EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSDUG00000003213 (Gene tree)
Gene ID: 111225829
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: stress-induced-phosphoprotein 1-like
Gene Type: protein_coding
Species: Seriola_dumerili
Status: putative
Strand: Minus strand
Length: 13354 bases
Position: chrBDQW01000149.1:1216201-1229554
Accession: 111225829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSDUP00000004308	RRM_1	PF00076.22	4.1e-11	1	1
ENSSDUP00000004276	RRM_1	PF00076.22	4.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSDUT00000004403	-	5817	-	ENSSDUP00000004308	610 (aa)	-	-
ENSSDUT00000004371	-	5946	XM_022750863	ENSSDUP00000004276	653 (aa)	XP_022606584	UPI000BBEC8E9

Gene Model

Click here to download ENSSDUG00000003213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSDUG00000003213's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSDUG00000003213	si:dkey-33c12.4	57	34.078	ENSSDUG00000008651	zgc:123010	58	34.078
ENSSDUG00000003213	si:dkey-33c12.4	58	32.172	ENSSDUG00000014026	-	62	32.172
ENSSDUG00000003213	si:dkey-33c12.4	63	43.032	ENSSDUG00000010976	-	67	41.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSDUG00000003213	si:dkey-33c12.4	99	65.913	ENSAPOG00000005058	si:dkey-33c12.4	99	65.913	Acanthochromis_polyacanthus
ENSSDUG00000003213	si:dkey-33c12.4	51	43.505	ENSAPOG00000022403	-	63	39.723	Acanthochromis_polyacanthus
ENSSDUG00000003213	si:dkey-33c12.4	57	32.410	ENSAPOG00000019633	zgc:123010	58	33.240	Acanthochromis_polyacanthus
ENSSDUG00000003213	si:dkey-33c12.4	98	65.798	ENSAOCG00000020066	si:dkey-33c12.4	96	66.564	Amphiprion_ocellaris
ENSSDUG00000003213	si:dkey-33c12.4	51	44.880	ENSAOCG00000000431	-	70	39.040	Amphiprion_ocellaris
ENSSDUG00000003213	si:dkey-33c12.4	57	32.410	ENSAOCG00000005910	zgc:123010	58	33.240	Amphiprion_ocellaris
ENSSDUG00000003213	si:dkey-33c12.4	57	32.410	ENSAPEG00000014305	zgc:123010	62	33.240	Amphiprion_percula
ENSSDUG00000003213	si:dkey-33c12.4	51	44.214	ENSAPEG00000023603	-	71	38.636	Amphiprion_percula
ENSSDUG00000003213	si:dkey-33c12.4	59	33.773	ENSATEG00000022160	-	60	42.038	Anabas_testudineus
ENSSDUG00000003213	si:dkey-33c12.4	100	67.727	ENSATEG00000018885	si:dkey-33c12.4	100	68.485	Anabas_testudineus
ENSSDUG00000003213	si:dkey-33c12.4	59	43.299	ENSATEG00000018302	-	75	40.408	Anabas_testudineus
ENSSDUG00000003213	si:dkey-33c12.4	57	34.254	ENSATEG00000001220	zgc:123010	59	34.254	Anabas_testudineus
ENSSDUG00000003213	si:dkey-33c12.4	99	65.309	ENSACLG00000014192	si:dkey-33c12.4	99	64.431	Astatotilapia_calliptera
