	97	62.348	ENSPMEG00000003842	-	98	61.468	Poecilia_mexicana
ENSSDUG00000002987	-	97	60.856	ENSPREG00000022531	-	98	60.092	Poecilia_reticulata
ENSSDUG00000002987	-	74	51.724	ENSPPYG00000005368	SETDB2	67	51.724	Pongo_abelii
ENSSDUG00000002987	-	67	50.000	ENSPCOG00000017644	SETDB2	54	52.688	Propithecus_coquereli
ENSSDUG00000002987	-	83	68.421	ENSPNYG00000023676	-	96	68.421	Pundamilia_nyererei
ENSSDUG00000002987	-	95	41.185	ENSPNAG00000011459	setdb2	99	39.943	Pygocentrus_nattereri
ENSSDUG00000002987	-	87	49.515	ENSRNOG00000021680	Setdb2	68	53.409	Rattus_norvegicus
ENSSDUG00000002987	-	74	52.874	ENSRBIG00000006562	SETDB2	67	52.874	Rhinopithecus_bieti
ENSSDUG00000002987	-	74	52.874	ENSRROG00000032499	SETDB2	68	52.874	Rhinopithecus_roxellana
ENSSDUG00000002987	-	77	50.962	ENSSBOG00000023249	SETDB2	67	54.545	Saimiri_boliviensis_boliviensis
ENSSDUG00000002987	-	94	55.682	ENSSHAG00000007281	SETDB2	66	56.977	Sarcophilus_harrisii
ENSSDUG00000002987	-	94	37.759	ENSSFOG00015008204	-	75	41.989	Scleropages_formosus
ENSSDUG00000002987	-	77	68.147	ENSSMAG00000000035	-	99	68.147	Scophthalmus_maximus
ENSSDUG00000002987	-	100	96.148	ENSSLDG00000015081	-	100	96.148	Seriola_lalandi_dorsalis
ENSSDUG00000002987	-	88	51.042	ENSSARG00000009926	SETDB2	68	51.042	Sorex_araneus
ENSSDUG00000002987	-	90	69.868	ENSSPAG00000006869	-	100	69.536	Stegastes_partitus
ENSSDUG00000002987	-	73	53.488	ENSSSCG00000009395	SETDB2	67	53.488	Sus_scrofa
ENSSDUG00000002987	-	74	50.962	ENSTTRG00000012932	SETDB2	65	54.651	Tursiops_truncatus
ENSSDUG00000002987	-	94	49.038	ENSUMAG00000018406	SETDB2	67	51.724	Ursus_maritimus
ENSSDUG00000002987	-	76	50.000	ENSVPAG00000012019	SETDB2	67	55.172	Vicugna_pacos
ENSSDUG00000002987	-	74	59.091	ENSXETG00000015666	setdb2	50	59.091	Xenopus_tropicalis
ENSSDUG00000002987	-	96	58.295	ENSXMAG00000006323	-	95	56.347	Xiphophorus_maculatus