ENSSDUG00000003213	si:dkey-33c12.4	57	32.133	ENSACLG00000010188	zgc:123010	65	31.362	Astatotilapia_calliptera
ENSSDUG00000003213	si:dkey-33c12.4	54	43.143	ENSACLG00000003019	-	74	40.336	Astatotilapia_calliptera
ENSSDUG00000003213	si:dkey-33c12.4	96	39.571	ENSAMXG00000010871	si:dkey-33c12.4	98	39.204	Astyanax_mexicanus
ENSSDUG00000003213	si:dkey-33c12.4	61	31.579	ENSAMXG00000041967	zgc:123010	60	31.565	Astyanax_mexicanus
ENSSDUG00000003213	si:dkey-33c12.4	90	31.972	ENSCPBG00000024454	-	60	33.634	Chrysemys_picta_bellii
ENSSDUG00000003213	si:dkey-33c12.4	80	37.828	ENSCSEG00000002755	-	70	41.981	Cynoglossus_semilaevis
ENSSDUG00000003213	si:dkey-33c12.4	99	58.769	ENSCVAG00000006564	-	99	59.077	Cyprinodon_variegatus
ENSSDUG00000003213	si:dkey-33c12.4	63	40.097	ENSCVAG00000004187	-	73	38.958	Cyprinodon_variegatus
ENSSDUG00000003213	si:dkey-33c12.4	62	33.162	ENSCVAG00000013288	zgc:123010	65	33.077	Cyprinodon_variegatus
ENSSDUG00000003213	si:dkey-33c12.4	96	38.710	ENSDARG00000057890	si:dkey-33c12.4	97	37.366	Danio_rerio
ENSSDUG00000003213	si:dkey-33c12.4	88	35.572	ENSELUG00000001633	-	71	35.611	Esox_lucius
ENSSDUG00000003213	si:dkey-33c12.4	96	39.970	ENSELUG00000002009	si:dkey-33c12.4	97	38.323	Esox_lucius
ENSSDUG00000003213	si:dkey-33c12.4	61	33.247	ENSELUG00000022008	zgc:123010	73	42.331	Esox_lucius
ENSSDUG00000003213	si:dkey-33c12.4	63	40.000	ENSFHEG00000009983	-	65	40.000	Fundulus_heteroclitus
ENSSDUG00000003213	si:dkey-33c12.4	62	30.711	ENSFHEG00000002306	zgc:123010	64	31.620	Fundulus_heteroclitus
ENSSDUG00000003213	si:dkey-33c12.4	99	62.957	ENSFHEG00000005521	si:dkey-33c12.4	99	63.872	Fundulus_heteroclitus
ENSSDUG00000003213	si:dkey-33c12.4	61	30.990	ENSGMOG00000018473	zgc:123010	88	31.250	Gadus_morhua
ENSSDUG00000003213	si:dkey-33c12.4	51	40.705	ENSGMOG00000001292	-	100	40.705	Gadus_morhua
ENSSDUG00000003213	si:dkey-33c12.4	85	30.593	ENSGALG00000036747	TTC31	51	35.274	Gallus_gallus
ENSSDUG00000003213	si:dkey-33c12.4	51	42.988	ENSGAFG00000016594	-	74	37.422	Gambusia_affinis
ENSSDUG00000003213	si:dkey-33c12.4	62	31.633	ENSGAFG00000009373	zgc:123010	63	37.688	Gambusia_affinis
ENSSDUG00000003213	si:dkey-33c12.4	99	61.305	ENSGAFG00000017596	si:dkey-33c12.4	99	61.970	Gambusia_affinis
ENSSDUG00000003213	si:dkey-33c12.4	62	62.269	ENSGACG00000004936	-	100	62.533	Gasterosteus_aculeatus
ENSSDUG00000003213	si:dkey-33c12.4	62	31.378	ENSGACG00000007620	zgc:123010	90	31.378	Gasterosteus_aculeatus
ENSSDUG00000003213	si:dkey-33c12.4	99	66.012	ENSHBUG00000010735	si:dkey-33c12.4	99	65.913	Haplochromis_burtoni
ENSSDUG00000003213	si:dkey-33c12.4	96	40.735	ENSIPUG00000005998	si:dkey-33c12.4	98	40.582	Ictalurus_punctatus
ENSSDUG00000003213	si:dkey-33c12.4	99	61.774	ENSKMAG00000016610	si:dkey-33c12.4	99	61.796	Kryptolebias_marmoratus
ENSSDUG00000003213	si:dkey-33c12.4	68	40.235	ENSKMAG00000006468	-	72	40.481	Kryptolebias_marmoratus
ENSSDUG00000003213	si:dkey-33c12.4	57	32.410	ENSKMAG00000021350	zgc:123010	78	30.303	Kryptolebias_marmoratus
ENSSDUG00000003213	si:dkey-33c12.4	57	42.204	ENSLBEG00000028046	-	56	42.318	Labrus_bergylta
ENSSDUG00000003213	si:dkey-33c12.4	100	62.064	ENSLBEG00000021088	-	100	62.256	Labrus_bergylta
ENSSDUG00000003213	si:dkey-33c12.4	57	34.358	ENSLBEG00000023984	zgc:123010	59	33.983	Labrus_bergylta
ENSSDUG00000003213	si:dkey-33c12.4	91	61.960	ENSLBEG00000017203	-	99	62.706	Labrus_bergylta
ENSSDUG00000003213	si:dkey-33c12.4	50	40.602	ENSLACG00000009001	zgc:123010	70	40.602	Latimeria_chalumnae
ENSSDUG00000003213	si:dkey-33c12.4	94	31.879	ENSLACG00000004602	-	92	32.790	Latimeria_chalumnae
ENSSDUG00000003213	si:dkey-33c12.4	89	39.356	ENSLOCG00000001861	-	91	38.179	Lepisosteus_oculatus
ENSSDUG00000003213	si:dkey-33c12.4	57	30.387	ENSLOCG00000008967	zgc:123010	61	32.782	Lepisosteus_oculatus
ENSSDUG00000003213	si:dkey-33c12.4	99	74.752	ENSMAMG00000000111	si:dkey-33c12.4	100	73.404	Mastacembelus_armatus
ENSSDUG00000003213	si:dkey-33c12.4	84	35.970	ENSMAMG00000004311	-	68	39.578	Mastacembelus_armatus
ENSSDUG00000003213	si:dkey-33c12.4	58	32.162	ENSMAMG00000001145	zgc:123010	76	32.432	Mastacembelus_armatus
ENSSDUG00000003213	si:dkey-33c12.4	99	65.611	ENSMZEG00005014276	si:dkey-33c12.4	99	65.611	Maylandia_zebra
ENSSDUG00000003213	si:dkey-33c12.4	57	32.133	ENSMZEG00005027733	zgc:123010	65	31.362	Maylandia_zebra
ENSSDUG00000003213	si:dkey-33c12.4	64	41.404	ENSMZEG00005000585	-	74	39.916	Maylandia_zebra
ENSSDUG00000003213	si:dkey-33c12.4	56	30.114	ENSMMOG00000010544	zgc:123010	64	30.372	Mola_mola
ENSSDUG00000003213	si:dkey-33c12.4	92	35.580	ENSMALG00000003167	-	69	39.076	Monopterus_albus
ENSSDUG00000003213	si:dkey-33c12.4	57	33.241	ENSMALG00000017698	zgc:123010	64	32.391	Monopterus_albus
ENSSDUG00000003213	si:dkey-33c12.4	100	71.581	ENSMALG00000002265	si:dkey-33c12.4	100	71.581	Monopterus_albus
ENSSDUG00000003213	si:dkey-33c12.4	59	61.773	ENSONIG00000012263	-	99	61.308	Oreochromis_niloticus
ENSSDUG00000003213	si:dkey-33c12.4	51	43.953	ENSONIG00000007538	-	93	42.857	Oreochromis_niloticus
ENSSDUG00000003213	si:dkey-33c12.4	52	32.704	ENSORLG00000007675	zgc:123010	56	32.704	Oryzias_latipes
ENSSDUG00000003213	si:dkey-33c12.4	99	50.460	ENSORLG00000029651	si:dkey-33c12.4	98	50.765	Oryzias_latipes
ENSSDUG00000003213	si:dkey-33c12.4	85	36.210	ENSORLG00000030385	-	70	36.306	Oryzias_latipes
ENSSDUG00000003213	si:dkey-33c12.4	52	33.019	ENSORLG00020003457	zgc:123010	56	33.019	Oryzias_latipes_hni
ENSSDUG00000003213	si:dkey-33c12.4	99	49.853	ENSORLG00020008750	si:dkey-33c12.4	98	49.854	Oryzias_latipes_hni
ENSSDUG00000003213	si:dkey-33c12.4	85	36.484	ENSORLG00015008400	-	70	36.617	Oryzias_latipes_hsok
ENSSDUG00000003213	si:dkey-33c12.4	61	32.031	ENSORLG00015008373	zgc:123010	64	32.199	Oryzias_latipes_hsok
ENSSDUG00000003213	si:dkey-33c12.4	74	30.297	ENSOMEG00000003408	zgc:123010	80	30.917	Oryzias_melastigma
ENSSDUG00000003213	si:dkey-33c12.4	86	36.900	ENSOMEG00000009428	-	64	39.294	Oryzias_melastigma
ENSSDUG00000003213	si:dkey-33c12.4	98	52.232	ENSOMEG00000008913	-	98	52.083	Oryzias_melastigma
ENSSDUG00000003213	si:dkey-33c12.4	97	38.424	ENSPKIG00000011819	-	66	41.794	Paramormyrops_kingsleyae
ENSSDUG00000003213	si:dkey-33c12.4	61	32.208	ENSPKIG00000015521	zgc:123010	71	32.461	Paramormyrops_kingsleyae
ENSSDUG00000003213	si:dkey-33c12.4	54	33.533	ENSPMAG00000004544	zgc:123010	98	33.533	Petromyzon_marinus
ENSSDUG00000003213	si:dkey-33c12.4	99	61.747	ENSPFOG00000009143	si:dkey-33c12.4	99	61.898	Poecilia_formosa
ENSSDUG00000003213	si:dkey-33c12.4	62	32.570	ENSPFOG00000001073	zgc:123010	65	32.737	Poecilia_formosa
ENSSDUG00000003213	si:dkey-33c12.4	51	44.073	ENSPFOG00000017092	-	85	40.094	Poecilia_formosa
ENSSDUG00000003213	si:dkey-33c12.4	62	32.570	ENSPLAG00000007711	zgc:123010	65	32.737	Poecilia_latipinna
ENSSDUG00000003213	si:dkey-33c12.4	96	62.090	ENSPLAG00000022537	si:dkey-33c12.4	99	62.246	Poecilia_latipinna
ENSSDUG00000003213	si:dkey-33c12.4	99	61.295	ENSPMEG00000015590	si:dkey-33c12.4	99	61.446	Poecilia_mexicana
ENSSDUG00000003213	si:dkey-33c12.4	62	32.570	ENSPMEG00000005092	zgc:123010	65	32.737	Poecilia_mexicana
ENSSDUG00000003213	si:dkey-33c12.4	51	43.598	ENSPMEG00000009905	-	66	40.610	Poecilia_mexicana
ENSSDUG00000003213	si:dkey-33c12.4	51	43.939	ENSPREG00000016861	-	77	37.938	Poecilia_reticulata
ENSSDUG00000003213	si:dkey-33c12.4	56	31.519	ENSPREG00000019587	zgc:123010	67	31.519	Poecilia_reticulata
ENSSDUG00000003213	si:dkey-33c12.4	58	31.267	ENSPNYG00000023304	-	78	31.267	Pundamilia_nyererei
ENSSDUG00000003213	si:dkey-33c12.4	99	65.762	ENSPNYG00000018262	si:dkey-33c12.4	99	65.762	Pundamilia_nyererei
ENSSDUG00000003213	si:dkey-33c12.4	64	41.404	ENSPNYG00000001047	-	66	42.105	Pundamilia_nyererei
ENSSDUG00000003213	si:dkey-33c12.4	57	31.025	ENSPNYG00000007893	zgc:123010	65	31.105	Pundamilia_nyererei
ENSSDUG00000003213	si:dkey-33c12.4	97	36.310	ENSPNAG00000018386	si:dkey-33c12.4	98	37.910	Pygocentrus_nattereri
ENSSDUG00000003213	si:dkey-33c12.4	62	30.233	ENSPNAG00000007579	zgc:123010	80	30.947	Pygocentrus_nattereri
ENSSDUG00000003213	si:dkey-33c12.4	94	36.709	ENSSFOG00015005186	-	97	37.246	Scleropages_formosus
ENSSDUG00000003213	si:dkey-33c12.4	65	41.627	ENSSFOG00015009199	-	64	41.627	Scleropages_formosus
ENSSDUG00000003213	si:dkey-33c12.4	61	31.443	ENSSFOG00015021394	zgc:123010	68	31.443	Scleropages_formosus
ENSSDUG00000003213	si:dkey-33c12.4	55	42.407	ENSSMAG00000010960	-	63	40.244	Scophthalmus_maximus
ENSSDUG00000003213	si:dkey-33c12.4	71	30.155	ENSSMAG00000002904	zgc:123010	75	31.084	Scophthalmus_maximus
ENSSDUG00000003213	si:dkey-33c12.4	99	70.310	ENSSMAG00000008147	si:dkey-33c12.4	99	69.461	Scophthalmus_maximus
ENSSDUG00000003213	si:dkey-33c12.4	100	98.009	ENSSLDG00000009448	si:dkey-33c12.4	100	98.009	Seriola_lalandi_dorsalis
ENSSDUG00000003213	si:dkey-33c12.4	64	42.512	ENSSLDG00000012846	-	70	41.743	Seriola_lalandi_dorsalis
ENSSDUG00000003213	si:dkey-33c12.4	57	34.078	ENSSLDG00000019386	zgc:123010	61	34.078	Seriola_lalandi_dorsalis
ENSSDUG00000003213	si:dkey-33c12.4	64	38.725	ENSSPAG00000004843	-	64	38.837	Stegastes_partitus
ENSSDUG00000003213	si:dkey-33c12.4	62	32.653	ENSSPAG00000013621	zgc:123010	65	32.653	Stegastes_partitus
ENSSDUG00000003213	si:dkey-33c12.4	99	70.287	ENSSPAG00000022577	-	99	70.287	Stegastes_partitus
ENSSDUG00000003213	si:dkey-33c12.4	63	58.568	ENSTRUG00000022374	si:dkey-33c12.4	91	47.713	Takifugu_rubripes
ENSSDUG00000003213	si:dkey-33c12.4	52	40.439	ENSTRUG00000000057	-	73	35.294	Takifugu_rubripes
ENSSDUG00000003213	si:dkey-33c12.4	62	32.143	ENSTRUG00000024824	zgc:123010	66	31.888	Takifugu_rubripes
ENSSDUG00000003213	si:dkey-33c12.4	57	56.034	ENSTNIG00000010542	-	93	55.966	Tetraodon_nigroviridis
ENSSDUG00000003213	si:dkey-33c12.4	56	32.295	ENSTNIG00000001303	zgc:123010	91	32.295	Tetraodon_nigroviridis
ENSSDUG00000003213	si:dkey-33c12.4	54	30.723	ENSXETG00000033896	-	95	30.723	Xenopus_tropicalis
ENSSDUG00000003213	si:dkey-33c12.4	56	33.427	ENSXCOG00000012281	zgc:123010	72	33.427	Xiphophorus_couchianus
ENSSDUG00000003213	si:dkey-33c12.4	99	62.100	ENSXMAG00000018535	si:dkey-33c12.4	99	62.310	Xiphophorus_maculatus
ENSSDUG00000003213	si:dkey-33c12.4	61	32.642	ENSXMAG00000002598	zgc:123010	63	32.812	Xiphophorus_maculatus